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Otp (Orthopedia homeobox)

Organism
Cynoglossus semilaevis (Tongue sole)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007585090.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007585090.1) annotated using gene prediction method: Gnomon.
Sequence >XM_008335960.1 Cynoglossus semilaevis otpa
ATGCTCTCACACGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCGTCAGTAAACTCCGGCCCTAAACTCCAGTGGAT
GAAGGATGCGGCGGAGTTGCTCGGACATCGAGAAGCTCTCAAGTGCCGGCTGGGAGGTGGAGTTGCAGACCAGGGACATC
CGGGAGACATGGCCCCCGGTTCGGACTCTATAGAGAGAACGACTCTCCTGCCGGGAGAGGACATCACCACCGTTGGATCC
AACGCTTCTGGCATGCCGGTGAACGGGAAGGAGCCGGAGAAACAGCAGCAGCAGCCTCAGCAGCAGCCGCAGCAGAGCTC
GAGTCAATCCGCCAGCCAGCAGAAACAGAAGAGACACCGGACGCGCTTTACTCCCGCACAGCTGAACGAGCTGGAGCGCA
GCTTCGCCAAGACCCACTACCCTGACATCTTCATGAGGGAGGAGTTGGCGCTGAGGATCGGACTCACTGAATCCAGAGTT
CAGGTTTGGTTCCAGAACCGACGCGCCAAGTGGAAGAAAAGGAAGAAGACCACCAATGTGTTCCGCGCCCCGGGGACGCT
GCTCCCAACACCCGGTCTGCCACAGTTCTCTGCCGCGGCCGCCATGGAGAACAGCCTGTGCTCTTTCCACGCCAACGACA
CACGTTGGGCCACGGGTATGCCGGGCGTGTCGCAGCTCCAGCTCCCGCCCGCCCTGGGTCGTCAGTCCGGTATGGCCCAG
TCTCTGTCACAGTGCAGTTTGGGTCCAGGCCCGCCGCCAAACTCAATGGGTCTCTCCAACGGCCTGTCTTCCAACGGCTC
CGGTCTTCAGTCCCATCTCTACCAGTCGCCTTTCCCTGGAATGTCGGCCTCTCTCTCCGGGCCCACGAACGTATCGGGTT
CCCCGCAGCTGTGTAGTTCCCCGGACAGTGACATGTGGAGAGGGACAAGCATCGCGTCGCTGCGGCGCAAAGCGCTGGAG
CACACAGTGTCCATGAGTTTCACCTAGTGAACTCCCCCAGACCCACTCTGGGACTCATTTACGTCCTGCTCCATTTAGAT
CGACACCAGAGAATGAGGGCGAGTTAATCAGGATTTAACTGGGAGGAAATGGAGAGCGGGTGTGACTTCATCTAGACTTA
ATGACAAAATGAGGACGGTCAAAGGGAATGGAAATTAAAACTTAATTTTGCGGTTATTTATCTCGTTACCTCGAAGGGAT
TTTATCAACTACCGATAATAAATATTGTATTGATCTTTAGACTGCAGGCCCTACTTACTGTGAGCCAAAAAATATCGTGG
TATTTATTTTCCCTTCGGTGCGTCTTCACGCACGTGTTATTGTGTTCAGGTGAAGTTGTGTTTATGTCAAACGGTTGTTT
ATTAAAATTTGATATACATTTTGCGTAAGAAAAAAACCGACCAAAATCCGCACCGTATCATAGGTGGGCCTGTTGAACTG
GGTCAGAAGTGCACTGTGCATGTGGATTTAAACACTCGGATCATTGGAGGAGAGAATGGTTCCCACTCAGATTGAGCAGA
TACCCATGAGGTGACCTCGGTCCTCGGACCTCTGCAGGAGACACAGGAGCATCAATCAAAAAGAAGAAAAACGCAAATAT
ATATACCATGATCGTTCAATAGGCCTTCCATGTTTTAGGATGTTTTGTGTAGATGAAACATTCTTGCTGTGTACCGCTGG
TCTTTTCTGTGACATGTTTTAACTTATCGTATGTGCTATTACTTGACACATTTCTTAAATGTTTGATCTTACATCGAAAT
