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Otp (Orthopedia homeobox)

Organism
Xiphophorus maculatus (Platyfish)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005372180.1) annotated using gene prediction method: Gnomon.

otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005372256.1) annotated using gene prediction method: Gnomon.
Sequence >XM_005794943.1 Xiphophorus maculatus otpa
TCGGAGCGCCTTTCGCCCTGGAGCGATACGCGATGCTCTCTCACGCCGACCTCCTGGATGCTCGGCTCGGTGAGTTATCA
TCACTAAACTCCGGCCCGAAACTCCAGTGGATGAAGGATGCTGCGGAGCTCCTCGGGCATAGAGAAGCTCTCAAGTGCCG
ACTGGGGGGTGGGGTTCCGGACCAGGGGCATCCGGGAGACATGGCCCCTGGTTCGGACTCCGTAGAGGGAACCACTCTCC
TGCCGGGGGAAGATATCACCACCGTGGGGTCCAACTCTGCTGGCATGCCGGTGAACGGGAAACAGGAGCAGGAGAAGCAG
CAACAGCAGCAGCAGCAGCCACAGCAGAGCTCCGGTCAGTCCGCCAGCCAGCAGAAACAGAAGCGGCACAGGACGCGCTT
CACCCCGGCGCAACTCAACGAGCTGGAGCGCAGTTTCGCCAAGACCCATTACCCCGATATCTTTATGAGGGAGGAGCTGG
CGCTAAGGATCGGCCTCACCGAGTCCAGAGTTCAGGTTTGGTTCCAGAACAGACGCGCTAAGTGGAAGAAAAGAAAGAAG
ACCACCAACGTGTTCCGCGCCCCAGGGACTCTGCTCCCGACGCCTGGCCTGCCGCAGTTCTCCGCAGCGGCCGCAATGGA
GAACAGCCTGTGCTCGTTTCACGCCAACGACTCGCGCTGGGCCACCGGGATGCCCGGGGTCTCCCAGTTGCAGCTCCCGC
CGGCCCTGGGTCGTCAGCCGGGCATGGCGCAGTCCCTCTCGCAGTGCAGCCTGGGTCCCGGTCCGCCGCCAAACTCAATG
GGTCTCTCTAACGGCCTGTCCTCCAACGGCTCCGGCCTGCAGTCCCACCTCTACCAGTCGCCTTTCCCTGGAATGTCGGC
GTCCCTCTCCGGCCCCACGAACGTATCGGGCTCCCCGCAGCTGTGTAGCTCCCCGGACAGTGATATGTGGAGAGGGACAA
GCATCGCGTCACTTAGGCGCAAAGCGCTGGAGCACACAGTGTCAATGAGTTTCACTTAGTGACTTTTCAGCTCACCTCAT
CCTGCTCCTCCCGGCTTCT
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>XM_005802444.1 Xiphophorus maculatus otpb
ATGCTTTCTCACGCCGACCTCCTGGATGCTCGCCTCGGGATGAAGGATGCGGCGGCGGAGCTCCTGGGCCACAGGGAAGC
TCTGAAGTGCAGGCTCGGGGGCGGCGGACCTGACCCGGGACACTCCGGGGAGCTGGGTCCGGACGGCGTGGAAGGAGCCA
CGATGCTCCCCGGTGACGACATCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTCCAACCCGGTGCAGGTGAACAGC
AAGGAGCAGGAGAAGCAGCAGCAGCAGCAGCAGCAGAACAACAACAACAGCAGCGGAAACAACCCGAACCAGTCCGGAGG
GCAGCAGAGCCAGAAGCAGAAGCGGCACCGGACCCGCTTCACCCCGGCGCAGCTCAACGAGCTGGAGCGCAGCTTCGCCA
AGACGCACTACCCGGACATCTTCATGCGGGAGGAGCTGGCACTGCGGATCGGCCTGACGGAGTCCAGAGTTCAGGTCTGG
TTCCAGAACAGACGCGCCAAGTGGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGAGCGCCGGGGACGCTGCTGCCCAC
GCACCACGGCCTGCCCCAGTTCCCGTCGGCGGCGGCCGCGGCGGCGGCCATGGGCGACAGCCTCTGCTCCTTCCACGCCA
ACGACACCCGCTGGGCCACGGCGGGGATGCCCGGCGTGTCTCAGCTGCAGCTGCCGCCCGCCCTGGGCCGCCAGCAGGCC
ATGGCGCAGTCCCTGTCCCAGTGCAGCCTCGGCGCGGGGCCGCCGCCCAACTCCATGGGTCTGTCCAACATGTCGTCCAA
CGGGTCCGGGCTGCAGTCGCACCTGTACCAGCCCACGTTTCCCGGGATGGTCCCGGCGTCTCTTTCCGGCCCCACCAACG
TGGCCGGCTCGCCTCAGCTGTGTAGCTCCCCGGACAGTGACGTCTGGAGAGGGACGAGCATCGCGTCGCTGCGTCGCAAG
GCGCTGGAGCACACAGTCTCCATGAGCTTCACTTAGTGCCGAAGAGATTTTTCTTTCTGCATTTAGGTCTCTTGCATTCA
AAACAACAAAGAAAACAACAACAACAACAACAACAAAACAAAACCAGGATACTTGTGAATCTGCAGGCACCTGACTCTTT
TTTTCCCCCCTCCACAAATATGAGGAGAAGAGACTCTCTCCATCAGGCCTGCTGGCCTCTTATCAACCACAGGGCTGGTT
CCGGTCAAAGCTATAAGTTATTATTTCGCATGTGGCCTCTCTGTCTATTTATTTGTCTATTTAAATTAACTTATTGGTTC
GCTCGGTATTTATTTGGTTCTCGGTGACACTCGTGTCTGTTTCTGAGGACGCACATTCTGGAGACGCTTCAGAGCACAGC
AAGGTTGCAGATTTCCACTTTTCCTCCTGCCGCCAAAGGGCCAAAGGGTTTCACACTGGAAGTGCCAAAGCAAAAAAAGT
AAAAAAATAAAATAATAAAAATAAATAAATAAATAATAAAATACATAATAAAAATGTGCTTGGAGGTGTCAAAGACTGGC
AACTGAAATTCGTCGCCTACCATCGGAGAGAGAAAGACGATCTCAATCTAACAGGAATCAGGACAATCTGGATGATGACT
TGACTGCATGTGCTGTCAAAAGCAAAATATGGTGATGATAACAATAATGATGAGTAAAGAAAATACAACAAAAAAAAGGG
GGATACTCTAAAGTAAGACATGGAAGCTGATTTAACTGTAACCTGTTCTATAGGATGTTTTTGTGTAGCGGAAAA
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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