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THRa (Thyroid Hormone Receptor alpha)

Organism
Takifugu rubripes (Pufferfish)
GO term(s)
Molecular Function: GO: 0003677, GO:0003700, GO: 0003707
Cellular Component: GO: 0005634
Biological Process: GO: 0006355
Genomic Map Locations
thraa
Chr 5

thrab
Chr 1
Paralogs
Sequencing Methods
thraa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004070952.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence.

thrab: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004070897.1) annotated using gene prediction method: Gnomon.
Citations
  • Marchand,O., Safi,R., Escriva,H., Van Rompaey,E., Prunet,P. and Laudet,V. (2001). Molecular cloning and characterization of thyroid hormone receptors in teleost fish. Journal of Molecular Endocrinology, 26 (1), 51-65.
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    Sequence >XM_003964390.2 Takifugu rubripes thraa
    GCCCCCGTGCGATCGCTAGAGGGCGCTGTTTCACTTCCGAATGAATAACCCCCACTCGGAGGCTCTTCTTCCACTGACCC
    GCATTCACCCTGTACGACACAACCAGGAGGGGGGAGGACCGCGCACAGAGAGCAAATAAACGCCGTGGAGCTCCGCTTGC
    CGTGAATTCTGCCCGTCCTGGGAAGATCCAGCGCTCCCGTCTCCACGCCTCTCTTGAGGCGGCTACCTACGGGGGGCAGC
    TATCAGCGATGTCGTAGAGAAGGCTATCAACCGGACTCGCCTGCGTGTTGTTTGCTTTATTTTCCACCCCCTTCCTGACT
    TCCTAGCCTTGACACCGGGCTAGATGTTGACGGCGCGGGAGGTGGCTTTGTACAAGTCGAGCATCGGTGGAGACCCAATG
    CATGTTAAGAAGAACCGAATCAAGCCAGATGCAGCGCAGTTTGACCTCCAGCCGCCATCGCCCCTCCCTTGTTTCAGGCC
    AACCTCATCTGCTTTCCGCCTCCTGGAGACCTACAGGATGGTTTAGTGTCTGATTCTGCTTCCTCTGTTACCTCAGGGAT
    TTTTCTCCCACTGCCTACCTCCTCCACCAGATCAGCCAAGCGGATCAAGAAGCTACCTGTGACCTCACGCTCTCCTCACC
    AGTGACAACCTCCATGCCTCTTAAAGCTCACCTCGGTGCAAAAGTAATGAGCAGCAGTGACCTCGGTCTTCTCGCCGCCT
    GCCAGCTCATGCCCACCCAAAGCCTAGATCGTAACGATCCATCATTAGAAGACACAGCATAGTTAGCTCAGCGGCCACGC
    GCTCATAATAGCCTCACGTCTCGACCAACTATATACCTCAACAGCTTCAGAATTACAGTGAACACAGACTTCTGTCTGCA
    TCCCAGCGCTTCACCCGACGCAGAAGGTAACTGGGAACCACACACCAGGTGCCCCAGTCGACCAAACACACCTCGCTCCA
    GCGTCTTCCATTTGCCTTAGAAGTGGGAGGTGAACAGGAGTAACCAGGGGAGACCCCCAGAGAAGGACGGGAGGGGGGAC
    ACTCAGGATCCTCGGCTGCCAGACGCGCTCAGTTTCTTTTTCTCAGCGTCACATCCTACGCACCTTTGTGATCTAAGCAG
    AAGCACAAAGTTTATCCAGTCAAGCCTACAGGGACCACAGAGGCTCAGAAGGTACCTTGTTCTTCTTTTTTTCCCTGTGT
    TTTGTCTTCAATCATCCACCCAGAAGAGAGAAGAAGAAGGAGAAGGAGCTTCCTGGCAGATAGAAGGGAGTTTGGCAACA
    GTTAAAGAGCGATAACGGCTGGAAATAAGCTTGAGATTGAAGAGGAGAATGCAGCGCTTATCGCCTTGACTGGGAATGGA
    CCCAACCTCTCAGCACTGAGGCGGACAAGTCGATGAAATACAGCAGTCTGTAGCTTCCGTGTCCATCCTGCGCTACCTGT
    CGCACCGCCCCGGGCTCGCGATGGTTGTCCACTGAAGTGGGCGCCAGCGAATGCTGAGCAGGCTGGAGAGACTGAGGCCC
    GCCTCGGCGTCCTGTGATTGGCAGCCAGACGGGACTGAGGCCGGATGGAGCCAATGTCAAACGAGCCGGAAAGCAACACA
    TCAGAGGGAGATGAGAAAGGGTGGCCAAATGTGCCGAAGAGGAGGTGTAAGAACAGCCATTGTTCAGAGAAGAGTATGTC
    TGCTTTTAGTGTCTCTGTTCCAGGTTACATCCCCAGCTACCTGGAGAAGGATGAGCCGTGTGTGGTCTGTGGGGATAAAG
    CTACTGGTTACCACTATCGCTGCATCACATGTGAGGGTTGCAAGGGTTTCTTCCGTAGAACCATTCAGAAGAACCTTCAT
    CCAGCCTACTCCTGCAAGTATGAAGGCTGCTGCATCATTGACAAGATCACACGGAACCAGTGTCAGCTGTGCCGCTTCAA
    AAAGTGCACCTCCGTGGGCATGGCCATGGACTTGGTCTTGGATGATTCAAAGCGCGTAGCCAAGCGCCGTCTGATCGAGG
    AGAACCGACAGAGGAGGAAGAAGGAGGAGATGGTTCGGATGCTGCAAGCGAGGCCGGAGCCGGACACGGCGGAGTGGGAG
    CTAATCAGGATGGTGACTGAAGCCCACCGACACACCAACGCCGAAGGCTCCACCTGGAAACAGAAGCGCAAATTTCTGTC
    CGATGACATTGGACAGGGTCCAGTGGTGCCCTCTTCAGATGGAGATAAGGTGGACCTGGAGGCCTTCAGTGAATTCACCA
    AGATCATGACTCCTGCCATCACCCGCGTCGTCGACTTTGCCAAGAAGCTGCCCATGTTCTCAGAGTTGCCATGCGAAGAT
    CAGATCATCCTCCTGAAGGGTTGCTGCATGGAGATCATGTCGCTGCGCGCCGCGGTGCGCTACGACCCGGAGAGCGAGAC
    GCTGACGCTTAGCGGGAAAATCGCGGTGAAACGCGAGCAGCTGAAGAACGGCGGCTTGGGCGTGGTGTCGGACGCCATCT
    TTGATTTGGGCAAAAGCCTGGCTCAGTTTAACCTGGACGACACGGAGGTGGCGCTGATGCAGGCGGTGCTGCTTATGAGC
    TCAGACCGCTCAGGCCTGACCAGCGTGGAGAAGATCGAACAGTGCCAAGAGGCCTACCTGTTGGCGTTCGAGCACTACAT
    CAACTACCGCAAACACCAGATTCCCCACTTCTGGCCCAAGCTGCTGATGAAGGTGACGGACCTCCGCATGATCGGAGCCT
    GCCACGCTAGCCGCTTCCTCCATATGAAGGTGGAATGTCCCAACGAACTGTTTCCGCCTCTCTTCCTGGAGGTCTTTGAG
    GACCAAGAAGTGTGATTGATTTCCTGAGTGACCCCCCCCTTCCTGAGAGAAGCCTGAACACTAAAGAGAAAGGCAGTAGA
    GTAAGTGAGAAGGGGAACGAGAAAAGGACAATAGCGTTAGCGTCTATATTGGGAACGTGCCCTGGGAACTTCTTCTTTCA
    GTTGGTGTTTGGTTTTTTTTTACACCCCCACAACCCCCGCCACCAGCAGTCGCACCTCAACCTTACGGGAAACTTAGGAA
    AACTTCTGGATTTCTGCTTCCGTTGTAAAGAGTCACAGATTCCACGCACACCGCCGCGACCATACAGTCGATAGATATGC
    AAACGTAGCTCCCCTTTACGCACCAGTACGGACAAAACATCCATGCTCATGTCAACAGGGG
    Send to
    		or

