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Otp (Orthopedia homeobox)

Organism
Neolamprologus brichardi (Neolamprologus brichardi )
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006272017.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006272130.1) annotated using gene prediction method: Gnomon.
Sequence >XM_006789899.1 Neolamprologus brichardi otpa
TTAGACCATATATACTTTTTAAATTGACCCAAAGTTGTAGGATTTTTTTTGGAGCGCATTTCGCCCTGGAGCGGTACGCG
ATGCTCTCTCATGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCATCACTAAACTCCGGCCCTAAACTCCAGTGGAT
GAAGGATGCTGCAGACTTACTCGGACACCGAGAAGCTCTCAAATGCCGGCTGGGAGGTGGAGTTCCAGACCAGGGGCATC
CGGGAGACATGCCTCCTGGTTCAGACTCTGTTGAAGGAACCACTCTCCTGCCGGGAGAAGACATCGCCACTGTAGGATCC
AACTCTGCGGGCATGCCGGTGAACGGGAAGGAGCAGGAGAAGCAGCAGCAACAGCCGCAGCAGAACTCCGGCCAGACCAC
AAGCCAGCAGAAGCAGAAGCGGCACAGGACGCGTTTCACACCGGCGCAGCTCAATGAGCTGGAGCGAAGCTTCGCCAAAA
CCCACTACCCTGATATCTTCATGAGGGAGGAACTGGCGCTAAGGATCGGCCTCACCGAGTCCAGAGTTCAGGTTTGGTTC
CAGAATAGACGCGCTAAGTGGAAGAAAAGGAAGAAGACCACTAATGTTTTCCGTGCACCGGGTACCCTGCTCCCAACACC
GGGCCTGCCACAGTTTTCTGCCGCTGCCGCCATGGAGAACAGCCTGTGCTCCTTCCACGCCAACGACTCTCGCTGGGCTA
CGGGGATGCCGGGGGTCTCCCAGCTGCAGCTCCCCCCCGCTCTGGGTCGCCAGCCAGGCATGGCGCAGTCACTGTCACAG
TGCAGCCTTGGTCCAGGCCCGCCACCAAACTCCATGGGTCTCTCTAACGGCCTGTCCTCCAACGGCTCCGGTCTGCAGTC
CCACCTCTACCAGACGCCTTTTCCAGGAATGTCGGCCTCCCTCTCCGGCCCCACGAACGTATCGGGCTCCCCACAGCTGT
GTAGCTCCCCGGACAGTGACATGTGGAGAGGAACGAGCATCGCATCTCTGAGGCGCAAAGCGCTGGAGCACACAGTGTCC
ATGAGTTTCACTTAGTGACTTTTGACCACACCGCACCCTATTCCACCAAACACCCCTCTCCCAGCCCCGCCTGGCTCCTT
CTTTTTTCCTGTTTTTAATCCAGCTATTTAGATCAAAATGAGAGAACGAATGAAGTAATCAGGCCTTAAATGTGAGGAGA
AAAAAAAGAGGTAAATGCCACCTCATAAAGACCAAATAATGATAATAACAAAAGGACAACATTTATTGACAAACGGAAGA
AAAAAATAGGGTTATTTATCTCGTTAATTCAAACGGATTTTTTTCTTACCAGCTATTGTTGATAAATACTATTGTAATGA
TCTTTAGACTATAGGCCCTAATTACCGAGAGCCAAACAATCGTCGTATTTACGTTGTCATTGAGCGTGTCTTTACGCACG
TTATTGTGTTCAGGTGAGGTTGTGTTATGTCAAACGGTTATTTATAAGATTGGGTATTTTGATAGCAGCCTGCCACACAC
GCACCAAACTGACAGTGAGCCTACTGAACTGGGTCTCGGGCATGCACTGTGCATGTGGATTTAATAATTAAAGGAGAAAA
CGGTGCCCACTCAGACTGAACAGGTGCTTTTGTTTGGTGACCTCAGTCTCGTCTGCATGGGACGGGATCACACACACACA
CGGGGGATCTTTCAGTAGGCCTACTCTGTTTTAGGATGTTTTGTGTAGATAAAACATTCTTGCTATGTACCCGCTGGTCT
TTTTTGTGACATGTTTTAACTTATTGTATGTGATATTACTTGACACATTTCTTAAATGTTTGATCTTACATCGAAATGCA
