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otx5 (Orthodenticle homeobox homolog 5)

Organism
Neolamprologus brichardi (Neolamprologus brichardi )
GO term(s)
Molecular Function: GO:0003677, GO:0043565, GO:00037000
Cellular Component: GO:0005634
Biological Process: GO:0032922
Paralogs
Sequencing Methods
otx5a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006272237.1) annotated using gene prediction method: Gnomon

otx5b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006272078.1) annotated using gene prediction method: Gnomon.
Sequence >XM_006808617.1 Neolamprologus brichardi otx5a
ATGGGTGTGAGTCCCAACCTGGCTGGTAGTTGGGGGCTGGAGGGCTGTTTAATGGCGTTCTGTGTGGAGCTGCTGGTGGC
ACCTGCCACTCCCAGGAAGCAGCGCAGGGAGCGCACCACCTTCACCCGCACACAGCTGGACATCCTGGAGGCGCTCTTCT
CAAAGACCCGCTACCCAGACATCTTCATGAGGGAGGAGGTGGCCCTCAAGATCAACCTGCCTGAGTCACGTGTCCAGGTT
TGGTTTAAAAACCGCCGTGCCAAGTGCCGCCAGCAGCAGCAGCAGAGCAGCGGCCAGTCCAAGCCCCGGCCTCCCAAAAA
GAAGGCCTCGCCAGCGCAGGAGCCTAGCGTTCCTGATCCCGTTCCTAACCCATCTGGCTCATTCAGCCCCTCCTCAGCCC
ATTCTGGCCCCAGCCTGGCCCCGAGCTCCAGCACCGGAAACACTGCCGTGTCCATCTGGAGCCCAGCCATCTCACCCCTG
CCAGACCCCTTGGCCTCCTCCTCGGCGCCCTGCATGCAGCGGCCCTCACCTTACCCTATGAGCTATGGCCAGCCGTCAGC
CTACACCCAGGGCTATGCTAGCACAACCTCCTACTTCACTGGCCTGGACTGCAGCGCCTATCTGTCCCCCATGCATTCAC
AGTTGTCAGGCACCGGAGGTGCTCTCAGCCCCATTGCTGTGCCCTCTATGGGGGGCTCCTTAAGCCAGTCCCCAGCATCT
CTGTCTTCACAGGGCTACAGCACTGCCTCTTCCCTGGGCTTCACCTCTGTCGACTGCCTGGACTACAAGGACCAGCAGGC
CTGGAAGCTGGGCTTCACCACAATGGATTGCCTGGATCACAAGGACCAAAACTCCTGGAAGTTCCAGGTTCTCTAGAAAG
GGTGTCAACATGCCACGTGCATCAGTGAATCCCATGTA
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>XM_006801132.1 Neolamprologus brichardi otx5b
CAACTGAAGAGTCCACCGTATCCAAACCGTGAACAGCGCGCCCACTGGAAGGCCTCCCACACACTGAGACAGCCACACAC
ACCTCAGCAGATCAGCATCCTCTTCTTCTCAGGGACGACCAGGGACAGAGGGGCGCCCCACCCGCCTTACAATTTTTCAA
CACCCGTCAGACCGCAGGCACCAAACTGCTGTGGAGCTGCCGCTGCTGCCGCTGCTTTTTGGCATCTTTCACCCGGCCAC
GTTATATGTGCGCACTGCAATTACGCACGGCTCTGATGGAGATTCTAACCGGCCTCGATTAGCGAACTGTGCTGTTTTCA
GTGTGGTGTATTGACTTGTCGCACCGGGCCGACTTGAGTTGAGGTAGTCTTTCTTTTTTTGACTAGAAGCATTGAACATA
CACCAAACCCTTAAAAGCGCCGTGGTTTTACGCGTCAGGTGGAAACAAACGTAAAGGGGCTTGGCCAAAGGTGCTTGGCT
CGAAGGCAGTAAGTCAGAGTAACGTATAAAGATAGTTGAGGAGAAGGCAGTCAATGGACAATTAAAAAACAAAAACAACC
TAAGGCCAAACATCCCACCAAAAGGAACAAACACTGTTAAAGGCAGTTAGAGGGAAAAGAGAGAGAGAGAGAGAGAGAGA
GAGGAGGGAGAGGGAAAGAGAGAGAGAGAGAGAGATACACCCCCTGGAGACTAGTTAGGAGACCCGGCCCCCGGTCTGAG
AGAAGGAGAGAGCGAGTGAGGGAGTGTTTTAAAGCCGGCAGGAGGCATGATGTCCTACATTAAGCAACCCCATTACGCCG
TGAACGGGTTAACGCTGTCCGGCCCGGGCATGGATCTGCTCCACACCGCCGCCGTTGGATATCCCAGCACACCCCGCAAA
CAGCGTCGGGAGCGCACGACTTTCACGCGTGCGCAGCTGGACATCCTGGAGGCTCTTTTTGCCAAAACACGCTACCCAGA
