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otx2 (Orthodenticle homeobox 2)

Organism
Fundulus heteroclitus (Mummichog)
GO term(s)
Molecular Function: GO:0003677, GO:0003700
Cellular Component: GO:0005634
Biological Process: GO:0007275
Paralogs
Sequencing Methods
otx2a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012234304.1) annotated using gene prediction method: Gnomon.

otx2b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012224404.1) annotated using gene prediction method: Gnomon.
Sequence >XM_012866652.1 Fundulus heteroclitus otx2a
ATGCGAGCGAGGACCCAAAATACCTTGGAGAAACAAAAGCCCGGGAAGGTGTACGAGGTCAGCGAGGAGCTCGGCGGAGA
GTCAGAACATGAGGTGGCCTTAAAGATCAATCTTCCTGAATCAAGAGTGCAGGTTTGGTTCAAAAACAGGCGAGCCAAAC
ACCGCCAGCAGGCCCAGCAGACGCAGACCGGCGCGCAGAGCAAGTCTGTCAGCAGGCCGGTGAAAAAGAAAGGCTCTCCG
GTCAGAGAGGCCAGCTCTGAGAGCGGAGCCAGCGGCCAGTTCACGCCGCCCTCCAGCACCTCCATCCCGGCGGCGAGCAG
CAGCAGCAACAGCGCGGCGCCCGCCTCCATCTGGAGCCCGGCCTCCATCTCCCCGCTCTCCGATCCGCTCTCCACAACAA
CCTCCTCCTCCTCCTCTTCCTCCTGCATGCAGCGCACATACCCGATGACCTACACCCAGGCCACGGGCTACAACCAGGGC
TACACGGGCTCCTCCTCCTACTTCACCGGGATGGACTGCGGCTCCTACCTGTCGCCGATGCACCACCAGCTGTCCGCCGC
GGGCTCCGCCATGAGCCCCATGGGCGGCGGCGGGGTGTCCAGCCACCTGAGTCCGGCGTCTTCGCTGTCTTCGCCGGCGT
ACGGGGCGGCGGGGCTCGGCTTCACCGGCTCCGCGGACTGTCTGGACTATAAGGACCAAGCTGCGTCGTCGTGGAAGCTC
AATTTCAACTCGGACTGTTTGGATTATAAAGACCAAGCAGCGTGGAAATTTCAAGTGTTGTGAGGGAAGACGAGCAGGAA
GAAGTGGAGAACTTTCATGAAGCCATGCAGAGCCGGCCTAAGATTGAATGGGGCCCTGAGCGGGATTTGATTTGGGGCGA
GAGGGGGGGC
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>XM_012852387.1 Fundulus heteroclitus otx2b
CACACAGCCTCCTCCGCAGCTCCGCCGCCGTCCGCGTCAGTTCAGAGCTCGATGCTGCGCTCACCGCTCAACTTTTATCT
CTGCCGTTGCTGTTCAGTTGAACGAGGCTGCTCCTGCTTGGCTTTTGGAGGTTTTCTCAATCGGACTCGTTGATTTCCGC
ACAGCTTTGGTTATTCCCCCCAAAGAGAGAGGAAGCGAGAAAAGAGAAGCAAATTCTACACCTAAATGCCAGGGTACCCG
GTGTAACACGGAGCCCACGGAGATCAGAGAGGACACGAGGGGCGCCTTTGGAGCGACATCAGTTTTCAAAATTTTCTCCA
ACTTCAGCCCTCAGACAAACATTAGCATGATGTCGTATCTAAAGCAACCACCTTACACAGTCAATGGCCTGAGCCTAACA
ACCTCCGGGATGGACCTTCTGCATCCATCAGTGGGTTATCCAGCCACGCCACGAAAACAGAGGCGAGAAAGGACTACTTT
TACGCGCGCACAGCTCGACGTTCTGGAGGCGTTGTTCGCCAAAACTAGGTACCCGGACATATTCATGCGCGAAGAGGTGG
CGCTGAAAATCAACTTACCTGAATCCAGAGTACAGGTTTGGTTTAAGAACCGGCGCGCCAAGTGTCGCCAGCAGCAGCAG
CAGCAACAGAACGGCGGGCAGAACAAGGTGCGACCCCCTAAAAAGAAAAGTTCTCCAACCAGGGAGGTGAGCTCGGAAAG
CGGAGCCAGCGGCCAGTTCACTCCCCCCACGAGCACCACCACGGTCCCCGCCATCTCCACCAGCACCGCCCCGGTGTCCA
TTTGGAGCCCCGCGTCCATCTCTCCTCTCTCGGACCCCCTGTCTACCTCCTCATCCTGCATGCAGCGGTCCTACCCCATG
ACCTACACTCAGGCATCGGGCTACAGCCAGGGCTACGCCGGGTCGACGTCCTACTTTGGGGGCATGGACTGCAGCTCTTA
CCTCACTCCAATGCATCACCAGCTGTCGGGGCCCGGCTCGACTCTCAGCCCGATGAGCACGAACGCGGTCACAAGCCATC
TGAACCAGTCCCCGGCGTCCCTCTCCGCCCAGGGCTACGGGACGTCCGGCCTGGGCTTCAACTCCACGGCAGACTGCCTG
GATTATAAGGACCAAGCGGCGTCGTGGAAGCTGAACTTCAATGCCGATTGCTTGGATTATAAGGATCAAACATCCTCGTG
GAAATTCCAGGTCCTGTGAACAGAGCAGCGACGATCACATGAGACGCAGTCCAGCCATCCTTCAATAAGACTCAACACTA
GACTGGTTGAGCCGCGCTGCGTTCTCTCCTCTTTTTTTTTTATCCCGGTGGTCTTCGGTACTCCTAAAGGAGAGGTTTAA
TTTATTTTAGCACTGGCATAGATTTCCCTCCCCGTTCATTCACACCCTGTAGCCCCTCATCCACCTCTATCATTGCGTGC
CTCTGTGCGTAAAAAAAGAACACCTGTTGAGGACAACCGCAGCCACGGAACGAACACTTCAGTGAGTCCCGCTGAAGTGC
AGACCTCTTTAAAAAAAATATGAACCTGCTGGCAGAGAGACATGAGGATACTGTGTGGACATGGATGCACTACTTTATTT
AAGAAAAAAAAGTGTTTATAAGGAATCAATATGTAGTTTCTAAGAGACAATCAGTGTGCGTCTTAAATAAATGGTACATA
GGTGTTTTTTTTATCTGTGATATAGCCTTCGAAACTGTGATCTGTTGTATTGTATGCAATTTGTGAGCCCCCCTCTCGCA
TCAGACTCTCTGCTGTGATTTTAATAAATTTCTAACTTTTTTCGGGGGTAGGGACAAAAATGGAGCTTAAAAAAAAGTAA
AATTCAAAGAGAGACAGAGACGAGACTTTTTTTTTTTTTTGGAGGCGCATTATTGAGGGTTGGGGCCATACTGGAAAAGA
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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