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otx5 (Orthodenticle homeobox homolog 5)

Organism
Astatotilapia burtoni (Astatotilapia burtoni )
GO term(s)
Molecular Function: GO:0003677, GO:0043565, GO:00037000
Cellular Component: GO:0005634
Biological Process: GO:0032922
Paralogs
Sequencing Methods
otx5a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005179965.1) annotated using gene prediction method: Gnomon.

otx5b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005179480.1) annotated using gene prediction method: Gnomon.
Sequence >XM_005947785.2 Astatotilapia (Haplochromis) burtoni otx5a
AAAGAAACTCAGTAGAGCGACCTCACCAAGGCGCAAAGGCATCCGAAGGCCACTTCACCTGTGTGACTTTGACTGTGTGA
AGTTGGACAGAGAGGCGGTCCGGATGCTCGCTGCTCTGCGGTGTGCTGCCCAGCTTAGCTGACAGTCGGTTACAGCTGAA
AGAGCAGTTTAAGAAAAAAGGAAAGAGAAAGAAGAAAAAAGCACTTGTCTTGTGAACTCCTGCGCGCCCCGCTTATCCGT
TCAGCGCCTGGCCTCGGACGCACCGACTTGTTGCCCCGGCTGAGCTCTGAGGGGGCCACGGCTGCTGCGTTGCGTGTCCG
ACCTACAAGTCAGCGAGAGGACTTAAAAGGCTGCTGTAAGGATGATGTCCTACATAAAGCAACCCCATTACACCATGAAC
GGGTTAAACGTGCCTGCTCCTGGAATGGATGTGCTTCATACAACCGTCGCTTATCCACCCACTCCCAGGAAGCAGCGCAG
GGAGCGCACCACCTTCACCCGCACACAGCTGGACATCCTGGAGGCGCTCTTCTCAAAGACCCGCTACCCAGACATCTTCA
TGAGGGAGGAGGTGGCCCTCAAGATCAACCTGCCTGAGTCACGTGTCCAGGTTTGGTTTAAAAACCGCCGTGCCAAGTGC
CGCCAGCAGCAGCAGCAGAGCAGCGGCCAGTCCAAGCCCCGGCCTCCCAAAAAGAAGGCCTCGCCAGCGCAGGAGCCTAG
TGCTCCTGATCCCGTTCCTAACCCATCTGGCTCATTCAGCCCCTCCTCAGCCCATTCTGGCCCCAGCCTGGCCCCGAGCT
CCAGCACCGGAAACACTGCCGTGTCCATTTGGAGCCCAGCCATCTCACCCCTGCCTGACCCCTTGGCCTCCTCCTCGGCG
CCCTGCATGCAGCGGCCCTCACCTTACCCTATGAGCTATGGCCAGCCATCAGCCTACACCCAGGGCTATGCTAGCACAAC
CTCCTACTTCACTGGCCTGGACTGCAGCGCCTATCTGTCCCCCATGCATTCACAGTTGTCAGGCACCGGAGGTGCTCTCA
GCCCCATTGCTGTGCCCTCTATGGGGGGCTCCTTAAGCCAGTCCCCAGCATCTCTGTCTTCACAGGGCTACAGCACTGCC
TCTTCCCTGGGCTTCACCTCTGTCGACTGCCTGGACTACAAGGACCAGCAGGCCTGGAAGCTGGGCTTCACCACAATGGA
TTGCCTGGATCACAAGGACCAAAACTCCTGGAAGTTCCAGGTTCTCTAGAAAGCGTGTCAACATGCCACGTGCATCAGTG
AATCCCATGTAAGATAGGGCAAAGCAGTTCTCCCAGAGGACTTAACATTGATTTCTCAGTTTGTCATTTGTAAGATTTTC