GCACCACACTGACGGCTTTGTACCGATTTAAAAATGACAAACAAATAAAAAGGAATTTTCAAGAAC
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or

>XM_008325701.1 Cynoglossus semilaevis otpb
TTTAGGCCATATATATTTCTTAAATAGGTTAAAGTCATAGAGATTTTTAGTGGGAATAGCATTTCGCCCTGGAGCGGTGC
GCAATGCTATCTCATGCCGACCTCCTGGATGCTCGCCTCGGGATGAAAGATGCCGCGGCGGAGCTCCTGGGTCACAGGGA
GGCTCTGAAGTGCAGGCTGGGCGGAGGAGGACCAGACCCGGGACACTCCGCAGAGCTCGGCCCGGGTCCGGACGGCGTGG
AAGGGGCCACGATGCTACCCGGTGATGATATCAGCAGCGGCGGAGGAACCAACCCGGTGCAGGTCAACAGTAAAGAGCAG
GAGAAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGAACAACAGCAGCAACAACCCAAACCAGTCTGGAGGACAACAATC
CCAGAAACAGAAGCGACATCGAACCCGCTTCACCCCGGCGCAGCTCAACGAGCTGGAGCGAAGCTTCGCCAAAACGCACT
ATCCAGACATCTTCATGCGGGAGGAGCTGGCGCTGAGGATCGGCCTGACGGAGTCCAGAGTGCAGGTCTGGTTCCAGAAC
CGTCGGGCCAAATGGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGCGCTCCGGGCACACTCCTGCCCACTCACCACGG
CTTGCCTCAGTTCCCTTCTGCCGCGGCGGCAGCGGCGGCGGCCATGGGCGACAGTCTGTGTTCGTGCCACGCGAACGACA
CCCGCTGGGCCACAGCCGGGATGCCCGGCGTGTCCCAGCTACAGCTGCCACCGTCCCTGGGCCGCCAGCAGGCCATGGCC
CAGTCCCTCTCTCAGTGCAGCCTCGGCGCTGGGCCGCCGCCCAACTCCATGGGTCTGTCCAACATGTCGTCCAACGGCAC
TGGGCTGCAGTCGCACCTCTACCAGCCCACTTTCCCCGGAATGGTACCCGCGTCCTTATCCGGGCCCACCAACGTGACCG
GCTCGCCTCAGCTGTGTAGCTCCCCGGACAGTGACGTCTGGAGAGGGACAAGCATCGCGTCGCTGCGCCGCAAAGCGCTG
GAGCACACAGTATCTATGAGTTTCACCTAGGCCAGCGTTCTCCTTCTGCATCCCGATCCTTATCAACCCCCGGAGAAATA
AAAACAGGATTCCCACAGAGACGCAGCTGTGTCCTCACAGACCGGAGGAGACCCTCAGCTGTCCACCATCACCCCCCGCC
CCCATTCTTGGCCTTTATTACGCAAAAAGTGCTGGTTCTGTTTAAAGCTATAACTTATTATTTCGCATGTATTCTATTTA
TTTGTCTATTTAAACTATAACTTATTTGGTTGAAACACTGTTTATTTGGCTCTAGCGTTTCTATCGCAGGGCTTCTTGGT
GACCCGACGACTACGGAAGTGAAGAGGAAATGTCTGTGGATAATTTGAAACACTGAACTATAGATGACACTTTTACGTCA
TTGCGGTCCTCTCTGCTTTACCACATCTCTGAGGAGGCCACATGTACGCACGGTGGAGTGAGAGAGCACATGGCAGACTC
GGCAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGGAGAGATGATTGAGTCTGGAAGAAGACTTGACTGCATGTGCTGTCCA
GAAGGGGAAAAAATAATAATGAGAAAATAAAAGAAAAATGAGGGAAATACCACGAACTGTCCATGGAAACTGACTATAAT
CTGTTATATAGGATGTTTTGTGTAGGGGAAACACTCTTGTTCTTATTTGGTCCGTTTGTGATAACTTCTGTTTCCAGGAT
TATG
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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