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THRa (Thyroid Hormone Receptor alpha)

Organism
Solea senegalensis (Senegalese sole)
GO term(s)
Molecular Function: GO: 0003677, GO:0003700, GO: 0003707
Cellular Component: GO: 0005634
Biological Process: GO: 0006355
Paralogs
Sequencing Methods
thraa: Sanger sequencing

thrab: Sanger sequencing
Citations
  • Manchado,M., Infante,C., Rebordinos,L. and Canavate,J.P. (2009) Molecular characterization, gene expression and transcriptional regulation of thyroid hormone receptors in Senegalese sole. General and Comparative Endocrinology, 160(2): 139-147
    • Sequence >AB366000.1 Solea senegalensis thraa
    ATTGAAGGCGCCGGCGGCGAATGCTGAGCAGGCTGGCGAGATTATGGTCCGCCTCATTGTCCTGTGATTGGCCGCTGGAC
    CACGCCGAGGTTAAACCGAGCCAATGTCCAACAAGCAGGATAGCAACTCGTCTGAGGGGGACGATAAAGGGTGGCCAGAT
    GTGCCAAAGAGAAAGAGGAAGAACAGCCAGTGTTCGGTGAAGAGTATGTCTGCTCTTAGCGTCTCTGTTCCAGGGTACAT
    CCCCAGCTACCTGGAGAAGGACGAGCCGTGTGTGGTGTGCGGGGACAAGGCCACTGGCTACCACTACCGCTGCATCACCT
    GCGAGGGATGCAAGGGTTTCTTCCGAAGAACCATCCAGAAAAACCTCCACCCATCATACTCCTGTAAATATGAAGGCTGC
    TGCATTATTGACAAGATCACCCGCAACCAGTGTCAGCTGTGCCGCTTTAAGAAGTGCATCTCTGTGGGCATGGCCATGGA
    CTTGGTGCTGGATGAGGCCAAGCGAGTGGCCAAGCGGCGTCTGATCGAGGAAAACCGAGAGAAAAGGAAGAAGGAGGAGA
    TGGTCCGGACGCTGCAGGTGAGGCCAGAGCCGGACACAGCGGAGTGGGAGTTGATCAGGATGGCGACCGAGGCCCACCGG
    TACACCAACGCCCAGGGATCCAGCTGGAAACAGAAGCGCAAGTTCATGCCGGATGATATCGGCCAAGGTCCGATGGTTCC
    AACCTCCGATGGTGATAAAGTGGACCTGGAAGCTTTCAGTGAGTTCACCAAGATAATGACACCCGCCATCACACGTGTCG
    TTGACTTTGCCAAGAAATTGCCCATGTTCTCAGAGCTGCCTTGTGAAGACCAGATCATCCTGCTGAAAGGCTGCTGCATG
    GAGATCATGTCACTGCGCGCCGCCGTGCGCTACGACCCAGAGAGCGAGACGCTGACGCTGAACGGTGAGATGGCGGTGAA
    GCGCGAGCAGCTGAAGAACGGCGGGTTGGGAGTGGTCTCGGACGCCATCTTTGATTTGGGCAAGAGTCTGGCTCAGTTTA
    ACCTGGATGACACGGAGGTGGCGCTGATGCAGGCTGTGCTACTCATGAGCTCAGATCGCTCGGGGCTGACCAGCATAGAA
    AAGATTGAGCAGTGCCAAGAGGCGTACCTGCTGGCGTTCGAACACTACATCAACCATCGCAAGCACAACATCCGCCACTT