TGTAGGAAATGCATTTGATTTAAAAGGTTTGGAGATGAACAAATGAATGAGTGTCATCGATGCTGCCTGACTGCAAATCA
TGTCTGTTTTCTTCTTTGTGTTATCTTAAATAAGAGAACAAACGCCTTTAAACAGTTTGAAGGAAAAGACTGGAGAAACA
ACACAAGCTATCTCTT
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>XM_014334947.1 Astatotilapia (Haplochromis) burtoni otx5b
CAGCTGGAGGTCTCGAGACAGTCTTGTCCTCGGACTCCCCACATTTAGCTCATTTAGCTATCCTGCTAGCAGTTAGCTGT
GTATAAACTACCCAACAACAACTGACAATAACAGCTAGACATACAAACAAACACACAGGCGTACCTGGATGCGGTGAGCA
ACTGAAGAGTCCACCGTATCCAAACCGTGAACAGCGCGCACACTGGAAGGCCTCCCACACACTGAGACAGCCACACACAC
CTCAGCAGATCAGCGTCCTCTTCTTCTCAGGGACGACCAGGGACAGAGAGGCCCCCCACCCGCCTTACAATTTTTCAACA
CCCGTCAGACCGCAGGCACCAAACTGCTGTGGAGCTGCCGCTGCTGCCGCTGCTGCCGCTGCTTTTTGGCATCTTTCACC
CGGCCACGTTACATGTGCGCACTGCAATTACGCACGGCTCTGATGGAGATTCTAACCGGCCTCGATTAGCGAACTGTGCT
GTTTTCAGTGTGGTGTATTGACTTGTCGCACCGGGCCGACTTCAGTTGAGGTAGTCTTTCTTTTTTTGACTAGAAGCATT
GAACAAACACCAAATCCTTAAAAGCGCCGTGGTTTTACGCGTCAGGTGGAAACAAACGTAAAGGGGCTTGGCCAAAGGTG
CCTGGCTGGAAGGCAGTAAGTCAGAGTAAGGTATAAAGATAGTTGAGGAGAAGGCAGTCAATGGACAATTAAAAAAACAA
AAACAACCTAAGGCCAAACATCCCAGGAAAAGGAACAAACACCGTTAAAGGCAGTTAGAAGGAAAATAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGGAGGGAGAGGGAAAGAGAGAGAGAGAGATACACCCCCTGGAGACTAGTTAGGAGACCCGGC
CCCCGGTCTGAGAGAAGGAGAGAGCGAGTGAGGGAGTGTTTTAAAGCCGGCAGGAGGCATGATGTCCTACATTAAGCAAC
CCCATTACGCCGTGAACGGGTTAACGCTGTCCGGCCCGGGCATGGATCTGCTCCACACCGCCGCCGTTGGATATCCCAGC
ACCCCACGCAAACAGCGTCGGGAGCGCACGACTTTCACGCGTGCGCAGCTGGACATCCTGGAGGCTCTTTTTGCCAAAAC
ACGCTACCCAGACATCTTCATGAGGGAGGAAGTGGCACTCAAGATCAACCTGCCTGAGTCCAGAGTCCAGGTCTGGTTCA
AAAACCGTCGTGCCAAGTGCCGCCAGCAGCAGCAACAGAGCACAGGCCAGTCCAAACCACGGCCCCCTAAAAAGAAGGCA
TCCCCTGCTCGTGAGGCCAACACCGAGGCCAGTGCCAACCCCACCAACGGTCCCTACAGCCCTCCTCCCCCTCCTCCAGG
CACCGCCATCACCCCCAGTTCCAGCTCTGCTAGTGCCACAGTGTCCATCTGGAGCCCAGCCTCGATCTCTCCGCTGCCAG
ACCCCCTGTCTGCTTCCACCACCCCGTGCATGCAGCGTACCACCACCTACCCCATGACCTACACCCAGGCCCCAGCCTAC
AGCCAGAGCTACGCAGGCTCCTCCTCCTACTTCACTGGCCTGGACTGTAGCTCCTACCTGTCTCCAATGCACCCACAGCT
GTCGGGGACCGGAGGGGCCCTGAGCCCTATCACAGCCTCCTCTATGGGCGGGCCCCTAAGCCAGTCCCCAGCCTCACTGT
