Home BLAST Help About  

otx5 (Orthodenticle homeobox homolog 5)

Organism
Maylandia zebra (Zebra mbuna)
GO term(s)
Molecular Function: GO:0003677, GO:0043565, GO:00037000
Cellular Component: GO:0005634
Biological Process: GO:0032922
Paralogs
Sequencing Methods
otx5a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014447861.1) annotated using gene prediction method: Gnomon.

otx5b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014447310.1) annotated using gene prediction method: Gnomon.
Sequence >XM_004561580.3 Maylandia zebra otx5a
TCTGTGCGTGCGTGTGTGTGTGTGTGGGAGGGGTTTGTTGGAGACACTTGCTCCCTCTAATTAGCAGTCTGCGCCGGTAA
AGAAACTCAGTAGAGCAACCTCACCAAGGCGCAAAGGCATCCGAAGGCCACTTCACCTGTGTGACTTTGACTGTGTGAAG
TTGGACAGAGAGGCGGTCCGGATGCTCGCTGCTCTGCGGTGTGCTGCCCAGCTTAGCTGACAGTCGGTTACAGCTGAAAG
AGCAGTTTAAGAAAAAAGGAAAGAGAAAGAAGAAAAAAGCACTTTGACGCTTGTCTTGTGAACTCCTGCGCGCCCCGCTT
ATCCGTTCAGCGCCTGGCCTCGGACGCACCGACTTGTTGCCCCGGCTGAGCTCTGAGGGGGCCACGGCTGCTGCGTTGCG
TGTCCGACCTACAAGTCAGCGAGAGGACTTAAAAGGCTGCTGTAAGGATGATGTCCTACATAAAGCAACCCCATTACACC
ATGAACGGGTTAAACGTGCCTGCCCCTGGGATGGATGTGCTTCATACAACCGTCGCTTATCCACCCACTCCCAGGAAGCA
GCGCAGGGAGCGCACCACCTTCACCCGCACACAGCTGGACATCCTGGAGGCGCTCTTCTCAAAGACCCGCTACCCAGACA
TCTTCATGAGGGAGGAGGTGGCCCTCAAGATCAACCTGCCTGAGTCACGTGTCCAGGTTTGGTTTAAAAACCGCCGTGCC
AAGTGCCGCCAGCAGCAGCAGCAGAGCAGTGGCCAGTCCAAGCCCCGGCCTCCCAAAAAGAAGGCCTCGCCAGCGCAGGA
GCCTAGCGCTCCTGATCCCGTTCCTAACCCATCTGGCTCATTCAGCCCCTCCTCAGCCCATTCTGGCCCCAGCCTGGCCC
CGAGCTCCAGCACCGGAAACACTGCCGTGTCCATTTGGAGCCCAGCCATCTCACCCCTGCCAGACCCCTTGGCCTCCTCC
TCGGCGCCCTGCATGCAGCGGCCCTCACCTTACCCTATGAGCTATGGCCAGCCGTCAGCCTACACCCAGGGCTATGCTAG
CACAACCTCCTACTTCACTGGCCTGGACTGCAGCGCCTATCTGTCCCCCATGCATTCACAGTTGTCAGGCACCGGAGGTG
CTCTCAGCCCCATTGCTGTGCCCTCTATGGGGGGCTCCTTAAGCCAGTCCCCAGCATCTCTGTCTTCACAGGGCTACAGC
ACTGCCTCTTCCCTGGGCTTCACCTCTGTCGACTGCCTGGACTACAAGGACCAGCAGGCCTGGAAGCTGGGCTTCACCAC
AATGGATTGCCTGGATCACAAGGACCAAAACTCCTGGAAGTTCCAGGTTCTCTAGAAAGGGTGTCAACATGCCACGTGCA
TCAGTGAATCCCATGTAAGATAGGGCAAAGCAGTTCTCCCAGAGGACTTAACATTGATTTCTCAGTTTGTCATTTGTAAG
ATTTTCTGTAGGAAATGCATTTGATTTAAAAGGTTTGGAGATGAACAAATGAATGAGTGTCATCGATGCTGCCTGACTGC
AAATCATGTCTGTTTTCTTCTTCGTGTTATCTTAAATAAGAGAACAAACGCCTTTAAACAGTTTGAAGGAAAAGACTGGA
GAAACAACACAAGCTATCTCTTTCTCTCTCACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACTTTGTGTTCCATTTGCATAGAGTGAAAGGAGAGCTTTTTGTCCTGGAGGAGCTCCTGTAGGTCCTCCTTCAGGG
TTACGTTATTTTGAGCTATTTATTGTTATTAATATTATTATTTGAAGTTCCATTTGAATATCTAATTTGACTGCATTTAG
ATCTTTTTTAGCTTTCGTGTTAAGTATTACAGTGTTCACCTTTAGTGTCATCATCCTGATCTGTTTGATGGAGAAAAAAA
TTGATTTTCTGTTTTAAATGTGACACATTAAAGTGATCTATTCTTTACATGTTTGCACACTGATGATCTTTGGGATGAGT
TCCAGTTTGAAAGTGTAGCTTTAGCGGATTTGGAAGTCACAGTTAGGGGTCAGTGTGAAGTGGACGTTGGATGTAAAGTG
GCCATGTTGTAGCAGTGGGCTCTGGAGCCGCCATGTTTGTCATAAGGCCTGCATGGCTCTCACTGTTCCATCTTGGTTAT
TTTAGCTTATCTGATTCTGGGAGTGTTCCAATCCTCTTAGAATCCCTTCAGCAATGCCCTAAGTGAATTAGTTAGGATTA
TTGCCCTACCTCCCTCTGTCTGTCACCTACCTCAGCCTCTTCTTCCACTTCCATTCCCCTCTTTCTCCTGTTTCTCTCCA
TCTTTTCTGTCTATTCTCTCCCATTAGCTTTGCAGTATTACTTTTTCCTCCACCTCTGGCTCTTAAAGCCTTTTCAGTTT
AGCTGCATCTCTGTTGTCATGCACATCTCCCAAAAACAGCTGTCTCACTGACCACAGTGCAGTTTAATAAAGTGCTTTTT
GCTTACA
Send to
or

