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otx2 (orthodenticle homeobox 2)

Organism
Stegastes partitus (Bicolor damselfish )
GO term(s)
Molecular Function: GO:0003677, GO:0003700
Cellular Component: GO:0005634
Biological Process: GO:0007275
Paralogs
Sequencing Methods
otx2a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007578134.1) annotated using gene prediction method: Gnomon.

otx2b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007577739.1) annotated using gene prediction method: Gnomon.
Sequence >XM_008285461.1 Stegastes partitus otx2a
ATGATGTCCTATTTGAAGCAACCGCCGTACACGGTGAACGGACTGAGCTTATCTACCTCAGGAGTGGACCTGCTGCATCC
TTCAGTGGGATATCAAGGGACCCCTCGCAAGCAGCGGCGGGAGAGGACGACCTTCACCCGGGCCCAGCTCGACGTGCTGG
AGAATCTGTTCGGCAAGACCCGGTACCCAGACATCTTCATGAGAGAGGAGGTGGCCTTAAAGATCAACCTGCCTGAATCC
AGAGTGCAAGTGTGGTTCAAAAACAGACGAGCCAAACACCGCCAGCAGGCCCAGCAGACCCAGAGCGGAGTGCAGAACAA
GCCCGTCAGCAGGCCGGTGAAGAAGAAGAGCTCCCCGATCCGAGAGGCCAGCTCAGAGAGCGGCGCCAGCGGCCAGTTCA
CGCCGCCCTCCAGCACCACCATCCCGCCTGTGAGCAGCAGCAGCAGCAACAGCAGCAGCGGCGGCAGCAGCGCGGCTCCC
GTGTCCATCTGGAGCCCGGCCTCCATCTCCCCGCTGGCCGACCCGCTGTCTACCTCCTCCTCCTCCTGCATGCAGCGCTC
CTACCCGATGACCTACACCCAGGCGACCGGCTACAACCAGGGCTACACGGGCTCCTCGTCCTACTTCACGGGCATGGACT
GCGGCTCTTACCTTTCGCCTATGCACCACCAGCTATCCGCCGCGGGCTCCGCCATGAGCCCCATGGGCAGCAACGGGGTC
TCCAGCCACCTGAGCCCGGCCTCCTCCCTCTCCTCGTCGGCGTACGGAGCGGCGGGACTGGGCTTCAGCGGCGCCGCAGA
CTGCCTGGACTATAAGGACCAAACGGCCTCTTCGTGGAAGCTCAATTTCAACGCGGACTGTTTGGATTACAAAGACCAGG
CAGCGTGGAAATTTCAAGTGTTGTGA
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or

>XM_008283329.1 Stegastes partitus otx2b
GAGATGTGGTTGGTGCTTTTCTGAGGAGCGCCATGCGCCTTGGAGAGCTCTTATTTCGCCACAGCGCCGAGTAAACACAG
CTAATATCACTTCACAAGGAGGCACGTCTTCACCAACATCTTCTTCTCCTCCTCCTCCTTTGGAACAGGTTCCCGGCACA
AGACGGAGCACACGGCGGGCAGAGGACACCACGTACACCTCGGGAGCTCCATCAGTTTTCAAAATTTTCTCCAACTTCAG
CCCTCAGACAAACATTAGCATGATGTCGTATCTAAAGCAACCACCTTACACAGTCAATGGACTCAGCTTAACTACTTCTG
GAATGGACCTTTTACATCCATCAGTGGGCTATCCAGCCACGCCACGGAAGCAGAGGCGAGAAAGGACTACTTTTACGCGC
GCACAGCTCGACGTTTTGGAGGCGTTGTTCGCCAAAACTCGGTATCCGGACATATTCATGCGCGAAGAGGTGGCGCTGAA
AATCAATCTACCTGAGTCCCGAGTACAGGTCTGGTTTAAGAACCGGCGAGCGAAGTGTCGCCAGCAGCAGCAGCAGCAGC
AGAACGGGGGCCAGAACAAGGTGCGACCTGCCAAAAAGAAAAGTTCTCCAACCAGAGAAGTGAGCTCGGAGAGCGGGGCC
AGCGGCCAGTTCACGCCCCCCACCAGCACCACCACAGTCCCCGCCATCTCCACCAGCACCGCCCCAGTGTCCATCTGGAG
TCCGGCGTCCATCTCTCCTCTCTCAGATCCCCTATCTACCTCCTCCTCCTGCATGCAGAGGTCCTACCCCATGACCTACA
CCCAGGCCTCGGGCTACAGCCAGGGCTACGCCGGGTCGACGTCCTACTTCGGGGGTATGGACTGCGGCTCTTACCTCACT
CCCATGCACCACCAGTTGTCAGGCCCGGGCTCGACTCTCAGTCCGATGAGCACAAACGCGGTCACAAGCCATCTGAACCA
GTCCCCGGCGTCCCTCTCCACCCAGGGCTACGGGACGTCCGGCCTGGGCTTCAACTCCACAGCAGACTGCTTGGATTATA
AGGACCAAGCGGCGTCGTGGAAGCTGAACTTCAATGCCGATTGCTTGGATTATAAGGATCAAACATCCTCGTGGAAATTC
CAGGTCCTGTGA
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or



Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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