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CTSB (Cathepsin B)

Organism
Salmo salar (Atlantic salmon)
Phylogeny
Paralogs
Sequencing Methods
ctbs-a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012335291.1) annotated using gene prediction method: Gnomon, supported by EST evidence.

ctsb-a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012336042.1) annotated using gene prediction method: Gnomon,supported by mRNA and EST evidence.
Citations
  • fish-it.org.
    		•
    Sequence >XM_014205417.1 Salmo salar ctsb-b
    ATGTGTCGTCTGGCCCTCCTGTGTCTTCTCTCGGCCCTGTCTGTTAGCTGGGCTAAGCCCCGCCTTCCTCTACTGTCTCC
    TGAGATGGTTCAGTACATCAACAACGCAGACACCACATGGGCGGCTGGCCAGAACTTCCACAACGTTGACATCAGTTATG
    TGAAGAGTTTGTGTGGAACCCTGCTGAAGGGACCCAGGCTGCCAGAGCTGGTGCAGTCTGATGAGGACATGAGTCTGCCA
    GACAGCTTTGACGCACGGCTGCAGTGGCCCAACTGTCCCACCATCAAAGAGATCAGAGACCAGGGATCCTGTGGCTCCTG
    CTGGGCCTTTGGGGCAGCTGAGGCCATCTCCGACAGGTATTGTATCCATAGCAATGGCAAGGTCTCCGTGGAGATCTCAG
    CTGAGGACCTGTTGTCATGCTGTGATGCCTGTGGCATGGGGTGTATGGGGGGCTTCCCATCAGCTGCCTGGGACTACTGG
    GCTGACTCTGGGCTGGTTACAGGGGGGCTTTACGGCTCCAATATAGGCTGCAGACCTTATAGCATCGCTCCGTGTGAGCA
    TCACGTGAACGGAACCCGCCCCCCCTGCATAGGTGAGGGGGACACCCCTAAGTGTGTGTCTGAGTGCAACGCTGGATACA
    CCCCCTCCTACGTGAAGGACAAACGCTTCGGAAAGCAGACGTACAGCGTTCCCTCGAAGGAACAGCAGATCATGTCTGAG
    CTCTATAAGAACGGCCCAGTGGAGGCAGCCTTCTCTGTCTATGAGGACTTCCTCCTTTACAAGACAGGTGTGTACCAGCA
    TGTGACTGGACAGATGCTGGGGGGTCATGCCATCAAGATCCTGGGCTGGGGAAAGGAGAATGACACCCCCTACTGGCTGG
    TTGCCAACTCCTGGAACACAGACTGGGGTGACAATGGGTTCTTCAAGATCCTGCGGGGAAAGGATGAGTGTGGCATCGAA
    TCAGAGATAGTGGCGGGGATACCCCGGCTTTAG
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    >XM_014211515.1 Salmo salar ctsb-a
    ATCAGGGAGGGCCATGACACGTCACGTGGTCCTCCTCTGATTTAAAGGTCAACTGAACGTTAATACACGACACTTTGCCA
    GGTGGTTTAGGACAAGTCATTTTTTTACAAGTGTACTGTAACTGGTCTTCGGCACGTCTGACAAGCAGATAACCGGAAGT
    GATGTGGCGTGTGATATTTTTGGCGCTGGTGTCTGGGCTGTCAGTCAGCTGGGCCTGGCCCCGCCTACCTCCGCTCTCCC
    ACCAGATGGTGGACTACATCAACAAGGCCAACACTACATGGAAGGCTGGTCCCAACTTCCATAATGTGGACTACAGCTAC
    GTTAAGAGACTGTGTGGAACCCTGCTTAAAGGACCCAAACTGCCCACCATGGTGCAGTATGCAGGGGATGTGGAGCTGCC
    TGACACCTTTGACCCCAGACAGCAGTGGCCCAACTGTCCCACTCTGAAGGAGATCCGGGACCAGGGCTCCTGTGGCAGCT