>XM_004562781.3 Maylandia zebra otx5b
GCGGTGTGTGTTTTATAATACTTTTTCGATGTTTGTGTTTACTGCCTGCATATCAACAAGTCTTCTTTGTTGCTGCGGCG
ACATTTAGATCAAATAGGGACATTAAAAAGACCATATATTATCCTCTATTGAAAGACAACTTGAATGAATAATGAACAAT
ATGTAGATGCGCGTGGGCGTGTGCGCAGAGAGAGAGAGGGAGAGAGAGAAGGAGGGAGGGCTCTGGGTGTCTACTTGGAT
AAGAAGTTACTTCTAATTAGCCAGTCTCTTCTCGCTCTCCTCACTTGTCCGCCCTGCAGATCAGCATCCTCTTCTTCTCA
GGGACGACCAGGGACAGAGAGGCCCCCCACCCGCCTTACAATTTTTCAACACCCGTCAGACCGCAGGCACCAAACTGCTG
TGGAGCTGCCGCTGCTGCCGCTGCTGCCGCTGCTTTTTGCCATCTTTCACCCGGCCACGTTATATGTGCGCACTGCAATT
ACGCACGGCTCTGATGGAGATTCTAACCGGCCTCGATTAGCGAACTGTGCTGTTTTCAGTGTGGTGTATTGACTTGTCGC
ACCGGGCCGACTTCAGTTGAGGTAGTCTTTCTTTTTTTGACTAGAAGCATTGAACAAACACCAAATCCTTAAAAGCGCCG
TGGTTTTACGCGTCAGATGGAAACAAACGTAAAGGGGCTTGGCCAAAGGTGCCTGGCTGGAAGGCAGTAAGTCAGAGTAA
CGTATAAAAATAGTTGAGGAGAAGGCAGTCAATGGACAATTAAAAAAACAAAACAACCTAAGGCCAAACATCCCAGGAAA
AGGAACAAACACCGTTAAAGGCAGTTAGAAGGAAAATAGAGAGAGAGAGAGAGGAGGGAGAGGGAAAGAGAGAGAGAGAG
AGAGAGAGAGAGAGACAGAGAGAGATACACCCCCTGGAGACTAGTTAGGAGACCCGGCCCCCGGTCTGAGAGAAGGAGAG
AGCGAGTGAGAGAGTGTTTTAAAGCCGGCAGGAGGCATGATGTCCTACATTAAGCAACCCCATTACGCCGTGAACGGGTT
AACGCTGTCCGGCCCGGGCATGGATCTGCTCCACACCGCCGCCGTTGGATATCCCAGCACCCCACGCAAACAGCGTCGGG
AGCGCACGACTTTCACGCGTGCGCAGCTGGACATCCTGGAGGCTCTTTTTGCCAAAACACGCTACCCAGACATCTTCATG
AGGGAGGAAGTGGCACTCAAGATCAACCTGCCTGAGTCCAGAGTCCAGGTCTGGTTCAAAAACCGTCGTGCCAAGTGCCG
CCAGCAGCAGCAACAGAGCACAGGCCAGTCCAAACCACGGCCCCCTAAAAAGAAGGCATCCCCTGCTCGTGAGGCCAACA
CCGAGGCCAGTGCCAACCCCACCAACGGTCCCTACAGCCCTCCTCCCCCTCCTCCAGGCACCGCCATCACCCCCAGTTCC
AGCTCTGCTAGTGCCACAGTGTCCATCTGGAGCCCAGCCTCGATCTCTCCGCTGCCAGACCCCCTGTCTGCTTCCACCAC
CCCGTGCATGCAGCGTACCACCACCTACCCCATGACCTACACCCAGGCCCCAGCCTACAGCCAGAGCTACGCAGGCTCCT
CCTCCTACTTCACTGGCCTGGACTGTAGCTCCTACCTGTCTCCAATGCACCCACAGCTGTCGGGGACCGGAGGGGCCCTG
AGCCCTATCACAGCCTCCTCTATGGGCGGGCCCCTAAGCCAGTCCCCAGCCTCACTGTCCTCCCAGGGCTACACAGCCGC
CTCACTGGGCTTTGGAGCCGTCGACTGTCTAGACTACAAAGACCAAACTGCCTGGAAGCTCAATTTCAATGCCGCTGACT
