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FABP2 or IFABP (Fatty acid binding protein 2 or Intestinal fatty acid binding protein)

Organism
Salmo salar (Atlantic salmon)
GO term(s)
Molecular Function: GO: 0005215, GO: 0008289
Biological Process: GO: 0006810
Phylogeny
Paralogs
fabp2a1,
JK990979.1
fabp2a2,
JK990971.1
Citations
  • Lai,Y.Y.Y., Lubieniecki,K.P., Phillips,R.B., Chow, W., Koop,B.F., Davidson,W.S. (2009) Genomic organization of Atlantic salmon (Salmo salar) fatty acid binding protein (fabp2) genes reveals independent loss of duplicate loci in teleosts. Marine Genomics, 2 (3-4): 193-200.
  • Venold,F.F., Penn,M.H., Thorsen,J., Gu,J., Kortner,T.M., Krogdahl,A. and Bakke,A.M. (2013). Intestinal fatty acid binding protein (fabp2) in Atlantic salmon (Salmo salar): Localization and alteration of expression during development of diet induced enteritis. Comparative Biochemistry and Physiology, Part A: Molecular Integrative Physiology, 164(1): 229-240.
    • Sequence >JK990979 Salmo salar fabp2a1
    GACTCCTTAGAGTAGAGCCAGTCCAACCCTTCCAGCAACCATGACCTACAATGGCACTTGGAAAGTAGACCACAGTGAGA
    ACTATGAGAAATTCATGGAGCAAATGGGTGTCAACATGGTCAAGAGGAAGCTGGCTACTCACGATAACCTCAAGATCACC
    CTTGAACAAACTGGAGACAAGTTTGTCGTGAAGGAGGCCAGTACTTTCCGCACGCTGGATATGGAATTTACCCTGGGAGT
    CACCTTTGAGTATGCCCTTGCAGATGGGACAATGCTATCAGGTTCATGGGGCATGGAAGGAGACATGATGAAAGGTACAT
    TCACCAGAAAGGACAATGGAAAGGTGCTGACAACTACCAGAGCCATTGTTGGAGATGAACTTGTACAGAGCTACAGCTAC
    GATGGAGTCGAAGCCAAGAGAATTTTCAAGAGGGGTTAGAGGAAACCGATCAACCAATCCAACCACTAAGACCAAGAGGC
    GTTACCTTTGAATCCAGAATGATACCATTGTGACACTGAACATTTTACAACCTTCCCTAAGCCATTGGACCACTTCAGGT
    CTTTGTGACG
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    		or

    >JK990971 Salmo salar fabp2a2
    GACTCCTTAGAGTAGAGCCAGTCCAACCCTTTCAGCAACCATGACCTACAACGGCACTTGGAAAGTAGACCGCAGCGAGA
    ACTATGAGAAATTCATGGAGCAGATGGGTGTCAACATGGTCAAGAGGAAGCTGGCCGCTCACGATAACCTCAAGATCACC
    CTTGAACAAACTGGAGACAAATTTGTCGTGAAGGAGGCCAGTTCTTTCCGCACGCTGGATATGGAATTTACCCTGGGAGT
    CACCTTTGAATATGCTCTTGCAGATGGGACAATGCTATCAGGTTCATGGGGCATGGAAGGAGACATGATGAAAGGTACAT
    TCACCAGAAAGGACAATGGAAAGGTGCTGAAAACTACCAGAGCCATTGTTGGAGAGGAACTTGTACAGAGCTACAGCTAT
    GATGGAGTCGAAGCCAAGAGAATTTTCAAGAGGGGTTAGAGGAAACCGATCAAACAATCCAACCACTAAGACCAAGAAGA
    GCTACGTTCAAATCCAGAATTATACCATTTTACAACCTTAAGCCTTAAGCCACTGGACCACTTTAGGTCT
    Send to
    		or

    >DY691515 Salmo salar fabp2b
    GCACGAGGTGCTCACCGTAGACATGGCATTCAACGGTACCTGGAAAGTTGAACGCAACGAGAACTATGACAAGTTCATGG
    AGCAGATGGGCATCAATGTGATGAAGAGGAAGTTAGCTGAACATGACAACCTCAAGGTTATCATCGAGCAGACAGGAGAC
    AAGTTCCACATCAAGGAATCCAGCACCTTCCGTAACAAAGACATCGACTTCACCCTGGGCGTACAGTTTGACTATGCACT
    GGCCGACGGCACCGAAGTCTCAGGTGCCTGGGAGATGGATGGAGATGTGTTGAAGGGTAAATTCACCAGGAAAGACAACA
    GTAAGGTGCTGACCACCACTCGGGCCCTGGTGGGAGGAGAGCTAGTACAGAGCTATAACTACGATGGAGTGGATGCCAAG
    AGGATTTTCAAGAAGGCTTAAAGGGATTCATGATGAATTTCTATCTCACATACCATTACGTTTTTTCTAACCTTAAGAAT
    ATGTGGCAAGACTTTGGCTCAGGTGCCAAATTTAAAGTATAAGTCAAAATTTGCAGTGCCTTCCCCTCATTCTCTAAACC
    CCATGTACCCCCAAA
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    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by Elisavet Kaitetzidou
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