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Otp (Orthopedia homeobox)

Organism
Oreochromis niloticus (Tilapia)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167474.2) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167548.1) annotated using gene prediction method: Gnomon, supported by EST evidence.
Sequence >XM_003451053.3 Oreochromis niloticus otpa
CTAATAAGCGCCTCCCCATCGCTCTAAAGGACATTATAATGCAAGGGACCTCCTTTTTAACCACAAACCGAATTTTCGTT
CATTTAGACCATATATACTTTTTAAATTGACCCAAAGTTGTAGGATTTTTTTGGAGCGCATTTCGCCCTGGAGCGGTACG
CGATGCTCTCTCATGCCGACCTCCTGGATGCTCGGCTCGGGATGAAGGATGCTGCAGACTTACTCGGACACCGAGAAGCT
CTCAAATGCCGGCTGGGAGGTGGAGTTCCAGACCAGGGGCATCCGGGAGACATGCCTCCTGGTTCAGACTCTGTTGAAGG
AACCACTCTCCTGCCGGGTGAAGACATCGCCACTGTAGGATCCAACTCTGCGGGCATGCCGGTGAACGGGAAGGAGCAGG
AGAAGCAGCAGCAACAGCCGCAGCAGAACTCCGGCCAGCCCACAAGTCAGCAGAAGCAGAAGCGGCACAGGACGCGTTTC
ACACCGGCGCAGCTCAATGAGCTGGAGCGAAGCTTCGCCAAAACCCACTACCCTGATATCTTCATGAGGGAGGAACTGGC
GCTAAGGATCGGCCTCACCGAGTCCAGAGTTCAGGTTTGGTTCCAGAATAGACGCGCTAAGTGGAAGAAAAGGAAGAAGA
CCACTAATGTTTTCCGTGCACCGGGTACGCTGCTCCCAACACCGGGCCTGCCACAGTTTTCTGCCGCTGCCGCCATGGAG
AATAGCCTGTGCTCCTTCCACGCCAACGACTCTCGCTGGGCTACGGGGATGCCAGGGGTCTCCCAGCTGCAGCTCCCCCC
CGCTCTGGGTCGCCAGCCAGGCATGGCGCAGTCACTGTCACAGTGCAGCCTTGGTCCAGGCCCGCCACCAAACTCCATGG
GTCTCTCTAACGGCCTGTCCTCCAACGGCTCCGGTCTGCAGTCCCACCTCTACCAGACGCCTTTTCCAGGAATGTCGGCC
TCCCTCTCCGGCCCCACGAACGTATCGGGCTCCCCACAGCTGTGTAGCTCCCCGGACAGTGACATGTGGAGAGGAACGAG
CATCGCGTCTCTGAGGCGCAAAGCGCTGGAGCACACAGTGTCCATGAGTTTCACTTAGTGACTTTTGACCACACCGCACC
CTATTCCACCAAACATCCCTCTCCCAGCCCCGCCTGGCTCCTTCTTTTTTCCTGTTTTTAATCCAGCTATTTAGATCAAA
ATGAGAGAACGAATAAAGTAATCAGGCCTGAAATGTGAGCGAAAAAAAGAGGTAAATGCCACCTCATAAAGACCAAATAA
TGATAATAACAAAAGGACAACATTTATTGACAAACGGAAGAAAAAAAATGGGGTTATTTATCTCGTTAATTCAAACGGAT
TTTTTTCTTACCAGCTATTGTTGATAAATACTATTGTAATGATCTTTAGACTATAGGCCCTAATTACCGAGAGCCAAACA
ATCGTCGTATTTACGTTGTCATTGAGCGTGTCTTTACGCACGTTATTGTGTTCAGGTGAGGTTGTGTTATGTCAAACGGT
TATTTATAAGATTGGGTATTTTGATAGCAGCCTGCCACACACGCACCAAACTGACAGTGAGCCTACTGAACTGGGTCTCG
GGCATGCACTGTGCATGTGGATTTAATAATTAAAGGAGAAAACGGTGCCCACTCAGACTGAACAGGTGCTTTTGTTTGGT
GACCTCAGTCTCGTCTGCATGGGACGGGATCACGCACACACACGGGCGATCTTTCAGTAGGCCTACTCTGTTTTAGGATG
TTTTGTGTAGATAAAACATTCTTGCTATGTACCCGCTGGTCTTTTTTGTGACATGTTTTAACTTATTGTATGTGATATTA