GTCTGGACTACAAAGACCAGAACTCCTGGAAGTTCCAGGTCTTGTAAATAACAGGAGGTGGGGCGTGGGGAGGGAGGTAG
AGGGAAGAGGTAAGAAATAAAAAGATAATAATCAAAGTAGGTTGAAAAAAAAAAACAAGATTACTTTCTATGTGTTTTAG
AAGGAGGAAGAGGTAAACTTGGGACACAGAAGTCCCACCAATCACACATCAGCTGAGGAAGTGATCGGCTGAAATAAACT
CTACGTGTTTGTCGTTTCAGAAAAATATCAGTGGGAGTAATGTGATCTGTTGAAGCTCGGTTTGGTGATTGTAACAAAGA
GATGGCAATCGTGTTTAAGCAACATAGAAAATCAGCCTTGAAATCAAGGAATGACTACATGTAAGGAAAAAGAGACTTAT
GTATGCAGAATAAAATCAGACTAGTGAGAACAAGCTTTCCTTTTGATTCGACTGATAAAGCTGAGTTTGACTTGGACCAA
ATTTAAAGCAGGGCTTATTTGTAAAATTGCCACAGCACAACAACATTTGTAACCTACAGGTTGTTTTTAACATAGAATTG
AAATGGACCTTTTACACTGATGAGAACTGCATTTCTTCCTTTCAGACTTCTAATTTTGTTTTTTCTGTCATGTTTTTCTT
TGAAAAAGCTGCTTTTTTTAAATCATTGAGCTTTGAGAAATGAAAACAGTTCAGCTAACCCAATGTGACACCTAAAGCTC
GGTGTCTTTACAGGGTCTTCTCTAAATCACACACAAGCTGATGGTTCCCAGTAGCCTTGCATGACAGTGACCCCCTGCAG
CCTGTGTGGGATACGAGCTGAGGGGGGGGAGGAGTAGGTCACTCCAGTGACTGCAGTACGAACCTGTTGCCTTTGAGCAT
GGTTATAATCATTAGCTGAATGGCTAGTACATTGTTAGTGTAATAAGATCACTTCCACACATTTTGAGGGACAATGGTCA
CATTGTTGCTAGTTGAGGCAGAGGAACCTCTTCATCTCACAGTGGCATGATGAGAGCAGACTGCCAATAAACTGCTGCAG
TGAGGTATCTGATGGGAGAGGAGACTGCACCGGAGAAAGGGAAGGGACTGGGCCTACATGCGGCCGACTCACCCCTCCTC
CTCCTCCTCCTCCTTTGCTCAGAGTCTGGTGCCTCTCTCAGCTCCAACCTGTAAAGATGTGATGGGTACCACTTTATGTG
TTTGATGTTTTGTCTGATTTCTTTTCTTTTTTGTATTAGACTTAAAACAACTTAAGTTTCTTTTCAAATTTGTGAATTTG
TTTGAGTAAAATTTGTGGTAATTTGTTTTTAAGTTCATATTACTATCAGTACTATTATAACTATCATCATTAATATTATA
TCTTCTGCTGACATGGACTTTGCTAATATACTTTTTTGTTGTTGTTTTGTAAATATTAAAACTTGAAAGTGTAATCATGT
CTGGTATCAGCTGTGTGTTGTTACACAGGCACTCCACCCAACAGACTCTATCACCCTCTTTCTTAATTTCTAGAAAACTG
CCAACTTTTAATTTTTTTTTCTGTTTATATACTTCTGGTTTCTGCTTCTTCTTCTTCTTTTTTGTCAAACTCAGGGGTTT
ATCCAATAGAAGTAGCAGTATGCTTCTTAATCATTTATTGTACTTACATTTTTTTTTTTGCTTTATAATCGTCTCTGCTT
ATTTTCTGATATGAATTATTTTGTATATTTCATTTGTCTCCTGTGTTTGACCGGTCTCATCACTACCATGCCAGATAGCT
ACAATGTTTCTGAGACATTAAACAACTTCATTAAAA
Send to
or



Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
CLICK IMAGES
FOR LARGER SIZE