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Otp (Orthopedia homeobox)

Organism
Solea senegalensis (Senegalese sole)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
otpa,
otpb
Citations
  • FISH-it
    		•
    Sequence >Solea senegalensis otpa
    GCACGGGTTCTTTCAGCTAATAAGCGCCTCCCCGTCGCTCTAAAGGACATTATAATGCAAGGGACCTCCCTTTTTAACCA
    CAAACTGAATTTTCGTTCATTTAGACGATATATACTTTTGAAATTGCCCCAAAGTTGTAGGATTTTTTTGGAGCGCATTT
    CACCCTGGAGCGGTACGCCATGCTCTCTCACGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCATCTGTAAACCCCG
    GCCCTAAACTCCAATGGATGAAGGATGCTGCAGAGTTACTCGGACACCGAGAGGCTCTTAAGTGCAGACTGGGAGGCGGC
    GTGTCGGACCAGGGGCATCCGGGAGACATGGCCCCTGGTTCAGACTCAGTGGAGGGAACCACTATGTTGCCGGGAGAAGA
    CATCGCCACTGTGGGCTCCAACTCTGCCGTCATGTCAGTTAACGGGAAGGAGCAGGAGAAGCAGCAGCAGCAGAGCCGCA
    ACAGAGCTCCAGTCAGTCCGCCAGTCAGCAGAAACAGAAGCGGCACCGGACACGCTTTACTCCGGCACAGCTCAACGAGC
    TGGAACGCAGCTTCGCCAAAACCCACTACCCCGACATCTTCATGAGAGAGGAACTCGCGCTGAGGATCGGCCTCACGGAG
    TCCAGAGTTCAGGTTTGGTTCCAGAACAGACGCGCCAAGTGGAAGAAAAGGAAGAAGACTACCAATGTTTTCCGCGCCCC
    GGGGACGCTGCTCCCAACACCGGGCCTGCCCCAGTTCTCTGCCGCGGCTGCCATGGAGAACAGCCTGTGCTCCTTCCACG
    CCAACGACTCTCGTTGGGCGACGGGGATGCCGGGTGTCTCCCAGCTGCAGCTACCGCCTGCTCTGGGTCGTCAGCCGAGC
    ATGGCGCAGTCTCTGTCACAGTGCAGCCTGGGCCCAGGCCCGCCACCAAATTCCATGGGTCTCTCCAACGGCCTGTCATC
    CAACGGCTCTGGTCTGCAGTCCCACCTCTACCAGTCGCATTTCCCCGGAATGTCGGCTTCTCTCTCTGGCCCCACGAACG
    TATCGGGCTCCCCGCAGCTGTGTAGTTCCCCGGACAGTGACATGTGGAGAGGGACAAGCATCGCGTCACTGCGGCGCAAA
    GCGCTGGAGCACACAGTGTCCATGAGTTTCACTTAGTGACCCAATCCCAGCACTCACCCTGTGGCTCATTCCCCGCTTCC
    GCCATTTAGATCAACACGAGAGAACGAACGAGCTAAAAGGGACTTAAATGTGAGGAAAATGGAGACTGTGTGTGTGTGAC
    TTCATCTAGACATAATGACAAAAGAGGGACGGACAAATGGAAGAAAAAAATGACTTGAGTTTGTTATTTATCTTATTAAC
    TCAAAAAGGATTTTATCAGCTATTGATAATAAATATTGTATTGATCTCTAGACTATAGGCCCTAATTACCGAGAGCCAAC
    CAATTGTCGTATTTGCGTTTTCATTGAGTGTGTCTTTACGCACACGTTATTGTGTTCAGGTGAAGTTGTGTTATGTCAAA
    CGGTTATTTATAAGATTTGGTATACATTTTTGTAACAGCCTACCAACACACGCACCACATACTGTAGGTGGGCCTATGGG
    TCTCGGGCATGCACAGTGCATGTGGACTTAAACACTTGGGTCATTTCTGGTGAAAATGGTTCCCACTCAGATTGAACAGA
    GATACTTTTGAGGCGACTCGTCTGCATGAGACGGGAGCGTAAATCTAAAGAGGAAACATATATACAACAGTACACTTATC
    TTTCAGTAGGCCTACTATGTTTTAGGATGTTTTGTGTAGATGAAACATTCTTGCTATGTACCCGCTGGTCTTTTTTGTGA