    GCTGGGCGTTTGGTGCTGCGGAGGCCATCTCAGACCGTGTGTGTATCCATAGCAACGCCAAGGTCAGCGTGGAGATCTCC
    TCTGAAGACCTGCTCAGCTGCTGTGACAGCTGTGGCATGGGTTGTAATGGTGGCTATCCCTCTGCTGCGTGGGACTTCTG
    GACTACAGAGGGGCTGGTCACTGGAGGACTCTACGACTCTCACGTTGGCTGCAGGCCCTACTCCATCCCTCCCTGTGAGC
    ACCATGTTAACGGCACACGACCCCCCTGTACAGGAGAGGAGGGTGACACCCCACAATGTTCCAACCAGTGTGAGACTGGA
    TACACACCTGGCTACAAGCAGGACAAACACTTTGGTAAGAATTCATACAGTTTGCCCTCTGAAGAGCAGCAGATCATGGC
    TGAGCTCCTGAAGAACGGACCTGTGGAAGGAGCTTTCACTGTCTACGAAGACTTCCTGCTCTACAAGTCTGGTGTGTACC
    AGCATGTCTCTGGCAGTGCAGTAGGAGGACATGCCATTAAGGTCCTGGGCTGGGGAGAGGAGGGGGGAACTCCTTACTGG
    CTGGCTGCTAACTCCTGGAACACTGACTGGGGAGAGAATGGTTTCTTTAAGATCCTGAGAGGTAAGGACCACTGTGGCAT
    CGAGTCTGAGATGGTGGCTGGAGTCCCTTTGTAACCATGACAACAGTAACCAGGAAGTGATTTCAGAGACTGCTGCAGAT
    GCACCAGTCCTCTCCACTAGAGGAAACCATCTTTCTGCCTGCCTTTCTGGCCTTTACACTGGTTCTAAGTCCCAATCATC
    CCCTAGCCCCGCTAGACCTCTTTAGTTCCAAAATAATTGGTTTAGAAAATGCTGCCCTGTCTGAGGGAAAGGCCGGAGCT
    ACTACCATGTTGCTTATACCTGTCCTACTACCGTATAGGTCATACCTGTTCCTGATTCCTCATCAGATCTGAGAATTGTG
    TAAGAGGAGTGCCTAGGGGTTGACTTGGAACTGGGCATATGTGAACCATGGCTTTGTCTTTAGTTAAATGTGTTCTTCCT
    GGTGTCTCAATCTGTAGTGGCTTCTTCCCCTCATATCCACTCTGTCAGCTCCACTGATCTGAAAATGCAGGATGGGTGAA
    AGGTACCTGTGCAGATTGAGAGGAAGCTACAGACTATTGAGAACCCCCCCCCCCCCACAGTGAGTGACTCCGTAGAGGTC
    CATCTTGCTTCCTGTTTGTTTGGTCACAAGCCGTGCTAAAAGTCCTCTCTCCCTGTAGTTCACATCAATTTAAAAATGTT
    CATGTATGATGCTTAGCTTTTTATTTTTTAATTCGATGTGATCACTGATGGCATTGTGCACATTTCGTTTTTAAATTGGA
    TTATAAGGGAAGCGTGAGTGGTTTTGTACTGATGGGATTGTTTTTTGTTGAATGCGGTGTCTTTAATGCTTCTCTGTTTT
    GATCAAGTGTTCTGGAATGATTGAGTTGCATTAATTAAAAATCAACCAATATGTTTAACTTGGTCTCAATTGGAGTGGCT
    TAAACTCCTGTTCTCCCTGCCCTGCAAGACATGCAGTCGTCACCAAAGTGCTTATACAGATACCAGCCTAAAACCTCACA
    CCCCACTACTTTCACTTAACTGTGCGGTGACATTTAGAAGGTATGTTTGTGTAGGAATCCCTCCGCCGAGTGACTCTTAG
    AGCAGCAACAAAAGTGAGTGGACATGACCTGTTTTAACAAACCAGGTACAACCAGGCTGTTGGTAGACCAAGAAACCATG
    TGATCACTACCTACACAGTAATAAAGTTAGCATTTGTA
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    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

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    Data input by E.Sarropoulou
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