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HSP8 (Heat Shock 70kDa Protein/HSP71)

Organism
Solea senegalensis (Senegalese sole)
Phylogeny
Paralogs
hsp8-aI,
AB513855.1
hsp8-aII,
hsp8-b
hsp8-b
Sequencing Methods
hsp8-aI: Sanger sequencing

hsp8-aII: http://www.juntadeandalucia.es/agriculturaypesca/ifapa/soleadb_ifapa/assemblies/46?tab=inf

hsp8-b: Illumina paired end sequencing
Citations
  • fish-it.org.
  • http://www.juntadeandalucia.es/agriculturaypesca/ifapa/soleadb_ifapa/assemblies/46?tab=inf.
    		•
    Sequence >AB513855.1 Solea senegalensis hsp8-aI
    ATGTCAAAAGGACCTGCGATAGGCATTGACCTGGGCACCACATATTCCTGTGTGGGTATCTTCCAGCATGGTAAAGTGGA
    AATCATTGCCAACGACCAAGGAAATAGGACCACGCCCAGCTATGTGGCCTTTACAGATACTGAGAGACTGATTGGTGATG
    CTGCCAAGAACCAGGTGGCTATGAACCCATCCAACACTGTATTTGATGCTAAGCGTTTGATTGGCCGTAAGTTTGATGAC
    CCTGTTGTGCAGTCAGACATGAAGTACTGGCCCTTCAAGGTTGTGAATGATGGATCCAAACCCAAAGTAGAGGTCGAATA
    CAAGGGTGAGATTAAGACCTTCTTCGCTGAGGAAGTTTCCTCAATGGTCCTCACGAAGATGAAGGAGATCTCTGAAGCTT
    ATCTTGGCAAGCCTGTTACCAATGCAGTTGTCACAGTTCCTGCATACTTCAATGACTCCCAGCGTCAAGCCACTAAAGAC
    GCTGGAACCATATCTGGGCTTAATGTACTGCGCATCATCAACGAGCCCACTGCTGCAGCCATTGCTTATGGCCTGGACAA
    AAAGGTTGGTGGTGAACGTAATGTCCTTATCTTTGACCTTGGAGGTGGTACTTTTGATGTGTCGATCCTGACAATTGAGG
    ATGGCATCTTTGAGGTCAAGTCTACAGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGATAACCGCATGGTTAACCAC
    TTCATTGCTGAGTTCAAGCGCAAGTTCAAAAAGGAAATCAACAACAATAAGCGAGCTGTCCGTCGTCTGCGCACAGCATG
    TGAGCGTGCCAAGCGAACCCTCTCCAGCAGCACCCAGGCCAGCATTGAGATTGATTCACTCTATGAAGGAGCAGATTTTT
    ACACTTCTATTACCAGGGCCCGTTTTGAAGAGCTAAATGCAGACCTTTTCCGTGGAACCCTTGAGCCTGTGGAGAAGGCC
    CTGAGGGATGCCAAGATGGACAAGAGCCAGGTCCATGACATTGTCCTGGTCGGTGGCTCTACACGTATCCCCAAGATTCA
    AAAGCTATTGCAGGACTTCTTCAATGGCCGTGATCTCAACAAGAGCATCAACCCTGATGAGGCCGTGGCCTATGGCGCAG
    CTGTGCAGGCAGCCATCTTGGCTGGTGATAAGTCTGAGAATGTACAGGACCTGCTCCTGCTGGATGTGACACCCCTGTCC
    CTGGGAATTGAAACCGCTGGAGGCGTGATGACTGTTCTTATCAAAAGAAACACCACCATCCCCACAAAGCAAACCCAGAC
    CTTTACCACCTATTCTGACAACCAACCTGGTGTACTCATTCAGGTTTATGAGGGTGAGAGAGCCATGACCAAGGACAATA
    ATATTCTGGGCAAGTTTGAGCTGACTGGTATTCCACCTGCTCCAAGAGGGGTCCCACAGATCGAGGTTACCTTTGACATT
    GATGCCAATGGCATTCTCAATGTGTCTGCAGTGGACAAAAGCACGGGGAAGGAGAACAAGATCGCCATCACCAATGACAA
    AGGGCGGCTGAGCAAGGAAGACATTGAGCGCATGGTGCAGGAAGCTGAGCAGTTCAAGTCTGAGGATGAGGCCCAGAGAG
    AGAAGGTTACCGCCAAGAACTCCCTGGAGTCTCTGGCCTTCAACATGAAGAGCACTATGGACGATGAGAAGCTCAAAGAC
    AAGATCAGTCCTGAGGACAAAAAGGCAATTGTGGACAAATGCACTGAGGTTATTGCCCGGCTGGACAAGAACCAGATGGC
    AGAGAAGGATGAGTACGAACACCAGCAGAAGGAACTAGAAAAAGTGTGCAACCCCATCATCTCAAAGCTATACCAGGGAG
    GGATGGAAGGAGGGATGCCAGGTGGGATGCCTGGAGGAATGCCAGGTGGTTTCCCTGGTGGAGCTGGAGGTGGCTCCTCT
    GCTGGCCCAAATATTGAGGAGGTCGACTAA
    Send to
    		or