    CATGTTTTAACTTATTGTATGTGCTATTACTTGACACATTTCTTAAGTGTTTGATCTTTCATCGAAATGCACCACATTGA
    CGGGGTTTGTACCAATTTAAAAATGACAAACGAATAAAGGTAATTTTCAAGAATGTCAACACAAGGATGATTCGTGTCTC
    CATTATCTGAGGACAGTGTCGTGCTATCGTCGGTATGACCTATACCGAGTTTTCTTGTGTCGTCAAAATATGCAGTTTTT
    CTTGCGTAAACGTGTGCGGTCGGTGCTCTGCACAGGGACCTAAAGATTTATTTATTTAGGCTATTTATTGGAGTTGGTGC
    GGTGGCCGGGGTTGAGTCTTTTTTGAAGGGTGAATGGTTCCATGGTGCAGGCAGACAGCAGCGGTAAAGATGTCAGTGCT
    GTAATGTGACGGTCATTGCTTTTATTTTAACCATGACGGTCATCTCACTGATCACACTGGATGCACTGTAACTATATATG
    GGCGAGCCACTGTCAACACTAGACTATAAAGTTTTAAGTTTCCTGCCATTAACTATCTATAATGTAATTTATTAGAGCTA
    AAGTCAAGGTTTTTTCCTCCTAATTTT
    Send to
    		or

    >Solea senegalensis otpb
    GACATATTGGACAGACCCATGGCCCAGTCTCTGTCCCAGTGCAGCCTCGGCGCGGGGCCTCCGCCGAACTCCATGGGTCT
    GTCCAATATGTCGTCCAACGGCTCCGGGCTGCAGTCCCACCTCTACCAGCCCACTTTCCCCGGGATGGTTCCCGCCTCCT
    TATCCGGCCCCACCAACGTGACCGGCTCGCCTCAGCTGTGTAGCTCCCCGGACAGTGACATGTGGAGAGGGACAAGCATC
    GCGTCGCTGCGCCGCAAAGCGCTGGAGCACACAGTTTCCATGAGTTTCACCTAGTGCGAAGAAGAGCAGGAGAGATTTTC
    TTTCCCTTTTTTGTTGTTGTTTTTCCTCCTTCTGCATTCGCTCCTTCTTACCTTGTCCATCCGCCGGGAAAACTACACCC
    AGGATACCTGTTCTCATGAGCGCGCAGCGGCGCACCTGGCGCTACTTTTTCTCCCACATCAGAGACACAAAGAGGGGAAA
    ACTGAAGCTTTAGGGCTGCTTCTGCTATGAGCTATAATTTATAATTTCGCATGTATATGACGACTATTTATTTGTCCATT
    TAAATGAATTCCTCGCCTTTGCTATTTATTTATTATTTCTTAGGTATTTATTTATTTATTTATGCTGCTGTTGCAGGGCA
    GACCTTTTTTTTTGCTTATTGGCGACTCGACGACTTATGAAGACAAAAAAAATGTCTTGTGGATATACTTTGAAACACAA
    AACTATATAGGTGACACCTTTTTTTGTTGTTTTTCTTTATTTCTCAAACCTGCTGCACAGCATGCAACTGTGAAGGGGCC
    AAAAAGACACAAAAGACACCTACGTTTAAAGAAAAAGAAAGAGAAGAAAAGAATGAGCACATGAGAGATTCATCAGGAGA
    GAAGGGAAGAAGGAGGAGCCTGAAAGTGGGACTTGACTGCATGTGCTGTCCAGGGGAGAAAAAAATAAATGATTAAATGA
    AAAAAAATAATAAGGGAAATTCTACAAACTAAGACATGGAAACTGACTCTAACTATAATCTGTTATATAGGATGTTTTGT
    GTAGGGGAAGCACTCTTGTTCCCATTTGGTCAGTTTGTGATACATTCTGTTCCCAGGATTATGTCTGTGCTTATTATGAT
    TATCAAATATGACTTTTCTTAAATGTTTGAGCCATTTTCTCTTTGTTTTGTTCCTTACATGGACATGTTTATATCAATTA
    AGTGTAAATGGTCAAATAAAAATCATTTTCAATTATGGCACCGTGGTGAATCAAACCTCTTTTTCTTGCTCGAGTTAAAA
    GTGTAATATC
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E. Sarropoulou, E. Kaitetzidou
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