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HSP8 (Heat Shock 70kDa Protein/HSP71)

Organism
Dicentrarchus labrax (European sea bass)
Phylogeny
Paralogs
hsp8-aI,
hsp8-aI
hsp8-aII,
hsp8-aII
hsp8-b
hsp8-b
Sequencing Methods
hsp8-aI: Illumina paired end sequencing

hsp8-aII: Illumina paired end sequencing

hsp8-b: Illumina paired end sequencing
Citations
  • unpublished
  • fish-it.org.
  • Sequence >comp24422_c2_seq2 Dicentrarchus labrax hsp8-aI
    CATGAAGCACTGGCCCTTCAAGGTTGTGAACGACTCATCCAAACCCAAGGTAGAGGTTGAATACAAGGGCGAGATCAAGA
    CTTTCTTCCCTGAGGAGATTTCCTCGATGGTCCTCGTAAAGATGAAGGAGATCTCTGAGGCTTATCTTGGCAAGCCTGTG
    AGCAATGCAGTTGTCACAGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCTACCAAAGATGCCGGAACCATTTCTGG
    GCTTAATGTTCTGCGCATCATCAACGAGCCCACTGCTGCAGCCATCGCTTATGGCCTGGACAAGAAGGTTGGCTCTGAAC
    GTAACGTCCTCATCTTTGACCTTGGAGGTGGTACTTTTGATGTGTCGATCCTGACTATTGAGGATGGCATCTTTGAAGTA
    AAGTCCACAGCCGGTGACACTCACTTGGGTGGTGAAGATTTTGACAACCGCATGGTTAACCACTTCATTGCTGAGTTCAA
    GCGCAAGTTCAAAAAGGAAATCAACAACAACAAGCGAGCTGTGCGTCGTCTGCGCACAGCCTGTGAGCGTGCCAAGCGCA
    CACTCTCCAGCAGCACCCAGGCCAGCATTGAGATCGATTCACTCTATGAGGGTGCCGATTTCTACACTTCCATCACCAGG
    GCCCGTTTTGAGGAGCTCAATGCGGACCTGTTCCGTGGAACCCTGGAGCCTGTGGAGAAAGCCCTGAGGGATGCCAAGAT
    GGACAAATCCCAGATCCATGACATTGTCCTGGTGGGTGGTTCCACACGTATCCCCAAGATTCAAAAGCTGCTGCAGGACT
    TCTTCAATGGTCGTGACCTAAACAAGAGCATCAATCCTGATGAGGCTGTGGCCTATGGTGCAGCTGTGCAGGCAGCCATC
    TTGGCTGGTGATAAGTCTGAGAATGTGCAGGACCTGCTCCTGCTGGATGTCACACCCCTGTCCCTGGGAATAGAGACTGC
    TGGAGGAGTAATGACTGTCCTTATCAAAAGGAACACCACCATCCCCACCAAGCAAACCCAGACTTTCACCACCTATTCAG
    ACAACCAACCTGGTGTCCTCATTCAGGTTTATGAAGGTGAGAGAGCCATGACCAAGGACAATAACATCCTGGGCAAGTTT
    GAGCTGACTGGTATTCCACCTGCTCCGAGAGGTGTCCCTCAGATTGAGGTGACCTTTGACATTGATGCCAATGGCATTCT
    CAATGTATCTGCCGTTGACAAAAGCACTGGAAAGGAGAACAAAATCACCATCACCAATGACAAAGGGCGTTTGAGCAAGG
    AGGACATTGAGAAGATGGTGCAGGAGGCAGAGCAATTCAGATCTGAGGATGAGGCCCAGAGAGACAAGGTCACAGCCAAG
    AACTCCCTTGAGTCTCTGGCCTTCAACATGAAGAGCACTGTGGAGGACGAGAAGCTCCAAGACAAGATCAGCCCTGAGGA
    CAAAAAGACCATCGTAGACAAGTGCAACGAAGTAATTTCCTGGCTGGACAGAAACCAGACGGCAGAGAAAGATGAGTACG
    AGCACCAGCAGAAGGAACTAGAAAAGGTATGCAACCCCATCATCTCCAAGCTATACCAGGGTGGTATGCCAGGTGGTATG
    CCAGGAGGGATGCCAGGAGGGATGCCTGGTGGCTTCCCTGGTGGGGCTGGAGGCAGCTCCTCCTCTGGGCCAACTATCGA
    GGAGGTCGACTGA