    >solea_v4.1_unigene602068 Solea senegalensis hsp8-aII
    ATGTCTAAGACACCAGCAGTGGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGAGTGTTTCAGCACGGCAAAGTGGA
    AATCATCGCCAACGACCAGGGGAACAGGACCACGCCCAGTTATGTGGCCTTCACTGACACTGAGAGGCTGATCGGTGATG
    CAGCCAAGAACCAGGTGGCTTTGAACCCCAACAACACAGTGTTTGATGCCAAGCGTCTTATTGGGCGTCGGTTTGATGAC
    GCCGTTGTCCAGGCAGACATGAAACACTGGCCTTTCACTGTCATCAATGATGCTTCACGCCCCAAAGTCAAAGTGGAATA
    CAAGGGTGAGACAAAGACCTTCTACCCAGAGGAAATCTCCTCCATGGTGCTGCTCAAAATGAAGGAGATTGCAGAGGCTT
    ATCTGGGCAAGACTGTAACAAGTGCTGTGGTGACTGTTCCCGCCTACTTCAATGACTCTCAGCGTCAGGCGACCAAAGAT
    GCCGGAACCATCTCTGGACTCAACGTGCTCCGTATCATCAACGAGCCGACCGCCGCTGCCATCGCTTATGGTCTAGACAA
    AAAGGTTGGCTCTGAGAGACACGTCCTCATCTTTGACCTGGGCGGTGGAACATTCGACGTGTCCATCCTGACCATCGAGG
    ACGGCATCTTCGAGGTGAAGTCCACAGCGGGCGACACCCACTTGGGAGGCGAAGATTTTGACAACCGCATGGTCAACCAC
    TTCATCTCCGAGTTCAAACGCAAGTACAAGAAGGACATCAGCGACAACAAGAGGGCGGTGCGGCGTCTTCGCACGGCCTG
    CGAGCGAGCCAAGCGCACGCTGTCCTCCAGCACACAGGCCAGCATCGAAATCGACTCGCTCTACGAAGGCGTGGACTTCT
    ACACGTCCATCACCAGAGCGCGCTTTGAGGAGCTGAACGCAGACCTGTTCAGAGGAACGCTGGAGCCTGTGGAGAAAGCT
    CTGCGCGACGCCAAGATGGACAAAGGTCAGGTCAACGAAATCGTACTGGTGGGAGGGTCCACTCGTATTCCCAAGATCCA
    AAAGCTTCTGCAAGACTTCTTCAACGGGAAAGAACTGAATAAGAGCATCAATCCTGATGAAGCAGTGGCTTATGGAGCAG
    CCGTGCAGGCGGCCATCCTCTGTGGAGACAAATCTGAGAACGTGCAGGACCTGCTGCTGCTCGACGTCGCCCCCTTGTCT
    CTGGGCATTGAAACTGCAGGAGGAGTCATGACGGCTCTGATCAAGAGGAACACGACCATCCCCACCAAACAGACGCAGAC
    CTTCACCACCTACTCAGACAACCAGCCTGGAGTCCTCATCCAGGTGTACGAGGGTGAGAGAGCCATGACCAAAGACAACA
    ACCTCCTGGGGAAGTTTGAGCTGACTGGAATCCCTCCTGCTCCCAGAGGAGTTCCTCAGATCGAGGTGACCTTTGACATC
    GACGCCAACGGCATTATGAACGTGTCTGCGGTGGATAAGAGCACGGGGAAGGAGAACAAGATCACCATCACCAATGACAA
    AGGTCGTCTGAGTAAAGAAGACATCGAGCGAATGGTTGACGAAGCGGAGAAGTACAAAGCCGAAGATGAGGTCCAGAGAG
    AGAAGGTGGCTGCCAAGAACGCTCTGGAGGCCTACGCCTTCAACATGAAGTCCACGGTGGACGACGACAAGCTGAAGGGA
    AAGATCAGCGACGAGGACAAGAAGATGATTCTGGACAAGTGCACCGAGGTCATCAGCTGGCTGGACAGAAACCAGTCTGC
    AGAGAAAGACGAGTTTGAGCATCAGCAGAAGGAGCTGGAGAAGCTGTGCAATCCCATCATGACCAAACTGTACCAGAGCT
    CTGGAGGAGCAGCAGGAGGAATGCCAGGAGGTTTCCCTGGATCAGCCAGTGAAGGAGGAGCAGGCTCTGGTCCCACCATC
    GAGGAGGTCGACTAA
    Send to
    		or

