Home BLAST Help About  

Otp (Orthopedia homeobox)

Organism
Salmo salar (Atlantic salmon)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012340926.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence(NW_012337073.1) annotated using gene prediction method: Gnomon.
Citations
  • fish-it.org.
    		•
    Sequence >XM_014174930.1 Salmo salar otpa
    TCTATTCTGATTGGCTCTTACTTGAAGAAGCTCATGGGTTCTTTCAACTATTAAGTGCCTCCCTATCGCTCTAAAGGACA
    TTATAATGCAAGGGTCCTCCTTTTTGAGCACAAATAGAATTTTCTTTCATTTGGAGGATATATAGCTTACTTAAAAAATA
    TATATTTAAAGTTGTAAGGTAGACCACATTTGTAAGGTGGACCATATTTCGCACTGGAGCGGTGCGCCATGCTCTCTCAC
    ACCGATCTCCTGGATGCTCGGCTCGGTGAGTTATCATCGCAAAACTCCGGTCTTCAACTATACTGGATGAAGGATGCTGC
    GGAGCTGCTGGGGAACCGAGACCCGATGAAGTGCCGGCTGAGCGGTGGGGTGGCGGACCAGGGAGACATGGACCCTGGCC
    CGGACACGGTGGAGGGGGCCACCTTGCTGCCCGGGGATGAAATCCCCACAGGTGGATCCAACCAGCCGGGCATGCCGGTA
    AACAGTAAGGACACTGAGAAACAGCAGCAGCAACAGCAGCATAATTCTAGTCAGACTGCGAACCAGCAGAAACAGAAGCG
    GCATCGAACGCGCTTCACCCCAGCTCAGCTGAACGAACTGGAACGGAGCTTCGCCAAGACCCACTACCCAGACATCTTTA
    TGCGTGAAGAGCTGGCGCTGAGGGTCGGCCTCACCGAATCCCGTGTGCAGGTGTGGTTCCAGAACCGCCGTGCCAAGTGG
    AAGAAGCGTAAGAAGACCACCAACGTGTTCCGCGCCCCTGGCACTCTGCTACCAACGCACGGCCTGCCTCAGTTCTCTGC
    TGCGGCTGCCATGGAGAACAGCCTGTGCTCCTTCCACGCCAACGACTCCCACTGGGCCACGGGGATGCACGGGGTGTCCC
    AGCTCCAGCTCCCCCCGGCCCTTGGCCGCCAGCAGGCGATGGCCCAGTCCCTTTCCCAGTGCAGCCTCGGGGCCGGCCCG
    CAGCACAACTCCATGGGCCTGTCCAACGGCCTTTCCTCCAATGGCTCAGGCCTGCAGTCCCACCTCTACCAGCCCCCGTT
    CCCCGGGATGCCCGCCTCCCTCTCCGGTCCAACGAACGTGTCAGGTTCGCCACAGCTGTGTAGCTCTCCGGACAGTGACA
    TGTGGAGAGGGACAAGCATTGCCTCACTGCGACGCAAAGCGCTCGAGCACACAGTGTCCATGAGTTTCACTTAATGACGT
    TTGAAGATGACCCCCTTTGTTTAGCTTTTAGCTGTACCCCGCCATTTTAAGAAATACCTGTGTGAAGACTACTCAGGACT
    CAAAGTATTTCATGAGAATAACAATGAAATAGAATGGCCAGACTGGAGTCTGAGTTGTGTTCAGATGTCATAATAAAAAA
    CCCAGATGACATTGGCTTGTAAATTTGGTGAAGTGGACGTGAGAAATAGGCTAATTTACCTGCGTCTCAGAATGTCTGTT
    TATCTTAACGTCCATTTTCCCAAAAATGATTATATCACCTATTCATAATTATATTGTCATTATTTGGCCAAGAATCCTTG
    TCATTTTCTATTTTTCATTAGGTGTGGCTGTTGCACACCATAGGAAAGTAAGATATCATGTCAGTGAATTTATTTGTTTT
    CTAAGCTGTTAAATGCTTTAAATTAAGTTGGGAATCAGATTTCGAAATGCCACATGTACTGCATGTTTGAATGGGTCTGA
    TGCATGCGCAGTGAAGTGGATTTGACCCCTGAAATAGCCTATTTTTCTTCTTCTGCCTCGTTCCCGAAATGCCCACTTGA
    TCACTTCTTATGGATTTAAGAGAATGGAAATGGTGTAAGGACTGTTATGTAGACTCTGACTCTGTTCCAATATCCACACT
    AGCATAGGCTACTTTGAAGAAATGTACTGGTCATGCATTCTAAGTGGTATATAAAGGTCTAGCAATCTTTTTGTTTTACA
    TCTATGCTGGGAAGTGCATAGAGTGCATAAGATTGTCTGGGAGTGGTATGATTGGGAGGAGAAAACAGAACATTTGCTGT
    TATTGGCAGAGAAACTTGGAACTCAATTTACCACCTGGTGATAAAAAAAACTCCATTCTAACAAAACAGGCTGAAATTTC
    AGGCAGTCTTTTCAAACAGCCCTAACAATAATAGGTAATTTTCATAATTTCGCAGTATGATTGCAACCTAATAGTGTGGA
    AATATATATAAAACAGAGTATCACGTTTTTGACTCACTGGGACTTTAAGAAAGAAGAGTGAAAAAGAAACAAACAAACCC
    ATTTCTACATAGTCAGACTCATCTGCATGTGTTGGCCACGTGAAAAATGGGGGTATTAACATTTATAAGACAAGAAAATG
    AACCTTTAAGTAACCTGTTCTAGGATGTTTTGTGTAGATAAAGCATTCTCGTACCCACTGGTCTGTTTGTGATATGTTTT
    AACTTATTGTTTGTGCTTTTCTTAAATGTTTGATCTTACACCAAATTGCATCACAATGTTTCCTTGAAAGGCTTATATTA
    ATTTATTGTAAGTGGACAAATAAAATCATTTTCAATATGTCAAA
    Send to
    		or

