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otx2 (Orthodenticle homeobox 2)

Organism
Poecilia formosa (Amazon molly)
GO term(s)
Molecular Function: GO:0003677, GO:0003700
Cellular Component: GO:0005634
Biological Process: GO:0007275
Paralogs
Sequencing Methods
otx2a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006800260.1) annotated using gene prediction method: Gnomon.

otx2b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006799993.1) annotated using gene prediction method: Gnomon.
Sequence >XM_007573234.1 Poecilia formosa otx2a
ACGAGGTTATCCGGAAGGAAACAAATCAAAGCCGCTTGATGGGTCTATAAGCCCAACCAAAGGATCGTTTTATATAAACA
GAAGACTGAAATTCATCTGGACCATTTCAGAATTCGGAGACGCCAGTGGGGGGGAACGCTATTATTAATATTATTATTTG
CGCCATTTTCTTTACTACTTTTTGTGATCGGGGTTGCCGGAGGCAAACATGATGTCCTATTTGAAACAACCGCCGTACAC
GGTGAACGGACTGAGCTTATCTACCTCAGGAGTGGACTTACTGCATCCTTCAGTGGGATACCAAGCGACCCCTCGCAAGC
AGAGGAGGGAGCGGACCACCTTCACCCGGGCCCAGCTCGACGTGCTGGAGAACCTGTTCGCCAAGACCCGCTACCCTGAC
ATCTTCATGAGGGAAGAGGTGGCTTTAAAGATCAACCTCCCTGAATCCAGAGTGCAAGTCTGGTTTAAAAACAGACGAGC
CAAGCATCGCCAGCAGGCCCAGCAGACTCAGACGGGCGTGCAGAACAAGTCTGTCAGCAGGCCGGTGAAAAAGAAAGGCT
CCCCGGTCAGAGAGGCCAGCTCTGAGAGCGGAGCCAGCGGCCAGTTCACGCCGCCCTCCAGCACCTCCTTGCCGGCTGTG
AGCAGCACCAACAGCAGCACCAGCAACAGCAGCAGCAGCGCGGCGCCTGTCTCCATCTGGAGCCCGGCCTCCATCTCCCC
GCTCTCCGACCCGCTCTCCACCACACCCTCCTCCTCCTCTTCCTCCTGCATGCAGCGATCTTACCCGATGACCTACACCC
AGGCGACGGGCTACAACCAGGGCTACACGGGTTCCTCGTCCTACTTCACCGGGATGGACTGCGGCTCCTATCTGTCGCCC
ATGCACCACCAGCTGTCCGCCGCGGGCTCCACCATGAGCCCCATGGGCGGCAGCGGGGTGTCCAGCCACCTGAGTCCGGC
GTCCTCGCTCTCCTCGTCGGCGTACGGAGCGACGGGGCTCGGCTTCACCGGTGCGGCGGACTGTCTGGACTATAAGGACC
AAACTGCCTCATCGTGGAAGCTAAATTTCAATTCGGACTGTCTGGATTATAAAGACCAAGCAGCTTGGAAGTTTCAAGTG
TTGTGAGAGAAGAAAAATGGAAGAAATTGGGAACTTTTATGAACCCATGCAGAGCCGGTCTAAGACTGAATGCAGTCCTG
AGCGGAAATTGGCACCACCAGCAACCACACCACCACCTATATTAACTTATTGGGCTTTTTTTTTATTCCCAGTTACACAG
TTTGCTAACATAGCAGTTAGAATGATCATATCACACAATTATGATATAATATTTCACAATAAGTATTTAAATAAAGGGAT
ACCGAGAAGTAAAACCGTGGAGAAATCACTGGCCAAATTTAAAAGTTGGTTCATTTTTGATTAACAGCCATCTTTGGATC
TATGCTCTGTGTGGTGGCATGCTGGGGGGTCCTAAGCAGCGGTGTCTCGCTCTTGCCTTGACCCGGCTCTGCATTCATGC
AAAAATAAAGTTTCTTTCTTTTTTTTCTTCTCTCCACAAGAAATCAGGCCCTAACTTCTACCTCGGGTCGAGCAGCGCAG
GACTGTCTCACACTTGTTGGACTAACTTATTGACCATCGAGACTCAACTTTGATCAGGGGCACGGAACAAATCTGCTGAC
CAGAAAAGAAGAAGAGAGAAAAGGATCAAGAGAGACTAACTTGGAGGAGTTTGAAGGATTGGTCAGGTCTTTTTCCTGCT