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    or

    >tr0048914DLAgn00033880 Dicentrarchus labrax hsp8-aII
    ATGTCCAAGGGACCAGCAGTCGGCATTGATCTGGGCACTACCTACTCCTGCGTAGGAGTGTTTCAACATGGCAAAGTTGA
    AATCATTGCCAATGACCAAGGAAACAGGACCACGCCCAGTTATGTTGCCTTCACTGACACAGAGAGGCTGATTGGGGATG
    CAGCCAAGAATCAGGTGGCTCTGAACCCCAACAACACAGTATTCGATGCAAAGCGCCTCATTGGACGTCGGTTTGATGAT
    AGCGTTGTCCAGTCGGACATGAAACACTGGCCATTTACAGTCATTAATGATGCTTCACGCCCCAAAGTTAAAGTGGAGTA
    CAAGGGCGAGACCAAGACCTTCTACCCAGAGGAGATCTCCTCCATGGTGCTAATCAAAATGAAGGAGATTGCAGAGGCGT
    ACCTTGGGAAGACTGTAACAAATGCTGTAGTGACTGTGCCTGCCTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGAT
    GCAGGGACCATTTCTGGGCTGAATGTCCTTCGTATCATCAATGAACCGACTGCTGCTGCTATTGCCTATGGTCTGGACAA
    AAAGGTTGGATCTGAAAGAAACGTCCTCATCTTTGACCTTGGCGGTGGCACGTTTGACGTCTCCATCTTGACTATTGAAG
    ATGGCATCTTTGAGGTCAAGTCCACAGCAGGCGACACACACTTGGGTGGAGAAGACTTCGATAACCGCATGGTCAACCAC
    TTCATCTCCGAGTTCAAACGCAAGTACAAGAAAGACATCAGCGACAACAAGAGGGCTGTGCGTCGCTTGCGCACAGCGTG
    TGAGAGGGCCAAGCGCACTTTGTCATCCAGCACCCAGGCCAGCATCGAAATCGATTCTCTGTACGAGGGAATCGATTTCT
    ACACCTCAATCACAAGGGCCCGCTTTGAGGAGCTGAATGCAGACTTATTCCGAGGAACCCTGGAGCCTGTGGAGAAGGCC
    CTCCGTGACGCCAAGATGGACAAGGCTCAAATCAATGACATTGTCTTGGTGGGAGGTTCCACTCGTATTCCGAAGATCCA
    GAAGCTCCTTCAGGACTTTTTCAATGGGAAAGACCTCAATAAGAGCATTAACCCTGATGAAGCAGTGGCCTATGGTGCAG
    CTGTGCAGGCAGCCATCCTGTCAGGCGACAAATCGGAGAATGTGCAGGACCTGCTGCTGCTGGATGTGACCCCCCTGTCT
    CTGGGCATCGAGACTGCTGGAGGAGTCATGACTGTTCTCATCAAGAGGAACACCACCATCCCCACGAAGCAGACCCAGAC
    TTTTACCACTTACTCAGACAATCAGCCTGGTGTTCTCATTCAGGTGTTTGAGGGTGAAAGGGCCATGACCAAAGACAACA
    ACCTTCTGGGGAAATTTGAGCTGGTTGGGATTCCCCCTGCCCCCCGCGGGGTTCCTCAGATTGAGGTGACCTTTGATATC
    GACGCTAATGGCATCATGAATGTGTCTGCAGTCGACAAGAGCACTGGGAAGGAGAACAAGATCACAATCACCAACGACAA
    AGGTCGCTTGAGCAAGGAGGAAATTGAGCGTATGGTCCAGGAAGCGGACAAGTACAAGGCTGAGGATGATGTGCAGAGAG
    AGAAGGTGACTGCCAAGAACGGCCTAGAGTCTTACGCCTTCAATATGAAGTCCACTGTGGAAGATGAGAAGCTGAAGGGC
    AAGATCAGCGACGAGGACAAACAGAAGATTACGGACAAGTGTAACGAGGTCATCAGCTGGCTGGATAAAAACCAGTCTGC
    AGAAAAAGATGAGTTTGAACATCAGCAGAAGGAGTTGGAGAAGGTGTGTAACCCCATCATGACCAAGCTGTACCAGAGTG
    CTGGGGGAGTGCCCGGTGGGATGCCAGGTGGAATGCCAGGGGGCTTCCCCGGAGCTGGTGGGGCTCCTGGAGGAGGAGCG
    TCCTCCGGCCCCACCATCGAGGAGGTCGACTAA