    CTGGCCCAAGCTGCTGATGAAGGTAACAGACCTGCGAATGATCGGAGCGTGCCATGCCAGTCGCTTCCTCCACATGAAGG
    TGGAGTGTCCCAGCGAACTCTTTCCCCCGCTCTTCCTTGAGGTGTTTGAGGACCAGGAAGTGTAACACAGACACAGAAGT
    AAAGAAAAGACAGAGAAGTAAAAGAAAAAAGGGGTGGCTGTGGTGTCGGAGGAAATGTTTTGGCAATGTTCAAAGGAGAA
    AACAAACCAGATTTTGTTTTTTTATTCGTCTTCAGTGAGAACTGAAAACTTTTGTTCCCCCCCTTTTGCCCCCCCCCCTT
    TTTCTTTTTTTTATCAAAACCTACAAGACCCACCACCTACCACCAGCAAACACATTAACATAACCAGAGAGAAACACACT
    GCTACTCTTTGTCATTTTGAGAGGTCTATGATACACACACGGGGGCATAATAGTCAGCCTTTTCACAGGGTTCAATTCCA
    AACACAGTGCCATGAAACTGCAGAATATCTATATGCAAACACAAAGTATCATCAACATTTAACTCCTTTTTACATCCGTG
    TGGAAACAAATAACAGCTGCACTCTGTTCCTGCAACTCATGCAAACTAAGGTTATGGTTCTACTCCTTCCTCACACCCTT
    CAGTATAGAACAGTGTAGTCCTTCTAATCTCTGGGACCTGACCACTAGCTGCTCCTCAGAGAGCTCCACCCTGTCCACAC
    AGCCAGCTCTCCTTCTCTGCGTCTCTTTCACTGCGACGGTGACCGGCCATCATCTGCACGCGCAGTCCCGCCCCTTCAGT
    CCGCCGAGGTCACTGTGAGTGTTTGTCAACCTACCTCCCCTCACACGCCGGACCTCTCTATCTCCGTCTGAACATGCACA
    GAACACACACACACACAAAAAGCAGCAGCGTGCACACACAGCAATATTGTGTGCAGGCACAAGCAGGAAAGTCTCACACC
    CACCAAACCCTATCCAGGTCTGCTGCGTTTGTAACGAACTCTGCTCACGATCACTGTGAATGAAAGCCATGCTGCAACCA
    GGTCATGGCTCAGACAGGGAAACACTGGCTTAGTAATTCTGACATGTCAATGTGCCTCACAGAGGTTAGTAATGCAAAAT
    ATACACTATATAAATACAGAATAATACAAAGTATATACAATATATAAATGTTATAGTCACTTTATGTGGCATTGGAGCGA
    CCAGTGGCTGAATATAACGCTTCCAGCTCGGTCATGTAGCGGATGGTGTCGGAATTCAAGTTTACGCACCTGTGTGACTA
    TCTGTAAAGTAATATTTACCAGTAGTTTTCAGGTGTTTGCCTTGCGGTGATCGACCAGCTCACCATCCTGGTCTAGCTGC
    TGCTTGCATACCCCGAGATCACGACAAGGAGCACAAGAATGACCTGAAACAGAAATGTGTGTATGCGAGACAAAGATGGG
    ATCTGGTCTCCGGTCCGCACGGCTCCATGAACTGGGATTTGAGCTGGAAGCACAGCCTCTTTGTACGTCTCTATTGCTCT
    CTCACACTCAGCCAAATGATCAACGGAGAACTCCTCCCGCTGTCCTTTTAAAAATAAAGAAAGACAAACAAAAAAAAAA
    Send to
    		or

    >AB444623.1 Solea senegalensis thrab
    CAAGCACATACAATGTGACTGACTGGTTGTCACTCCACCCTCCATATTCCTGAGATCAACATCCACCTCACGAGCCCTCT
    CCGGCCTGCCCATTTTACCCCAGACATACCTCCGACGTCTCACATACTTTGCAGCTTCACACCGAGCTACAAAACACCAG
    CCTCGAAGGGGGTCCACTCCTTTTTGGAGGCCCTCTTCCCCCCCTCCCCTTAGGGACGGGACCCTGTCATGTTTCACTGA
