Home BLAST Help About  

Otp (Orthopedia homeobox)

Organism
Haplochromis nyererei (Nyereres Viktoriabuntbarsch)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005187514.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005187403.1) annotated using gene prediction method: Gnomon.
Sequence >XM_005741801.1 Pundamilia nyererei otpa
CCGAATTTTCGTTCATTTAGACCATATATACTTTTTAAATTGACCCAAAGTTGTAGGATTTTTTTTGGAGCGCATTTCGC
CCTGGAGCGGTACGCGATGCTCTCTCATGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCATCACTAAACTCCGGCC
CTAAACTCCAGTGGATGAAGGATGCTGCAGACTTACTCGGACACCGAGAAGCTCTCAAATGCCGGCTGGGAGGTGGAGTT
CCAGACCAGGGGCATCCGGGAGACATGCCTCCTGGTTCAGACTCTGTTGAAGGAACCACTCTCCTGCCGGGTGAAGACAT
CGCCACTGTAGGATCCAACTCTGCGGGCATGCCGGTGAACGGGAAGGAGCAGGAGAAGCAGCAGCAACAGCCGCAGCAGA
ACTCCGGCCAGACCACAAGCCAGCAGAAGCAGAAGCGGCACAGGACGCGTTTCACACCGGCGCAGCTCAATGAGCTGGAG
CGAAGCTTCGCCAAAACCCACTACCCTGATATCTTCATGAGGGAGGAACTGGCGCTAAGAATCGGCCTCACCGAGTCCAG
AGTTCAGGTTTGGTTCCAGAATAGACGCGCTAAGTGGAAGAAAAGGAAGAAGACCACTAATGTTTTCCGTGCACCGGGTA
CCCTGCTCCCAACACCGGGCCTGCCACAGTTTTCTGCCGCTGCCGCCATGGAGAACAGCCTGTGCTCCTTCCACGCCAAC
GACTCTCGCTGGGCTACGGGGATGCCGGGGGTCTCCCAGCTGCAGCTCCCCCCCGCTCTGGGTCGCCAGCCAGGCATGGC
GCAGTCACTGTCACAGTGCAGCCTTGGTCCAGGCCCGCCACCAAACTCCATGGGTCTCTCTAACGGCCTGTCCTCCAACG
GCTCCGGTCTGCAGTCCCACCTCTACCAGACGCCTTTTCCAGGAATGTCGGCCTCCCTCTCCGGCCCTACGAACGTATCG
GGCTCCCCACAGCTGTGTAGCTCCCCGGACAGTGACATGTGGAGAGGAACGAGCATCGCGTCTCTGAGGCGCAAAGCGCT
GGAGCACACAGTGTCCATGAGTTTCACTTAGTGACTTTTGACCACACCGCACCCTATTCCATCAAACACCCCTCTCCCAG
CCCCGCCTGGCTCCTTCTTTTTTCCTGTTTTTAATCCAGCTATTTAGATCAAAATGAGAGAACGAATGAAGTAATCAGGC
CTTAAATGTGAGGAGAGAAAAAAAAGAGGTAAATGCCACCTCATAAAGACCAAATAATGATAATAACAAAAGGACAACAT
TTATTGACAAACGGAAGAAAAAAAATGGGGTCATTTATCTCGTTAATTCAAACGGATTTTTTTCTTACCAGCTATTGTTG
ATAAATACTATTGTAATGATCTTTAGACTATAGGCCCTAATTACCGAGAGCCAAACAATCGTCGTATTTACGTTGTCATT
GAGCGTGTCTTTACGCACGTTATTGTGTTCAGGTGAGGTTGTGTTATGTCAAACGGTTATTTATAAGATTGGGTATTTTG
ATAGCAGCCTGCCACACACGCACCAAACTGACAGTGAGCCTACTGAACTGGGTCTCGGGCATGCACTGTGCATGTGGATT
TAATAATTAAAGGAGAAAACGGTGCCCACTCAGACTGAACAGGTGCTTTTGTTTGGTGACCTCAGTCCCGTCTGCATGGG
ACGGGATCACACACACACACTGGCGATCTTTCAGTAGGCCTACTCTGTTTTAGGATGTTTTGTGTAGATAAAACATTCTT
GCTATGTACCCGCTGGTCTTTTTTGTGACATGTTTTAACTTATTGTATGTGATATTACTTGACACATTTCTTAAATGTTT
GATCTTACATCGAAATGCACCACATTGACGGGTTTGTACCAATTTAAAATGAGCAAACAAATAAAAATAATTTTCAA
Send to
or