CATCTTCATGAGGGAGGAAGTGGCACTCAAGATCAACCTGCCTGAGTCCAGAGTCCAGGTCTGGTTCAAAAACCGTCGTG
CCAAGTGCCGCCAGCAGCAGCAACAGAGCACAGGCCAGTCCAAACCACGGCCCCCTAAAAAGAAGGCATCCCCTGCTCGT
GAGGCCAACACCGAGGCCAGTGCCAACCCCACCAACGGTCCCTACAGCCCTCCTCCCCCTCCTCCAGGCACCGCCATCAC
CCCCAGTTCCAGCTCTGCTAGTGCCACAGTGTCCATCTGGAGCCCAGCCTCGATCTCTCCGCTGCCAGACCCCCTGTCTG
CTTCCACCACCCCGTGCATGCAGCGTACCACCACCTACCCCATGACCTACACCCAGGCCCCAGCCTACAGCCAGAGCTAC
GCAGGCTCCTCCTCCTACTTCACTGGTCTGGACTGTAGCTCCTACCTGTCTCCAATGCACCCACAGCTGTCGGGGACCGG
AGGGGCCCTGAGCCCTATCACAGCCTCCTCTATGGGCGGGCCCCTAAGCCAGTCCCCAGCCTCACTGTCCTCCCAGGGCT
ACACAGCCGCCTCACTGGGCTTTGGAGCCGTCGACTGTCTAGACTACAAAGACCAAACTGCCTGGAAGCTCAATTTCAAT
GCCGCTGACTGTCTGGACTACAAAGACCAGAACTCCTGGAAGTTCCAGGTCTTGTAAATAACAGGAGGTGGGGCGTGGGG
AGGGAGGTAGAGGGAAGAGGTAAGAAATAAAAAGATAATAATCAAAGTAGGTTGAAAAAAAAAAACAAGATTACTTTCTA
TGTGTTTTAGAAGGAGGAAGAGGTAAACTTGGGACACAGAAGTCCCACCAATCACACATCGGCTGAGGAAGTGATCGGCT
GAAATAAACTCTACGTGTTTGTTGTTTCAGAAAAATATCAGTGGGAGTAATGTGATCTGTTGAAGCTCGGTTTGGTGACT
GTAACAAAGAGATGACAATAGTGTTTAAGCAACATAGAAAATCAGCCTTGAAATCAAGGAATGACCACATGTAAGGAAAA
AGAGACTGATGTATGCAGAATAAAATCAGACTAGTGAGAACAAGCTTTCCTTTTGATTCGACTGATAAAGCTGAGTTTGA
CTTGGACCAAATTTAAAGCAGGGCTTATTTGTAAAAATGCCACAGCACAACAACATTTGTAACCTACAGGTTGTTTTTAA
CATAGAATTGAAATGGACCTTTTACACTGATGAGAACTGCATTTCTTCCTTTCAGACTTCTAATTTTGTTTTTTCTGTGA
TGTTTTTCTTTGAAAAAGCTGCTTTTTTAATCATTGAGCTTTGAGAAATGAAAACAGTTCAGCTAACCCAATGTGACACC
TAAAGCTTGGTGTCTTTACAGGGTTTTCTCTAAATCACACACAAGCTGATGGTTCCTAGTAGCCTTGCATGACAGTGACC
CCCTGCAGCCTGTGTGGGATACGAGCTGAGGGGGGGGAGGAGTAGGTCACTCCAGTGACTGCAGTACGAACCTGTTGCCT
TTGAGCATGGTTATAATCATTAGCTGAATGGCTAGTACATTGTTAGTGTAATAAGATCACTTCCACACATTTTGAGGGAC
AATGGTCACATTGTTGCTAATTGAGGCAGATGAACCCCTCTTCATCTCACAGTGGCATGATGAAAGCAGACTGCCAATAA
ACTGCTGCAGTGAGGTATCTGATGGGAGAGGAGACTGCACCGGAGAAAGGGAAGGAACTGGGCCTACATGCGGCCAACTC
ACCCCTCCTCCTCCTCCTTTGCTCAGAGTCTGGTGCCTCTCTCAGCTCCAACCTGTAAAGATGTGATAGGTACCACTTTA
TGTGTTTGATGTTTTGTCTGATTTTTTTTCTCTTTTTTTTGTATTAGACTTAAAACAACTTAAGTTTCTTTTCAAATTTG
TGAATTTGTTTGAGTAAAATCTGTGGTAATTTGTTTTTAAGTTCATATTACTATCAGTACTATTATAACTATCATCATTA
ATATTATATCTTCTGCTGACATGGACTTTGCTAATATACTTTTTTGTTGTTGTTTTGTAAATATTAAAACTTGAAAGTGT
AATCATGTCTGGTATCAGCTGTGTGTTGTTACACAGGCACTCCACCCAACAGACTCTGTCACCCTCTTTCTTAATTTCTA
GAAAACTGCCAACTTTTAATTTTTTTTCTGTTTATATACTTCTGGTTTCTGCTTCTTCTTCTTCTTCTTCTTCTTTTTTG
TCAAACTCAGGGGTTTATCCAATAGAAGTAGCAGTATGCTTCTTAATCATTTATTGTACTTACATTTTTTTTTTTTGCTT
TATAATCGTCTCTGCTTATTTTCTGATATGAATTATTTTGTATATTTCATTTGTCTCCTGTGTTTGACCGGTCTCATCAC
TACCATGCCAGATAGCTACAATGTTTCTGAGACATTAAACAACTTCATTAAAA
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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