    TCGACTCCTCCCGACCAGCGAATGACAAGTGTGCATCCGAGGGTGGGGCTTGCCTCAGTCTCTCATAATTGGCTGCTGGA
    TGGAATTAAGGTGAATGGAACACATGCCCAAGGAGCAGGACTCTAACCCATCAGAGGGAGAGGAGAAAGGGTGGCTCAAT
    GGCCCGAAAAGGAAGAGGAAGAACAGCCAATGTTCAGTGAAGAGTATGACTGGGTATATACCCAGCTACCTCGAAAAGGA
    TGAGCCATGCGTGGTGTGTGGCGACAAGGCCACAGGTTACCACTACCGCTGCATTACATGCGAGGGCTGCAAGGGATTTT
    TCCGCAGGACCATACAAAAGAACCTCCACCCGGCCTACTCCTGTAAGTATGACTGCTGCTGCATCATCGACAAGATCACC
    CGCAACCAGTGCCAGCTATGCCGCTTCAAGAAGTGTATTGCAGTGGGCATGGCAATGGACTTGGTGCTCGATGAATCGAA
    GCGGGTTGCTAAACGGCGGCTGATTGAGCAGAACAGGGAGAAACGCAAAAAGGAGGAAATGGTGAAGACCCTCCAGAACC
    GTCCAGAGCCCACAGGGGCCGAGTGGGAGCTGATCCGCCATGTCACGGAGGCCCATCGACACACCAATGCTCAGGGTGCA
    CAGTGGAAACAGAAACGAAAATTCCTGCCGGACAAAATTGGCCAGTCCCCGGTTACCCCCACATCAGATGGAGACAAGGT
    GGACCTGGAGGCCTTCAGCGAGTTCACCAAGATCATCACTCCTGCCATCACTCGCGTCGTCGACTTTGCCAAAAAACTGC
    CCATGTTCTCTGAGCTGCCTTGTGAAGACCAGATCATCCTGTTGAAGGGCTGCTGCATGGAGATCATGTCCCTGCGAGCT
    GCCATCCGCTACGATCCCGAGAGTGAGACGCTCACGCTGAGCGGGGAGATGGCTGTGAAGCGCGAGCAACTGAAGAACGG
    CGGCTTGGGCGTGGTGTCGGACGCCATCTTCGATTTGGGCAAGAGCCTGGCACAGTTCAACCTAGATGACACGGAGGTGG
    CGCTGTTGCAGGCCGTGCTGCTGATGAGCTCAGACCGCTCCGGCCTGACCTGTGTGGACAAGATCGAGAATTGCCAGGAG
    ACCTACCTGCTGGCGTTTGAGCACTACATCAACTACCGCAAGCACAACATTCCCCACTTCTGGCCGAAGCTCCTGATGAA
    GGTGACGGACCTGCGCATGATCGGGGCGTGCCACGCCAGCCGCTTCCTTCACATGAAGGTGGAGTGTCCCAACGAACTCT
    TCCCTCCGCTCTTCCTGGAGGTCTTCGAGGACCAGGAGGTGTGACACGCATCTGCGACCATGCGCGTGGAAGAGGAAGCT
    GGTGCTAAACGGTAGATGGGGAAGGGCCATCGTTTTTTTGTAGGGGAAGGATGGAGGGAGAGAGAGCCCTCTCGGCAGGA
    ATCTGCTTTTCTCCGCCGTCACATTTACCGCATGTGATTTGAAAAACCAAACTGGAAACAATAATGGCAAAAACAACACA
    CCAGCAACAGGAGAGTCGAGCAAACAAAGGAGTTTGTTTTTTTGAACACCCTCTCCTCCACCTCTTTCCCTTCCTTTTAC
    TTACCCCAGTTTTAAATCCGTGTGGGGGGCCCTTCTGTCTGAGCATGATGTCTTATCTAGCAAGAGTTGTAGCCATTTGC
    CAAGACCCACACACACACACACACACACACAC
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E. Kaitetzidou
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