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    or

    >comp22963_c0_seq2 Dicentrarchus labrax hsp8-b
    ATACCGGCAAGGACAAGTCACCCTCGCCGCTGTCCATTCCAACCAACACCTAAAGTCATCCTCGGTTCAACAATTCGGAA
    AAATGTCGAAGGGACCAGCAGTTGGTATCGATCTTGGGACCACCTACTCCTGTGTTGGTGTGTTCCAGCATGGCAAAGTT
    GAAATCATTGCCAATGACCAGGGCAACAGGACCACGCCCAGCTACGTGGCCTTCACAGACAGTGAGAGGCTGATCGGGGA
    TGCAGCCAAGAATCAGGTTGCCATGAACCCCACCAACACAGTCTTCGATGCCAAACGACTGATTGGTCGCAGGTTTGACG
    ACGCGGTTGTGCAGTCAGATATGAAGCACTGGCCATTTAATGTCATCAATGACAACACCCGCCCCAAGGTTCAAGTTGAG
    TACAAGGGTGAGTCAAAGTCCTTCTACCCAGAGGAGGTCTCGTCCATGGTGCTGACCAAGATGAAGGAGATTGCTGAAGC
    CTACCTCGGAAAAACTGTCAACAATGCTGTAATTACCGTACCCGCCTACTTCAACGACTCTCAGCGCCAGGCCACTAAGG
    ACGCTGGCACAATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAGCCAACTGCAGCTGCCATCGCATATGGGTTGGAC
    AAGAAGGTTGGGTCTGAAAGGAACGTGCTCATCTTTGATCTTGGTGGTGGCACCTTTGACGTGTCCATCTTGACCATCGA
    GGATGGTATCTTTGAGGTCAAGTCTACGGCTGGAGACACCCATCTTGGTGGGGAAGATTTCGACAACCGCATGGTCAACC
    ACTTCATCGCAGAGTTCAAGCGCAAGTACAAGAAGGACATCAGCGACAACAAGAGGGCCGTCCGTCGTCTGCGCACCGCT
    TGTGAGAGGGCGAAGCGCACCCTGTCTTCCAGCACCCAGGCCAGCATTGAAATCGACTCCCTGTACGAGGGAGTTGACTT
    CTACACCTCAATCACCAGGGCTCGCTTTGAGGAGCTCAATGCTGACCTGTTCCGTGGCACCTTGGACCCCGTGGAGAAGT
    CGCTCCGTGACGCCAAGATGGACAAAGGGCAGATTCATGACATTGTGCTGGTCGGTGGCTCCACTCGTATCCCCAAGATC
    CAGAAACTGCTCCAGGATTTCTTCAATGGAAAGGAGCTCAACAAGAGCATCAATCCAGATGAAGCTGTGGCCTATGGAGC
    TGCTGTCCAGGCAGCCATCCTTTCTGGGGACAAGTCAGAGAATGTGCAGGACCTGCTGCTTCTGGATGTCACCCCTCTGT
    CCCTGGGTATTGAGACCGCTGGAGGTGTCATGACTGTGCTGATCAAACGTAACACCACCATTCCTACAAAGCAGACCCAG
    ACCTTCACCACCTACTCCGACAACCAGCCTGGTGTGCTTATCCAGGTTTATGAGGGTGAACGTGCTATGACCAGGGACAA
    CAACCTCCTGGGAAAGTTTGAGCTCACGGGCATCCCTCCTGCTCCTCGTGGTGTTCCCCAGATCGAAGTGACATTTGATA
    TTGATGCCAACGGCATCATGAATGTCTCTGCTGTCGACAAGAGCACTGGCAAGGAGAACAAGATCACAATCACCAATGAC
    AAGGGTCGTCTCAGTAAGGAGGACATTGAACGCATGGTTCAGGAAGCTGAGAAGTACAAGGCTGAAGACGATGTCCAGCG
    TGACAAGGTATCTGCTAAGAATGGCCTGGAGTCATATGCTTTCAACATGAAGTCCACTGTGGAGGATGAAAAGCTTGCCG
    GTAAGATCAGTGACGACGACAAGCAGAAGATTCTGGACAAGTGCAACGAGGTCATCAGCTGGCTTGACAAGAACCAGACT
    GCTGAGAGGGATGAGTATGAACATCAACAGAAGGAGCTGGAGAAGGTGTGCAACCCCATCATCACTAAGCTGTACCAGAG
    TGCCGGTGGCATGCCTGGTGGTATGCCAGAGGGCATGCCTGGTGGCTTCCCTGGAGCCGGGGGTGCAGCTCCTGGTGGTG
    GTGGATCCTCTGGCCCAACCATTGAGGAGGTCGATTAAACATTCCATCACTTCGGCTGCTACTGAGATGTTTTCTAAGAA
    AGTAACCCTCTTATAGCACAAGTTACAACAAGCTAAAGAGTGCAATATAAAATAAAACCGGGTTCAGGATCACATTTATT
    GCATTGTATGCGACAACTGGGAACAACTTGTATTTGGCACAGCTGAGCTGTGAGTTCATGTGTGTTAGTGTTTTGTATGA
    GATGTCACTGCCTTGACAATAAAAACAATCTTCTAACCCAA

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    Organism

    Phylogeny (Gene Tree)

    Paralogs

    Sequencing Methods

    Citations

    Sequence


    Data input by E.Sarropoulou

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