    >XM_011605356.1 Takifugu rubripes thrab partial mRNA
    TGTAAGTACGATGGCTGCTGCATCATCGACAAGATCACCCGCAACCAGTGTCAGCTGTGCCGCTTCAAGAAGTGCACGGC
    AGTGGGCATGGCCATGGACCTGGTGCTGGACGAATCGAAGCGGGTGGCTAAACGGCGCCTTATCGAGGAGAACAGGGAGC
    GTCGCAAGAAGGAGGAGATGGTGAAGACGCTCCAGAACCGTCCGGAGCCGACCGGGGACGAGTGGGAGCTGATCCAGTCG
    GTGACCGAGGCCCACCGACACACCAACGCTCAGGGCGCCCACTGGAAACAGAAGCGCAAATTCCTGCCGGACAAGATCGG
    CCAGTCTCCGGTGGCGCCCACGTCAGACGGGGACAAGGTGGACCTGGAGGCCTTCAGCGAGTTCACCAAGATCATCACTC
    CTGCCATCACCCGCGTCGTCGACTTTGCCAAAAAACTGCCCATGTTCTCAGAGCTGCCCTGCGAGGACCAGATCATCCTG
    CTGAAGGGCTGCTGCATGGAGATCATGTCGCTGCGCGCCGCCATGCGCTACGACCCGGAGAGCGAGACGCTGACGCTGAG
    CGGGGAGATGGCCGTCAAGCGGGAGCAGCTGAAGAACGGCGGGCTGGGGGTGGTGTCGGACGCCATCTTTGATTTGGGCA
    AGAGCCTGGCGCAGTTCAACCTGGACGACGCGGAGGTGGCGCTGCTGCAGGCCGTGCTGCTAATGAGCTCAGACCGCTCC
    GGCCTGACGTGCACGGACAAGATCGAGAAGTGCCAGGAGACCTACCTGCTGGCGTTTGAGCACTACATCAACTATCGCAA
    GCACAACATTCCCCACTTCTGGCCCAAGCTCCTGATGAAGGTGACGGACCTGCGCATGATCGGAGCGTGCCACGCCAGCC
    GCTTCCTCCACATGAAGGTGGAGTGTCCCAACGAACTCTTTCCCCCGCTCTTCCTGGAGGTCTTCGAGGACCAGGAAGTG
    TAAGACGCAGCCGCCACCGTGGAAAGGGGAGAGGAAGT
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E. Kaitetzidou
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