>XM_005720103.2 Pundamilia nyererei otpb
CGCCCTGGAGCGGTGCGCAATGCTATCTCATGCCGACCTCCTGGATGCTCGCCTCGGTGAGTTAACATCACCAAACTCCG
GTCTTCAACTCTACTGGATGAAGGATGCCGCGGAGCTCCTGGGCCACAGGGAGGCTTTGAAATGCAGGCTCGGCGGTGGG
GGACCTGACCCGGGACACTCCGGGGAGCTCGGCCCGGGCCCGGACGGCGTGGAAGGGACTACGATGCTCCCGGGTGACGA
TATCACCAGCGGCGGGGGATCCAACCCGGTGCAGGTGAACAGCAAAGAGCAGGACAAACAACAGCAGCAACAACAGCAGA
ACAACAACAACAGCAACAACAACCCCAACCAGTCTGGAGGGCAGCAGCCCCAGAAACAGAAGCGACACCGGACCCGCTTC
ACGCCGGCGCAGCTCAACGAGCTGGAGAGGAGCTTCGCCAAAACACACTACCCTGACATCTTCATGCGGGAGGAACTGGC
TCTGAGGATCGGCCTGACGGAGTCCAGAGTGCAGGTCTGGTTCCAGAACCGACGGGCTAAGTGGAAGAAGCGCAAGAAGA
CCACCAACGTGTTCCGGGCTCCGGGGACTCTGCTGCCGACGCACCACGGTTTGCCTCAGTTCCCATCCGCAGCTGCGGCA
GCAGCGGCTATGGGCGACAGCCTCTGCTCCTTCCACGCCAACGACACCCGCTGGGCCACGGCAGGTATGCCTGGCGTGTC
TCAGCTGCAGCTCCCGCCCGCTCTGGGCCGCCAGCAGGCCATGGCGCAGTCCCTGTCTCAGTGCAGCCTTGGAGCCGGAC
CACCGCCCAACTCCATGGGTCTATCCAACATGTCGTCGAACGGCTCCGGGCTGCAGTCGCACCTCTACCAGCCCACTTTC
CCCGGAATGGTCCCCGCGTCTCTATCCGGCCCGACGAACGTGACCGGGTCACCTCAGCTGTGTAGCTCCCCGGACAGTGA
CGTCTGGAGAGGGACAAGCATCGCCTCTCTGCGCCGCAAAGCGCTGGAGCACACAGTATCCATGAGCTTCACCTAGTGAC
GACGGTCAGCGCTACGAGCTTTTCTTTCACCAACTACAGAGATCTTGTGCATTTTGTTCTTACCCACCCAGTCCACCCAA
AGAGGCACAGTGGGACAAATACACCCGGGATATTTGTTCAGATAACATTTTTTCTTCTTCTTCTACCCAGTTCACGAGAA
AGAGGGGGAGAACTGACATTATTCATTGGGCCCTTTGGCCTTTATTAACCATAGGACTGGTTCTGTTTTAGGCTATAATT
TATTATTTCGCATGTAGCCTCGATCAGCTATTTATTTCTCTATTTAAACGAACCGATGCGTGAGTTCGGTATTTATTCAC
TTATTTATTTATTTATTGGGCACATCCAGCCCTGGCCATGATTGCCGCGGGGCACTCGGTTATATTTGCTCGGTGACTGA
AGGTTTTTGAAGACAAATTCTGTGGATACTTTTAACTACAAAAACTAGATCACAGATTCAATCTCCCCCTTTCCCCCCCT
CCTGCTGCACAGCATGCAACTCTATAAGACCAAAGGGATGCACACTGGCTACGCAAAAGCCACACACCTGGAGATTTAAA
AGAAGGAAAACATGGACGATTCACCAGGAGGGAGACTGATTTGACAGGAACGGGGGTAAAAAAATTAATTAATTAAAGAC
TTGACTGCATGTGCTGTCCAAAGCAAAAATAAAAAGGGGGGAAATACTCTGAATTAAGACATTGAAAGTGACTTAACTAT
AATCTGTTATATAGGATGTTTTGTGTAGCGGAAGCA
Send to
or



Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by Elisavet Kaitetzidou
CLICK IMAGES
FOR LARGER SIZE