    >contig02656 Solea senegalensis hsp8-b
    ATGTCTAAGGGACCAGCCGTTGGTATCGACCTTGGGACCACCTACTCCTGTGTTGGAGTGTTCCAGCATGGCAAAGTTGA
    AATCATCGCCAACGACCAGGGCAACAGGACCACACCCAGCTATGTGGCCTTCACAGACACAGAGAGGCTGATCGGAGATG
    CAGCCAAAAATCAGGTTGCCATGAACCCCACCAACACAGTCTTCGATGCCAAGAGACTGATTGGCCGCAGGTTTGATGAC
    GCAGTCGTGCAGTCAGACATGAAGCACTGGCCATTTAACGTTGTCAATGACAGCACTCGCCCCAAGGTTGAAGTTGAGTA
    CAAGGGTGAGACAAAGACCTTCTACCCAGAGGAGATCTCCTCCATGGTGCTGACCAAGATGAAGGAAATTGCTGAAGCCT
    ACCTCGGAAAAACTGTCAATAATGCTGTAGTTACGGTGCCCGCCTACTTCAACGACTCCCAGCGACAAGCCACTAAGGAT
    GCCGGCACGATCTCTGGTCTCAATGTTTTGCGTATCATCAACGAACCAACTGCTGCTGCCATTGCCTACGGTTTAGACAA
    GAAGGTTGGTGCAGAGAGGAACGTCCTCATCTTCGATCTTGGTGGTGGAACCTTCGATGTGTCCATCCTGACCATCGAGG
    ATGGCATCTTTGAGGTCAAATCCACGGCTGGAGATACTCATCTTGGGGGTGAAGACTTTGACAACCGCATGGTGAACCAC
    TTCATCGCAGAGTTCAAGCGCAAGTTCAAGAAGGACATCAGCGACAACAAGAGAGCTGTCCGTCGTCTGCGCACAGCTTG
    TGAACGAGCAAAGCGCACACTGTCTTCCAGCACCCAGGCCAGCATTGAAATCGACTCCCTGTATGAGGGAGTTGACTTCT
    ACACCTCCATCACCAGGGCTCGCTTTGAGGAGCTCAACGCAGACCTCTTCCGTGGCACCTTGGACCCTGTAGAGAAGTCC
    CTCCGTGACGCTAAGATGGATAAGGCACAGATTCATGACATTGTGCTGGTCGGTGGCTCCACTCGTATCCCCAAGATCCA
    GAAGCTTCTCCAGGACTTCTTCAACGGAAAGGAACTCAACAAGAGCATCAATCCAGATGAAGCTGTGGCCTATGGAGCTG
    CTGTCCAGGCTGCCATTCTGGCCGGAGACAAGTCTGAGAATGTGCAGGACCTTCTGCTTCTGGACGTCACCCCTCTGTCC
    CTGGGTATTGAGACCGCTGGAGGTGTCATGACTGTCCTGATCAAACGTAACACAACCATTCCCACTAAGCAGACCCAGAC
    CTTCACCACCTACTCCGACAACCAGCCTGGTGTGCTCATCCAGGTGTATGAGGGTGAGCGTGCTATGACCAAAGATAACA
    ACTTGCTGGGCAAGTTTGAGCTGACTGGAATCCCTCCTGCTCCTCGTGGTGTTCCCCAGATTGAGGTGACGTTCGATATC
    GATGCCAACGGCATCATGAATGTTACTGCGGTCGACAAGAGCACTGGAAAGGAGAACAAAATCACCATCACCAATGACAA
    AGGTCGTCTCAGCAAGGAGGACATTGAACGCATGGTCCATGAAGCAGAGAAATACAAGGAGGATGATGAGGTCCAGCGCG
    ACAAGGTGTCTGCGAAGAACGGCCTGGAGTCGTATGCTTTCAACATGAAGTCCACTGTGGAGGACGAGAAACTGGCTGGC
    AAGATCAGTGACGACGACAAGCAGACCATCTTGACCAAGTGTAATGAGGTCATCAGCTGGCTTGACAAGAACCAGACTGC
    CGAGAAGGATGAATATGAGCATCAACAGAAGGAGCTGGAAAAGGTGTGCAACCCCATCATCACAAAGCTTTACCAGAGCG
    CCGGTATGCCAGGTGGTATGCCCGAGGGCATGCCTGGTGGCTTCTCCGGTGCTGGTGGTGCTGCCCCTGGTGGCGGTGGA
    TCCTCCGGGCCTACCATTGAGGAGGTCGACTAA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E.Sarropoulou
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