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Otp (Orthopedia homeobox)

Organism
Maylandia zebra (Zebra mbuna)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014447505.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014445596.1) annotated using gene prediction method: Gnomon.
Sequence >XM_004547078.1 Maylandia zebra otpa
ACCATATATACTTTTTAAATTGACCCAAAGTTGTAGGATTTTTTTTGGAGCGCATTTCGCCCTGGAGCGGTACGCGATGC
TCTCTCATGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCATCACTAAACTCCGGCCCTAAACTCCAGTGGATGAAG
GATGCTGCAGACTTACTCGGACACCGAGAAGCTCTCAAATGCCGGCTGGGAGGTGGAGTTCCAGACCAGGGGCATCCGGG
AGACATGCCTCCTGGTTCAGACTCTGTTGAAGGAACCACTCTCCTGCCGGGTGAAGACATCGCCACTGTAGGATCCAACT
CTGCGGGCATGCCGGTGAACGGGAAGGAGCAGGAGAAGCAGCAGCAACAGCCGCAGCAGAACTCCGGCCAGACCACAAGC
CAGCAGAAGCAGAAGCGGCACAGGACGCGTTTCACACCGGCGCAGCTCAATGAGCTGGAGCGAAGCTTCGCCAAAACCCA
CTACCCTGATATCTTCATGAGGGAGGAACTGGCGCTAAGGATCGGCCTCACCGAGTCCAGAGTTCAGGTTTGGTTCCAGA
ATAGACGCGCTAAGTGGAAGAAAAGGAAGAAGACCACTAATGTTTTCCGTGCACCGGGTACCCTGCTCCCAACACCGGGC
CTGCCACAGTTTTCTGCCGCTGCCGCCATGGAGAACAGCCTGTGCTCCTTCCACGCCAACGACTCTCGCTGGGCTACGGG
GATGCCGGGGGTCTCCCAGCTGCAGCTCCCCCCCGCTCTGGGTCGCCAGCCAGGCATGGCGCAGTCACTGTCACAGTGCA
GCCTTGGTCCAGGCCCGCCACCAAACTCCATGGGTCTCTCTAACGGCCTGTCCTCCAACGGCTCCGGTCTGCAGTCCCAC
CTCTACCAGACGCCTTTTCCAGGAATGTCGGCCTCCCTCTCCGGCCCTACGAACGTATCGGGCTCCCCACAGCTGTGTAG
CTCCCCGGACAGTGACATGTGGAGAGGAACGAGCATCGCGTCTCTGAGGCGCAAAGCGCTGGAGCACACAGTGTCCATGA
GTTTCACTTAGTGACTTTTGACCACACCGCACCCTATTCCATCAAACACCCCTCTCCCAGCCCCGCCTGGCTCCTTCTTT
TTTCCTGTTTTTAATCCAGCTATTTAGATCAAAATGAGAGAACGAATGAAGTAATCAGGCCTTAAATGTGAGGAGAGAAA
AAAAGAGGTAAATGCCACCTCATAAAGACCAAATAATGATAATAACAAAAGGACAACATTTATTGACAAACGGAAGAAAA
AAAAATGGGGTCATTTATCTCGTTAATTCAAACGGATTTTTTTCTTACCAGCTATTGTTGATAAATACTATTGTAATGAT
CTTTAGACTATAGGCCGTAATTACCGAGAGCCAAACAATCGTCGTATTTACGTTGTCATTGAGCGTGTCTTTACGCACGT
TATTGTGTTCAGGTGAGGTTGTGTTATGTCAAACGGTTATTTATAAGATTGGGTATTTTGATAGCAGCCTGCCACACACA
CACGCACCAAACTGACAGTGAGCCTACTGAACTGGGTCTCGGGCATGCACTGTGCATGTGGATTTAATAATTAAAGGAGA
AAACGGTGCCCACTCAGACTGAACAGGTGCTTTTGTTTGGTGACCTCAGTCCCGTCTGCATGGGACGGGATCACACACAC
ACACGGGCGATCTTTCAGTAGGCCTACTCTGTTTTAGGATGTTTTGTGTAGATAAAACATTCTTGCTATGTACCCGCTGG
TCTTTTTTGTGACATGTTTTAACTTATTGTATGTGATATTACTTGACACATTTCTTAAATGTTTGATCTTACATCGAAAT
