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Otp (Orthopedia homeobox)

Organism
Astatotilapia burtoni (Astatotilapia burtoni )
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005179427.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005179511.1) annotated using gene prediction method: Gnomon.
Sequence >XM_005919112.2 Astatotilapia burtoni (Haplochromis burtoni) otpa
CCTTTTTAACCACAAACCGAATTTTCGTTCATTTAGACCATATATACTTTTTAAATTGACCCAAAGTTGTAGGATTTTTT
TTGGAGCGCATTTCGCCCTGGAGCGGTACGCGATGCTCTCTCATGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCA
TCACTAAACTCCGGCCCTAAACTCCAGTGGATGAAGGATGCTGCAGACTTACTCGGACACCGAGAAGCTCTCAAATGCCG
GCTGGGAGGTGGAGTTCCAGACCAGGGGCATCCGGGAGACATGCCTCCTGGTTCAGACTCTGTTGAAGGAACCACTCTCC
TGCCGGGTGAAGACATCGCCACTGTAGGATCCAACTCTGCGGGCATGCCGGTGAACGGGAAGGAGCAGGAGAAGCAGCAG
CAACAGCCGCAGCAGAACTCCGGCCAGACCACAAGCCAGCAGAAGCAGAAGCGGCACAGGACGCGTTTCACACCGGCGCA
GCTCAATGAGCTGGAGCGAAGCTTCGCCAAAACCCACTACCCTGATATCTTCATGAGGGAGGAACTGGCGCTAAGGATCG
GCCTCACCGAGTCCAGAGTTCAGGTTTGGTTCCAGAATAGACGCGCTAAGTGGAAGAAAAGGAAGAAGACCACTAATGTT
TTCCGTGCACCGGGTACCCTGCTCCCAACACCGGGCCTGCCACAGTTTTCTGCCGCTGCCGCCATGGAGAACAGCCTGTG
CTCCTTCCACGCCAACGACTCTCGCTGGGCTACGGGGATGCCGGGGGTCTCCCAGCTGCAGCTCCCCCCCGCTCTGGGTC
GCCAGCCAGGCATGGCGCAGTCACTGTCACAGTGCAGCCTTGGTCCAGGCCCGCCACCAAACTCCATGGGTCTCTCTAAC
GGCCTGTCCTCCAACGGCTCCGGTCTGCAGTCCCACCTCTACCAGACGCCTTTTCCAGGAATGTCGGCCTCCCTCTCCGG
CCCCACGAACGTATCGGGCTCCCCACAGCTGTGTAGCTCCCCGGACAGTGACATGTGGAGAGGAACGAGCATCGCGTCTC
TGAGGCGCAAAGCGCTGGAGCACACAGTGTCCATGAGTTTCACTTAGTGACTTTTGACCACACCGCACCCTATTCCACCA
AACACCCCTCTCCCAGCCCCGCCTGGCTCCTTCTTTTTTCCTGTTTTTAATCCAGCTATTTAGATCAAAATGAGAGAACG
AATGAAGTAATCAGGCCTTAAATGTGAGGAGAGAAAAAAAGAGGTAAATGCCACCTCATAAAGACCAAATAATGATAATA
ACAAAAGGACAACATTTATTGACAAACGGAAGAAAAAAAATGGGGTCATTTATCTCGTTAATTCAAACGGATTTTTTTCT
TACCAGCTATTGTTGATAAATACTATTGTAATGATCTTTAGACTATAGGCCCTAATTACCGAGAGCCAAACAATCGTCGT
ATTTACGTTGTCATTGAGCGTGTCTTTACGCACGTTATTGTGTTCAGGTGAGGTTGTGTTATGTCAAACGGTTATTTATA
AGATTGGGTATTTTGATAGCAGCCTGCCACACACGCACCAAACTGACAGTGAGCCTACTGAACTGGGTCTCGGGCATGCA
CTGTGCATGTGGATTTAATAATTAAAGGAGAAAACGGTGCCCACTCAGACTGAACAGGTGCTTTTGTTTGGTGACCTCAG
TCCCGTCTGCATGGGACGGGATCACACACACACACGGGCGATCTTTCAGTAGGCCTACTCTGTTTTAGGATGTTTTGTGT
AGATAAAACATTCTTGCTATGTACCCGCTGGTCTTTTTTGTGACATGTTTTAACTTATTGTATGTGATATTACTTGACAC
ATTTCTTAAATGTTTGATCTTACATCGAAATGCACCACATTGACGGGTTTGTACCAATTTAAAATGAGCAAACAAATAAA
AATAATTTTCAAGAA
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>XM_005929838.2 Astatotilapia burtoni (Haplochromis burtoni) otpb
ACTCTGATTGGTCCTCGTTTGGAGAAGCTCATGGGTTCATTCCGTTGTTAAGCGCCTCCCCATTTCGCTAAACTACATTA