    >XM_014128249.1 Salmo salar otpb
    TTAACCACAAACCGAATTTGCTTTCATTTAGTCTATATATATTTTTTAAATAGGTTAAAGTCATAGAGATTTTTTTTGGA
    ATAGCATTTCGCCCTGGAGCGGTGCGCAATGCTTTCGCACGCCGACCTCCTGGATGCTCGCCTCGGTGAGTTATCATCGC
    CAAACTCCGGTCTTCAACTCTACTGGATGAAGGATGCCGCGGCGGAGCTACTGGGTCACAGGGAGGCTCTGAAGTGCAGA
    CTAGGAGGTGGAGTGGGATCTGACCCCGGCCACTCCAGTGAGCTAGCCCCGGGGCCAGACACCGTGGAGGGGGCTACCAT
    GCTCCCTGGAGACGATATCAACAACGGAGGATCCAACCCTTCCGGCATGCAGGTCAACAGCAAAGAGCAACAGGACAAGC
    AGCAGCAGAATAACTCCAGCCAATCCGGAGGAAGTCAGAGTCAGAGTCAGAAACAGAAGCGCCACCGGACCCGGTTCACC
    CCGGCCCAACTTAACGAACTGGAGCGCAGCTTCGCCAAAACGCACTACCCAGACATCTTCATGAGGGAGGAACTGGCCCT
    ACGGATCGGCCTAACGGAATCTCGCGTGCAGGTTTGGTTCCAGAACCGACGTGCCAAGTGGAAGAAGCGCAAGAAGACCA
    CGAACGTCTTTCGCAACCCGGGGACGCTGCTGCCCACCCACCACGGCCTGCACAGCCAGTTCAACTCTGCCGCTGCCGCC
    GCCGCGGCCATGGGCGACAGCCTATGCTCCTTCCACGCCAACGACACACGATGGGCTACGGCAGGGATGCCAGGCGTCTC
    TCAGCTGCAGCTCCCTCCAGCCCTGGGTCGCCAGCACCAGCATGCCATGGCACAGTCCCTGTCCCAGTGTAGCCTGTCCG
    GTCCGCCGCCCAACTCCATGGGGCTATCCAACATGTCGTCGAACGGATCCGGGCTCCAGTCTCACCTCTACCAGAACCCG
    TTCCCTGGGATGGTCCCTGCCTCCTTGTCCGGTCCCACCAACGTGACGGGCTCGCCCCAGCTGTGTAGCTCCCCAGAAAA
    TGACGTCTGGAGAGGGACGAGCATCGCCTCCCTGCGGCGCAAAGCGCTGGAGCACACAGTATCCATGAGTTTCACTTAGT
    AGTAACCACCACTAATCCAACGGCCACGTTTTACGCGTTTTTGTTTTGACTTCGTCTTCTTCTATAATTTTTTGTTTTGT
    TGTTGAACCCATCCAGCCAAATACAGCTGGGCAAGGATGTGAATGTCTCCAAGCAAAAAAGCAACAGGAAAATAACAGCC
    CTATTCCCCAGTTTTGTTGCCAAACTAATACTGAAACCAAACAATTTGAAGGTGGATAAATGGGTAAATGTTTATGTTAT
    TAATTTATGATGTGCATGTATTGATGACAACTTTATTTATTTTACATTTATAAAGGCTATATTTATTTATTTACTTATCA
    ATGTATTTATTTATTTATTTATAC
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E.Kaitetzidou
    CLICK IMAGES
    FOR LARGER SIZE