AAGCTCCTTAAAGACTCTCCTTTTTCTTTTTCTTCTTGTTGGCACGCTGAATGGGCGCCCCTTTGATCAAAGCGATGTGC
ATGAGTGTCTGTGTTGTAAGGAGCGTGCGTGTGTGTGTGCGTGTGTGTGAGAGAGAGAGCGTTAAAGCAGCTCTGACGCG
AACTTGGATGCACTACTTAATTTATGGAAGAAGAAGAAAAATATACGAATATTTGACAATCAGTCTGTTCGCGCGTGAGC
CGAAATGTCTTTTATGTGTTTTAAAATGTTCATTTCTCCCCTTGTAAAATTTATTTTTACCCGACTTGTGATTTTTCTTG
TTGTTGTTGTTTTTTTGTATAACCTGTATGCAATTCTGCCTTGCGTAAAATACGCAGGAAAAGCAAGCTGTGAATTTCAC
ATTTTTATTTCCATGTTACCAGTGTTAACTAAAAGAAGGATTTTATTAGTTTTCATGATAAATCAGGAATAATTACAGTG
TGCGTCTTGCATTTGAAGGTCCATTCAAAACTGTAAAGAGCGACAAAACCCACTATGAAACAATAAAGGCCTTTTGACTC
AGA
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>XM_007553017.1 Poecilia formosa otx2b
CGGGCTCCCCATTGGCTGGCGGTTTGTACAAAATCTAACTCAAACCACTTCAGTCTGAACAAATCCTAAAGGCGCACACG
CAGCCTCCTCCGCAGCTCCACCGCCGCCTTTAGCGTCATTTCAGAGCCCGATGCTGCGCTCATCGCTCAACTTTTATCTG
TGCTGTTGTTCTCATCAGCTGGCTGAGGGAGGTTGCTCCTGCTTGGTTTTTGGAGATTTTGTGTATCGGACTCGTTGACT
TCTGCGCAGTTTTTTTTCTTTTGTTATTTCCTTCAAACAGAGGAAGCAAGAAAAAAAGAAGCAAATTCTACACCTAAATG
CCAAGGTACCCGGTGTAACACGGAGCCCACGGAGATCAGAGAGGACACGAGGGGCGCCTTCGGAGCGACATCAGTTTTCA
AAATTTTCTCCAACTTCAGCCCTCAGACAAACATTAGCATGATGTCGTATCTAAAGCAACCACCTTACACAGTCAATGGC
CTGAGCTTAACAACCTCCGGGATGGACCTTTTGCATCCATCAGTGGGTTATCCAGCCACGCCACGAAAACAGAGGCGAGA
AAGGACTACTTTTACGCGCGCACAGCTCGACGTTTTGGAGGCGTTGTTCGCCAAAACCAGGTACCCGGACATATTCATGC
GCGAAGAAGTGGCGCTGAAAATCAACTTACCTGAGTCCAGAGTACAGGTTTGGTTTAAGAACCGGCGGGCCAAGTGTCGC
CAGCAGCAGCAACAGCAACAGAACGGCGGACAAAACAAGGTGCGACCCCCTAAAAAGAAAAGTTCCCCAACCAGGGAGGT
GAGCTCGGAGAGCGGGGCCAGCGGCCAGTTCACGCCCCCCACTAGCACCACTACAGTCCCCGCCATCTCCACCAGCACCG
CCCCGGTGTCCATTTGGAGCCCCGCGTCTATTTCTCCTCTCTCGGACCCCCTGTCTACCTCCTCTTCCTGCATGCAGCGG
TCCTACCCCATGACCTACACTCAGGCCTCGGGCTACAGCCAGGGCTACGCCGGGTCGACGTCCTACTTCGGGGGCATGGA
CTGCAGCTCTTACCTCACTCCGATGCACCACCAGCTGTCGGGGCCCGGCTCGACTCTCAGCCCGATGAGCACGAACGCCG
TCACAAGCCATCTGAACCAGTCTCCGGCGTCCCTCTCTACCCAGGGCTACGGGACGTCCGGCCTGGGCTTCAACTCCACG
GCAGACTGCTTGGATTATAAGGACCAAGCGGCGTCATGGAAGCTGAACTTCAATGCCGATTGCTTGGATTATAAGGATCA
AACATCCTCATGGAAATTCCAGGTCCTGTGAACAGAGCAGTGACGATCACATGAGACGCAGTTCAGCCATCCTTCAATAA
AACTCAACATCAGACTGGTTGAGCCTGGCTGCGCTCTCCTTTTTTTTTTCTTTTTATCCCGGTGGTCTTCGGTACTCCTA
AAGGAGAGGTTTAATTTATTTTAGCGCTGGCATATAGATTCCCCC
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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