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Nme (Nucleoside Disphophate Kinase)

Organism
Dicentrarchus labrax (European sea bass)
Phylogeny
Paralogs
Sequencing Methods
Nme2a: The gene is assembled from the accession numbers: FM009187, FL485718, CV186258, FP242637, FM024301.

Nme2b: Illumina paired end technology
Citations
  • Sarropoulou E., Sepulcre P., Poisa-Beiro L., Mulero V., Meseguer J., Figueras A., Novoa B., Terzoglou V., Reinhardt R., Magoulas A., Kotoulas G. (2009). Profiling of infection specific mRNA transcripts of the European seabass Dicentrarchus labrax. BMC Genomics 10:157. doi: 10.1186/1471-2164-10-157.
  • Chini V., Rimoldi S., Terova G., Saroglia M., Rossi F., Bernardini G., Gornati R. (2006). EST-based identification of genes expressed in the liver of adult seabass (Dicentrarchus labrax, L.). Gene 376(1):102-6. doi: 10.1016/j.gene.2006.02.010.
  • Louro B, Passos AL, Souche EL, Tsigenopoulos C, Beck A, Lagnel J, Bonhomme F, Cancela L., Cerdà J., Clark MS., Lubzens E., Magoulas A., Planas JV., Volckaert FA.,Reinhardt R., Canario AV. (2010). Gilthead sea bream (Sparus auratus) and European seabass (Dicentrarchus labrax) expressed sequence tags: Characterization, tissue-specific expression and gene markers. Marine Genomics 3(3-4):179-91. doi: 10.1016/j.margen.2010.09.005.
  • Fish-it.org
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    Sequence >Contig Dicentrarchus labrax Nme2a
    ATGTCTGAACTGAAGGAGCGCACGTTCATTGCCATCAAGCCCGATGGCGTGCAGAGGGGCATCATCGGAGAGATAGTCAA
    GAGGTTCGAGGTGAAAGGCTTCAAACTCGTGGGCATGAAGATGCTCCATGCCTCTGAGGACCTCCTGATGCAGCACTACA
    TCGACCTGAAGGACAGACCATTCTTTCCTACCCTCATCAAATACATGAGCTCTGGTCCAGTTGTTGCCATGGTGTGGGAA
    GGCAAGGGTGCAGTGAAGACAGGCAGGGTGATGCTGGGCGAGACCAACCCTGCTGAGTCCAAGCCTGGAACCATCAGAGG
    AGACTTCTGTATCGACGTCAGCAAGAACATCATCCACGGCAGTGACTCAGTGGAAAGTGCCAACAAGGAGATTTCCCTGT
    GGTTCAAACCAGAAGAACTGGTCAGCTACACTAGCTGTGCCTTCAGCTGGCTCTACTAA
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    >tr_0118033|DLAgn_00213640 Dicentrarchus labrax Nme2b
    ATGGAGCGTACCTTCATTGCTGTGAAGCCCGATGGCGTCCAGAGAGGACTGTGTGGCGAGATCATCAAGCGCTTCGAGCA
    GAGAGGCTTCAGGCTGGTGGCTGCCAAATTCATGCAGGCATCTGAGGACCACATGAAGAACCACTACCTGGACCTGAAGG
    ACATGCCTTTCTATGGTGGACTCTGCAAATACATGTCCTCTGGACCCGTCCTCGCCATGGTGTGGGAGGGTCAGAGCATT
    GTGAAGCTGGTCAGGATGATGCTGGGTGAGACCAACCCTGCTGACTCCAAGCCTGGCAGCATCCGTGGAGACCTGTGCAT
    CAACATCGGCAGGAACATCATCCACGGCAGCGACACCCTGGAGAATGCCAAGAAGGAGGTCGACCTGTGGTTCAAGGCCG
    AGGAGTTCGTCGCCTACACCCCCTGCGGCCAGCCCTGGCTGTACGAG
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    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by Panagiota Goutakoli
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