CCTCCCAGGGCTACACAGCCGCCTCACTGGGCTTTGGAGCCGTCGACTGTCTAGACTACAAAGACCAAACTGCCTGGAAG
CTCAATTTCAATGCCGCTGACTGTCTGGACTACAAAGACCAGAACTCCTGGAAGTTCCAGGTCTTGTAAATAACAGGAGG
TGGGGCGTGGGGAGGGAGGTAGAGGGAAGAGGTAAGAAATAAAAAGATAATAATCAAAGTAGGTTGGAAAAAAAAACAAG
ATTACTTTCTATGTGTTTTAGAAGGAGGAAGAGGTAAAATTGGGACACAGAAGTCCCACCAATCACACATCAGCTGAGGA
AGTGATCGGCTGAAATAAACTCTACGTGTTTGTCGTTTCAGAAAAATATCAGTGGGAGTAATGTGATCTGTTGAAGCTTG
GTTTGGTGATTGTAACAAAGAGATGGCAATCGTGTTTAAGCAACATAGAAAATCAGCCTTGAAATCAAGGAATGACTACA
TGTAAGGAAAAAGAGACTGATGTATGCAGAATAAAATCAGACTAGTGAGAACAAGCTTTCCTGTTGATTCGACTGATAAA
GCTGAGTTTGACTCGGACCAAATTTAAAGCAGGGCTTATTTGTAAAATTGCCACAGCACAACAACATTTGTAACCTACAG
GTTGTTTTTAACATAGAATTGAAATGGACCTTTTACACTGATGAGAACTGCATTTCTTCCTTTCAGACTTCTAATTTTGT
TTTTTCTGTCATGTTTTTCTTTGAAAAAGCTGCTTTTTTTAATCATTGAGCTTTGAGAAATGAAAACAGTTCAGCTAACC
CAATGTGACACCTAAAGCTTGGTGTCTTTACAGGGTCTTCTCTAAATCACACACAAGCTGATGGTTCCTAGTAGCCTTGC
ATGACAGTGACCCCCTGCAGCCTGTGTGGGATACGAGCTGAGGGGGGGGAGGAGTAGGTCACTCCAGTGACTGCAGTACG
AACCTGTTGCCTTTGAGCATGGTTATAATCATTAGCTGAATGGCTAGTACATTGTTAGTGTAATAAGATCACTTCCACAC
ATTTTGAGGGACAATGGTCACATTGTTGCTAGTTGAGGCAGAGGAACCCCTCTTCATCTCACAGTGGCATGATGAGAGCA
GACTGCCAATAAACTGCTGCAGTGAGGTATCTGATGGGAGAGGAGACTGCACCGGAGAAAGGGAAGGGACTGGGCCTACA
TGCGGCCGACTCATCCCTCCTCCTCCTTTGCTCAGAGTCTGGTGCCTCTCTCAGCTCCAACCTGTAAAGATGTGATGGGT
ACCACTTTATGTGTTTGATGTTTTGTCTGATTTCTTTTCTTTTTTGTATTAGACTTAAAACAACTTAAGTTTCTTTTCAA
ATTTGTGAATTTGTTTGAGTAAAATTTGTGGTAATTTGTTTTTAAGTTCATATTACTATCAGTACTATTATAACTATCAT
CATTAATATTATATCTTCTGCTGACATGGACTTTGCTAATATACTTTTTTGTTGTTGTTTTGTAAATATTAAAACTTGAA
AGTGTAATCATGTCTGGTATCAGCTGTGTGTTGTTACACAGGCACTCCACCCAACAGACTCTATCACCCTCTTTCTTAAT
TTCTAGAAAACTGCCAACTTTTAATTTTTTTTCTGTTTATATACTTCTGGTTTCTGCTTCTTCTTCTTCTTTTTTGTCAA
ACTCAGGGGTTTATCCAATAGAAGTAGCAGTATGCTTCTTAATCATTTATTGTACTTACATTTTTTTTTTTTGCTTTATA
ATCGTCTCTGCTTATTTTCTGATATGAATTATTTTGTATATTTCATTTGTCTCCTGTGTTTGACCGGTCTCATCACTACC
ATGCCAGATAGCTACAATGTTTCTGAGACATTAAACAACTTCATTAAAA
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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