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Otp (Orthopedia homeobox)

Organism
Fundulus heteroclitus (Mummichog)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012234342.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012234337.1) annotated using gene prediction method: Gnomon.
Sequence >XM_012869968.1 Fundulus heteroclitus otpa
TCATTTAGACGATATACTTTTTTAAATTGCTCCAAAGTTGCGGGATTTTTTTCCGAGCGCCTTTCACCCTGGAGCGGTAC
GCGATGCTCTCTCATGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCATCACTAAACTCCGGCCCGAAACTCCAGTG
GATGAAGGATGCTGCGGAGCTCCTCGGACACAGAGAAGCTCTAAAGTGCCGACTTGGAGGCGGAGTTCCGGACCAGGGGC
ATCCGGGAGACATGGCCCCTAGTTCAGACTCCGTAGAGGGCACGACTCTCCTGCCGGGGGAAGATATCACCACCGTGGGT
TCCAACTCTACCGGCATGCCGGTGAACGGGAAACAGGAGCAGGAGAAGCAGCAGCAGCAGCAACAACAGCCGCAGCAGAG
CTCCGGTCAGCCAGCGAGCCAGCAGAAACAGAAGCGGCACAGGACGCGCTTCACCCCGGCGCAGCTCAACGAGCTGGAGC
GCAGTTTCGCCAAGACCCATTACCCCGATATCTTCATGAGGGAGGAGCTGGCGCTGAGGATCGGCCTCACCGAATCTAGA
GTTCAGGTTTGGTTCCAGAACAGACGAGCTAAGTGGAAGAAAAGGAAGAAGACGACCAACGTGTTCCGCGCTCCGGGGAC
GCTGCTCCCAACGCCTGGCCTGCCGCAGTTCTCCGCGGCGGCCGCCATGGAGAACAGCCTGTGCTCGTTCCACGCCAACG
ACTCGCGCTGGGCCACGGGGATGCCCGGAGTCTCCCAGCTGCAGCTCCCTCCGGCCCTGGGCCGTCAACCGGGCATGGCG
CAGTCCCTCTCGCAGTGTAGCCTGGGTCCCGGCCCGCCGCCAAACTCCATGGGCCTCTCAAACGGCCTGTCCTCCAACGG
CTCCGGCCTGCAGTCCCACCTCTACCAGTCGCCTTTCCCGGGAATGTCGGCGTCCCTCTCCGGCCCCACGAACGTATCGG
GCTCCCCGCAGCTGTGTAGCTCCCCGGACAGTGACATGTGGAGAGGGACAAGCATCGCGTCGCTTAGGCGGAAAGCGCTG
GAGCACACAGTGTCAATGAGTTTCACTTAGTGACTTTTCCGCTCACCTCATCCTGCTCCCCCCGGCTTCTTGTCCCAGAT
CCACCGTGCGCCTTTATTCTGTTTTTACTCCCGTTGTTTAGATCGAAATGAGAGAACGGAATGGAAACGAACGAGACAAA
AATGAAATGATCGGGAATAATGCGTTTGGGGTTGTTTATCTTGTTATTTTAAAAAGGACTTTATCAACACTTGATGATAA
ATGCTATTGTATGATCACTAGAATATAGGTCCTGATTAATGAGAGCCAAACAATCGTTGTATTTGCGTTTTCACTAAGTG
TGTCTTTACGCACACATTAATGTATCCAGATGACGTTGTGTTTTGTCGATCAGTTATGCTAAAATCAGTCAGTCCCCACT
TCAACTGTGAGCCTTTAGGACTGCATCTCAGGCATGCTCTGTGTGGGTGAATTTTGCCCCCATGTTGAAGGGAGAAACGG
ACCCCCACTCACACTGAGGACCCCAGCCTCGAAATCAAATCCAATTCGCAAAACAGAAAAATGTGAACAAAACAACGACC
TATACCCTGTTTTAGGATGTTTTGTGTAGATAAAACATTCTTGCTGTACACGCTGGTCTTTTTGTGACATGTTTTAACTT
ATTGTATGTGCTATTATTACTTGACACATTTCTTAAATGTTTGACCTTACATCAGATTGCACCATACTGACAGGTTTGTA
CCAGTTTAAA
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or

>XM_012869601.1 Fundulus heteroclitus otpb
TAGTCTTTTATTTTTTTTTTTCGTGTGTGGGAATAGCATTCCGCCCTGGAGCGGTGCGCAATGCTTTCTCACGCCGACCT
CCTGGATGCTCGCCTCGGGATGAAGGATGCTGCGGCGGAGCTCCTGGGCCACAGGGAGGCTCTGAAGTGCAGGCTCGGCG
GCGGAGGCGGCGGCGGACCCGACCCGGGACATTCCGGGGAGCTCGGCCACGGTGCGGACGGCGTGGAAGGAGCCACGATG
CTCCCCGGTGACGACATCAGCGGCGGCGTCGGCTCCAACCCGGTGCAGGTGAACAGCAAGGAGCAGGAGAAGCAGCAGCA
GCAGCAACAGCAACAGCAGCAGCAGAACAACAACAGCAGCGGAAATAACCAGAACCAGTCCGGAGGGCAGCAGAGCCAGA
AGCAGAAGCGGCACCGGACCCGCTTCACCCCGGCGCAGCTCAACGAGCTGGAGCGCAGCTTCGCCAAGACGCACTATCCA
GATATCTTCATGCGGGAGGAGCTGGCTCTGAGGATCGGCCTGACGGAGTCCAGGGTGCAGGTCTGGTTCCAGAACCGGCG
CGCCAAGTGGAAGAAGCGCAAGAAGACCACCAACGTGTTCAGAGCGCCGGGCACGCTCCTGCCCACGCACCACGGCCTGC
CCCAGTTCCCGTCCGCGGCGGCCGCGGCCGCGGCCATGGGCGACAGCCTCTGCTCCTTCCACGCCAACGACACCCGCTGG
GCCACGGCGGGGATGCCCGGCGTGTCTCAGCTGCAGCTGCCGCCCGCTCTGGGCCGCCAGCAGGCCATGGCGCAGTCCCT
GTCCCAGTGCAGCCTCAGTGGGCCGCCGCCCAACTCCATGGGCCTGTCCAACATGTCGTCCAACGGCTCCGGGCTGCAGT
CGCACCTCTATCAGCCCACGTTCCCCGGCATGGTGCCCGCGTCCCTTTCCGGCCCGACCAACGTGACCGGCTCGCCTCAG
CTGTGTAGCTCCCCGGACAGTGACGTCTGGAGAGGGACGAGCATCGCGTCGCTGCGCCGCAAAGCGCTGGAGCACACAGT
CTCCATGAGTTTCACTTAGTGGCGGCT
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by Elisavet Kaitetzidou
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