CTTGACACATTTCTTAAATGTTTGATCTTACATCGAAATGCACCACATTGACGGGTTTGTACCAATTTAAAATGAGCAAA
CAAATAAAAATAATTTTCAAGAAT
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>XM_005459701.2 Oreochromis niloticus otpa
GCGTTTAAAGCATGCACGACGACTGCTTCATCTTCTACTGCAGCCAAAACAATGCTTCAGCGGCTCCTAAATCCGCCTTT
TCGCATGGATGAAGGATGCCGCGGCGGAGCTCCTGGGCCACAGGGAGGCTTTGAAATGCAGGCTCGGCGGTGGAGGACCT
GACCCGGGACACTCCGGGGAGCTCGGCCCGGGCCCGGACGGCGTAGAAGGGACTACGATGCTCCCGGGTGACGATATCAC
CAGCGGCGGGGGATCCAACCCGGTGCAGGTGAACAGCAAAGAGCAGGAGAAACAACAGCAGCAACAGCAGCAGAACAACA
ACAGCAACAACAACCCCAACCAGTCTGGAGGGCAGCAGCCCCAGAAACAGAAGCGACACCGGACCCGCTTTACGCCGGCG
CAGCTCAACGAGCTGGAGAGGAGCTTCGCCAAAACGCACTACCCTGACATCTTCATGCGGGAGGAGCTGGCTCTGAGGAT
CGGCCTGACGGAGTCCAGAGTGCAGGTCTGGTTCCAGAACCGACGCGCTAAGTGGAAGAAGCGCAAGAAGACCACCAACG
TGTTCCGGGCTCCGGGGACTCTGCTGCCGACGCACCACGGTCTGCCTCAGTTCCCATCCGCAGCTGCGGCAGCAGCGGCT
ATGGGCGACAGCCTCTGCTCCTTCCACGCCAACGACACCCGCTGGGCCACGGCAGGGATGCCCGGCGTGTCTCAGCTGCA
GCTCCCGCCCGCTCTGGGCCGCCAGCAGGCCATGGCGCAGTCGCTGTCTCAGTGCAGCCTTGGAGCCGGACCACCACCCA
ACTCCATGGGTCTATCCAACATGTCGTCGAACGGCTCCGGGCTGCAGTCACACCTCTACCAGCCCACTTTCCCCGGAATG
GTCCCCGCGTCTCTATCCGGCCCGACGAACGTGACCGGGTCGCCTCAGCTGTGTAGCTCCCCGGACAGTGACGTCTGGAG
AGGGACAAGCATCGCCTCTCTGCGCCGCAAAGCGCTGGAGCACACAGTATCCATGAGCTTCACCTAGTGACGAGGGTCAG
CGCTACGAGCTTTTCTTTCACCAACACAGAGATCTTGTGCATTTTGTTCTTACCCACCTAGTCCATCCAAAGAGGCACAG
TGGGACAAATACACCCGGGATATTTGTTCAGATAACATTTTTTCTTCTTCTTCTACCCAATTCACGAGAAAAACGGGGAG
AACTGACATTATTCATTGGGCCCTTTGGCCTTTATTAACCATAGGACTGGTTCTGTTTTAGGCTATAATTTATTATTTCG
CATGTAGCCTCGATCAGCTATTTATTTCTCTATTTAAACGAACCGATGCGTGAGTTCGGTATTTATTCACTTATTTATTT
ATTTATTTATTGGGCACATCCAGCCTTCGCCATGATTGCCGCGGGGCTCTCGGTGATATTTGCTCGGTGACTGAGGGTTT
TTGAAGACAAATTCTGTGGATACTTTTAACTACAAAAACTAGATCACAGATTCACTCTCCCCCCCCTTTTCCCCCCTCCT
GCTGCACAGCATGCAACTCTATAAGACCAAAGGGATGCACACTGGCCACGCAAAAGCCACACACCTGGAGATTTAAAAGA
AGGAAAACATGGACGATTCACCAGGAGGGAGACCGATTTGACAGGAACGGGGGTAAAAAAATAAATAAATAAAAGACTTG
ACTGCATGTGCCGTCCAAAGCAAAAATAGAAAGGGGGGAAATACTCTGAATTAAGACATTGAAAGTGACTTAACTATAAT
CTGTTATATAGGATGTTTTGTGTAGCGGAAGCACTCTTGTTCCCATTTGGTCAGTTTGTGATAACTTATGTTTCCAAAAC
TATGTCTGTGCTTATTCTCAGCTATGACTTTCTTAAATGTTTGAACAGTTTTGTTTCATGGACATGTTTATATCAATTCA
GTGTAAATGATCAAATAAAAACCATTTTCAATT
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by Elisavet Kaitetzidou
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