TAATGCAACGAACCTCCCTTTTAACCACAAACCGAATTTGCTTTCATTTAGGCTATATATTTTTCTTAAATAGGTTAAAG
TCATAGAGATTTTTTTCTTTTTTTCGTTTCCTTTTTTTTTTTTTTGGGAATAGCATTTCGCCCTGGAGCGGTGCGCAATG
CTATCTCATGCCGACCTCCTGGATGCTCGCCTCGGTGAGTTAACATCACCAAACTCCGGTCTTCAACTCTACTGGATGAA
GGATGCCGCGGAGCTCCTGGGCCACAGGGAGGCTTTGAAATGCAGGCTCGGCGGTGGGGGACCTGACCCGGGACACTCCG
GGGAGCTCGGCCCGGGCCCGGACGGCGTGGAAGGGACTACGATGCTCCCGGGTGACGATATCACCAGCGGCGGGGGATCC
AACCCGGTGCAGGTGAACAGCAAAGAGCAGGACAAACAACAGCAGCAACAGCAGCAGAACAACAACAGCAACAACAACCC
CAACCAGTCTGGAGGGCAGCAGCCCCAGAAACAGAAGCGACACCGGACCCGCTTCACGCCGGCGCAGCTCAACGAGCTGG
AGAGGAGCTTCGCCAAAACACACTACCCTGACATCTTCATGCGGGAGGAACTGGCTCTGAGGATCGGCCTGACGGAGTCC
AGAGTGCAGGTCTGGTTCCAGAACCGACGGGCTAAGTGGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGGGCTCCGGG
GACTCTGCTGCCGACGCACCACGGTTTGCCTCAGTTCCCATCCGCAGCTGCGGCAGCAGCGGCTATGGGCGACAGCCTCT
GCTCCTTCCACGCCAACGACACCCGCTGGGCCACGGCAGGTATGCCTGGCGTGTCTCAGCTGCAGCTCCCGCCCGCTCTT
GGCCGCCAGCAGGCCATGGCGCAGTCCCTGTCTCAGTGCAGCCTTGGAGCCGGACCACCGCCCAACTCCATGGGTCTATC
CAACATGTCGTCGAACGGCTCCGGGCTGCAGTCGCACCTCTACCAGCCCACTTTCCCCGGAATGGTCCCCGCGTCTCTAT
CCGGCCCGACGAACGTGACCGGGTCGCCTCAGCTGTGTAGCTCCCCGGACAGTGACGTCTGGAGAGGGACAAGCATCGCC
TCTCTGCGCCGCAAAGCGCTGGAGCACACAGTATCCATGAGCTTCACCTAGTGACGACGGTCAGCGCTACGAGCTTTTCT
TTCACCAACTACAGAGATCTTGTGCATTTTGTTCTTACCCACCCAGTCCACCCAAAGAGGCACAGTGGGACAAATACACC
CGGGATATTTGTTCAGATAACATTTTTTCTTCTTCTTCTACCCAGTTCACGAGAAAGAGGGGGAGAACTGACATTATTCA
TTGGGCCCTTTGGCCTTTATTAACCATAGGACTGGTTCTGTTTTAGGCTATAATTTATTATTTCGCATGTAGCCTCGATC
AGCTATTTATTTCTCTATTTAAACGAACCGATGCGTGAGTTCGGTATTTATTCACTTATTTATTTATTTATTGGGCACAT
CCAGCCCTGGCCATGATTGCCGCGGGGCACTCGGTTATATTTGCTCGGTGACTGAAGGTTTTTGAAGACAAATTCTGTGG
ATACTTTTAACTACAAAAACTAGATCACAGATTCAATCTCCCCCTTCCCCCCCCCTCCTGCTGCACAGCATGCAACTCTA
TAAGACCAAAGGGATGCACACTGGCCACGCAAAAGCCACACACCTGGAGATTTAAAAGAAGGAAAACATGGATGATTCAC
CAGGAGGGAGACTGATTTGACAGGAACGGGGGTAAAAAAATAAAATAAATTAAAGACTTGACTGCATGTGCTGTCCAAAG
CAAAAATAAAAAGGGGGGAAATACTCTGAATTAAGACATTGAAAGTGACTTAACTATAATCTGTTATATAGGATGTTTTG
TGTAGCGGAAGCACTCTTGTTCCCATTTGGTCAGTTTGTGATAACTTATGTTTCCAAAATTATGTCTGTGCTTATTCTCA
GCTATGACTTTCTTAAATGTTTGAACCGTTTTGTTTCATGGACATGTTTATATCAATTCAGTGTAAATGATCAAATAAAA
ACCATTTTCAATTATGCCACAACACGAATCAACCCTCGTTTCTTTACAAGCTCAGTCCAAAAGGTATTTAGATTTTAAAT
GATTGTAGTGATGAATCTGAAATTTTTGTTTAGCGTTAACTGTATCAAATTCTCTATCTGGTATAAACTTATTTAAGTAA
AAAAAAAAAAAGAGGCAGCAATGAACATTGAAGTTAGGCTTAAGTAGCAAATAATTATTCTACAGAAAAGTAAGTTTGCG
TTATTTGTGATGCTGTTAACTTCTTTGCCTTACATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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