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otx5 (Orthodenticle homeobox homolog 5)

Organism
Stegastes partitus (Bicolor damselfish )
GO term(s)
Molecular Function: GO:0003677, GO:0043565, GO:00037000
Cellular Component: GO:0005634
Biological Process: GO:0032922
Paralogs
Sequencing Methods
otx5a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007578011.1) annotated using gene prediction method: Gnomon.

otx5b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007578519.1) annotated using gene prediction method: Gnomon.
Sequence >XM_008282636.1 Stegastes partitus otx5a
ATGATGTCCTACATAAAGCAGCCCCATTACACCATGAATGGGTTAAATTTGCCCGGCCCCGGGATGGACGTGCTGCACAC
CACCGTCGCTTATCCACCCACTCCCCGGAAGCAGCGCAGAGAGCGCACCACCTTCACCCGGACACAGCTGGACATCCTGG
AGGCGCTGTTCTCCAAGACCCGCTACCCAGACATCTTCATGAGGGAGGAGGTGGCCCTCAAGATCAACCTGCCCGAGTCA
CGTGTGCAGGTTTGGTTTAAAAACCGCCGTGCCAAGTGCCGCCAGCAGCAGCAGCAGAGCACCGGCCAGTCTAAGCCCCG
CCCCCCTAAGAAGAAGGCCTCACCAGTGCAGGAACCCAGTGCCCCTGATCCTGTTCCTAACCCATCTGGCTCTTATAGCC
CCACTTCAGCCCAATCAGGGCCCAGCCTGGCTCCAAGCTCCAGCACTGGGAACACCGCCGTGTCCATCTGGAGCCCAGCC
ATCTCACCCTTGCCTGATCCTCTGGCCTCCTCCTCGGCGCCCTGCATGCAGCGGCCCTCACCGTATCCTATGAGCTATGG
CCAGCCGTCAGCCTACACCCAGGGCTACGCCAGCACCACCTCCTACTTCACCGGCCTGGACTGCAGTGCCTACCTGTCCC
CCATGCACTCGCAGCTGTCAGGCACCGGGGGCGCTCTCAGTCCCATCACTGTGCCCTCTATGGGGGGCTCCCTGAGCCAA
TCCCCAGCATCGCTGTCCTCACAGGGCTACAGCACTGCCTCCTCCCTGGGCTTCACCTCTGTTGACTGCCTTGACTACAA
GGACCAGCAGGCCTGGAAACTGGGCTTCACCACAATGGACTGCCTGGATCACAAGGACCAAAACTCCTGGAAGTTCCAGG
TCCTCTAG
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>XM_008292153.1 Stegastes partitus otx5b
GTGAGGGAGTGAGGGAGTGTTTTAAAGCCGGCAGGAGGCATGATGTCCTACATTAAGCAACCCCATTACGCCGTGAACGG
GTTAACGCTGTCCGGCCCGGGCATGGATCTGCTCCACACCGCCGCCGTTGGATATCCCAGCACCCCACGTAAACAGCGTC
GGGAACGCACCACCTTTACGCGCGCGCAGCTGGACATCCTGGAGGCTCTGTTTGCCAAAACTCGGTACCCAGACATCTTC
ATGAGGGAGGAGGTGGCCCTGAAGATCAACCTGCCCGAGTCTAGAGTCCAGGTTTGGTTCAAGAACCGTCGTGCCAAGTG
CCGCCAGCAGCAGCAGCAGAGCACAGGCCAGTCCAAACCCCGGCCCCCTAAGAAGAAGGCCTCCCCTGCTCGCGAGGCCA
ACACCGAGGCCAGTGCCAACCCCACCAATGGACCCTACAGCCCTCCACCCCCTCCTCCAGGCACCGCCATCACCCCCAGC
TCCAGCTCTGCCAGTGCCACGGTGTCCATCTGGAGCCCAGCCTCCATCTCTCCGCTGCCAGACCCCCTGTCTGCCTCCAC
CACCCCCTGCATGCAGCGCACCACCACCTACCCCATGACCTACACCCAGGCCCCAGCCTACAGCCAGAGCTATGCAGGCT
CCTCCTCCTACTTCACTGGCCTGGACTGTAGCTCCTACCTGTCTCCAATGCACCCGCAGCTGTCGGGCACCGGCGGAGCC
CTGAGCCCCATCACGGCCTCCTCTATGGGTGGGCCCCTCAGCCAGTCCCCCGCCTCGCTCTCCTCCCAGGGCTACACAGC
CGCCTCACTGGGCTTCGGGGCCGTCGACTGTCTAGACTACAAAGACCAAGCTGCCTGGAAGCTCAATTTCAATGCCGCTG
ACTGTCTGGACTACAAAGACCAGAACTCCTGGAAGTTCCAGGTCTTGTAA
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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