CCACATTGACGGGTTTGTACCAATTTAAAATGAGCAAACAAATAAAAATAATT
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>XM_006804757.1 Neolamprologus brichardi otpb
TTCTTTTTTTCGTTTCCTTTTTTTTTTTTTTGGGAATAGCATTTCGCCCTGGAGCGGTGCGCAATGCTATCTCATGCCGA
CCTCCTGGATGCTCGCCTCGGGATGAAGGATGCCGCGGCGGAGCTCCTGGGCCACAGGGAGGCTTTGAAATGCAGGCTCG
GCGGTGGGGGACCTGACCCGGGACACTCCGGGGAGCTCGGCCCGGGCCCGGACGGCGTGGAAGGGACTACGATGCTCCCG
GGTGACGATATCACCAGCGGCGGGGGATCCAACCCGGTGCAGGTGAACAGCAAAGAGCAGGACAAACAACAGCAGCAACA
GCAGCAGAACAACAACAGCAACAACAACCCCAACCAGTCTGGAGGGCAGCAGCCCCAGAAACAGAAGCGACACCGGACCC
GCTTCACGCCGGCGCAGCTCAACGAGCTGGAGAGGAGCTTCGCCAAAACACACTACCCTGACATCTTCATGCGGGAGGAA
CTGGCTCTGAGGATCGGCCTGACGGAGTCCAGAGTGCAGGTCTGGTTCCAGAACCGACGCGCTAAGTGGAAGAAGCGCAA
GAAGACCACCAACGTGTTCCGGGCTCCGGGGACTCTGCTGCCGACGCACCATGGTTTGCCTCAGTTCCCATCCGCAGCTG
CGGCAGCCGCGGCTATGGGCGACAGCCTCTGCTCCTTCCACGCCAACGACACCCGCTGGGCCACGGCAGGGATGCCTGGC
GTGTCTCAGCTGCAGCTCCCGCCCGCTCTGGGCCGCCAGCAGGCCATGGCGCAGTCCCTGTCTCAGTGCAGCCTTGGAGC
CGGACCACCGCCCAACTCCATGGGTCTATCCAACATGTCGTCGAACGGCTCTGGGCTGCAGTCGCACCTCTACCAGCCCA
CTTTCCCCGGAATGGTCCCCGCGTCTCTATCCGGCCCGACGAACGTGACCGGGTCGCCTCAGCTGTGTAGCTCCCCGGAC
AGTGACGTCTGGAGAGGGACAAGCATCGCCTCTCTGCGCCGCAAAGCGCTGGAGCACACAGTATCTATGAGCTTCACCTA
GTGACGACGGTCAGCGCTACGAGCTTTTCTTTCACCAACTACAGAGATCTTGTGCATTTTGTTCTTAGCCACCCAGTCCA
CCCAAAGAGGCACAGTGGGACAAATACATCCGGGATATTTGTTCAGATAACATTTTTTCTTCTTCTTCTACCCAGTTCAC
GAGAAAGAGGGGGAGAACTGACATTATTCATTGGGCCTTTTGGCCTTTATTAACCATAGGACTGGTTCTGTTTTAGGCTA
TAATTTATTATTTCGCATGTAGCCTCGATCAGCTATTTATTTCTCTATTTAAACGAACCGATGCGTGAGTTCGGTATTTA
TTCACTTATTTATTTATTTATTGGGCACATCCAGCCCTCGCCATGATTGCCGCGGGGCTCTCGGTGATATTTGCTCGGTG
ACTGAAGGTTTTTGAAGACAAATTCTGTGGATACTTTTAACCACAAAAACTAGATCACAGATTCAATCTCCCCCCTTTCC
CCCCTCCTGCTGCACAGCATGCAACTCTATAAGACCAAAGGGATGCATACTGGCCACGCAAAAGCCACACACCTGGAGAT
TTAAAAGAAGGAAAACATGGACGATTCACCAGGAGGGAGACTGATTTGACAGGAACGGGGGTAAAAAAAAAGTAAATAAA
TAAAAGACTTGACTGCATGTGCTGTCCAAAGCAAAAATAAAAAGGGGGGAAATACTCTGAATTAAGACATTGAAAGTGAC
TTAACTATAATCTGTTATATAGGATGTTTTGTGTAGCGGAAGCACTCTTGTTCCCATTTGGTCAGTTTGTGATAACTTAT
GTTTCCAAAATTATGTCTGTGCTTATTCTCAGCTATGACTTTCTTAAATGTTTGAACCGTTTTGTTTCATGGACATGTTT
ATATCAATTCAGTGTAAATGATCAAATAAAAACCATTTTCAATTATG
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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