GCACCACATTGACGGGTTTGTACCAATTTAAAATGAGCAAACAAATAAAAATAATT
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>XM_004566861.1 Maylandia zebra otpb
TTTTCTTTTTTTCGTTTCCTTTTTTTTTTTTTTGGGAATAGCATTTCGCCCTGGAGCGGTGCGCAATGCTATCTCATGCC
GACCTCCTGGATGCTCGCCTCGGGATGAAGGATGCCGCGGAGCTCCTGGGCCACAGGGAGGCTTTGAAATGCAGGCTCGG
CGGTGGGGGACCTGACCCGGGACACTCCGGGGAGCTCGGCCCGGGCCCGGACGGCGTGGAAGGGACTACGATGCTCCCGG
GTGACGATATCACCAGCGGCGGGGGATCCAACCCGGTGCAGGTGAACAGCAAAGAGCAGGACAAACAACAGCAGCAACAG
CAGCAGAACAACAACAGCAACAACAACCCCAACCAGTCTGGAGGGCAGCAGCCCCAGAAACAGAAGCGACACCGGACCCG
CTTCACGCCGGCGCAGCTCAACGAGCTGGAGAGGAGCTTCGCCAAAACACACTACCCTGACATCTTCATGCGGGAGGAAC
TGGCTCTGAGGATCGGCCTGACGGAGTCCAGAGTGCAGGTCTGGTTCCAGAACCGACGGGCTAAGTGGAAGAAGCGCAAG
AAGACCACCAACGTGTTCCGGGCTCCGGGGACTCTGCTGCCGACGCACCACGGTTTGCCTCAGTTCCCATCCGCAGCTGC
GGCAGCAGCGGCTATGGGCGACAGCCTCTGCTCCTTCCACGCCAACGACACCCGCTGGGCCACGGCAGGTATGCCTGGCG
TGTCTCAGCTGCAGCTCCCGCCCGCTCTGGGCCGCCAGCAGGCCATGGCGCAGTCCCTGTCTCAGTGCAGCCTTGGAGCC
GGACCACCGCCCAACTCCATGGGTCTATCCAACATGTCGTCGAACGGCTCCGGGCTGCAGTCGCACCTCTACCAGCCCAC
TTTCCCCGGAATGGTCCCCGCGTCTCTATCTGGCCCGACGAACGTGACCGGGTCGCCTCAGCTGTGTAGCTCCCCGGACA
GTGACGTCTGGAGAGGGACAAGCATCGCCTCTCTGCGCCGCAAAGCGCTGGAGCACACAGTATCCATGAGCTTCACCTAG
TGACGACAGTCAGCGCAACGAGCTTTTCTTTCACCAACTACAGAGATCTTGTGCATTTTGTTCTTACCCACCCAGTCCAC
CCAAAGAGGCACAGTGGGACAAATACACCCGGGATATTTGTTCAGATAACATTTTTTCTTCTTCTTCTACCCAGTTCACG
AGAAAGAGGGGGAGAACTGACATTATTCATTGGGCCCTTTGGCCTTTATTAACCATAGGACTGGTTCTGTTTTAGGCTAT
AATTTATTATTTCGCATGTAGCCTCGATCAGCTATTTATTTCTCTATTTAAACGAACCGATGCGTGAGTTCGGTATTTAT
TCACTTATTTATTTATTTATTGGGCACATCCAGCCCTGGCCATGATTGCCGCGGGGCACTCGGTTATATTTGCTCGGTGA
CTGAAGGTTTTTGAAGACAAATTCTGTGGATACTTTTAACTACAAAAACTAGATCACAGATTCAATCTCCCCCTTTCCCC
CCCTCCTGCTGCACAGCATGCAACTCTATAAGACCAAAGGGATGCACACTGGCCACGCAAAAGCCACACACCTGGAGATT
TAAAAGAAGGAAAACATGGACGATTCACCAGGAGGGAGACTGATTTGACAGGAACGGGGGTAAAAAAATAAATAAATTAA
AGACTTGACTGCATGTGCTGTCCAAAGCAAAAATAAAAAGGGGGGAAATACTCTGAATTAAGACATTGAAAGTGACTTAA
CTATAATCTGTTATATAGGATGTTTTGTGTAGCGGAAGCACTCTTGTTCCCATTTGGTCAGTTTGTGATAACTTATGTTT
CCAAAATTATGTCTGTGCTTATTCTCAGCTATGACTTTCTTAAATGTTTGAACCGTTTTGTTTCATGGACATGTTTATAT
CAATTCAGTGTAAATGATCAAATAAAAACCATTTTCAA
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by Elisavet Kaitetzidou
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