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THRa (Thyroid Hormone Receptor alpha)

Organism
Poecilia formosa (Amazon molly)
GO term(s)
Molecular Function: GO: 0003677, GO:0003700, GO: 0003707
Cellular Component: GO: 0005634
Biological Process: GO: 0006355
Paralogs
Sequencing Methods
thraa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006800159.1) annotated using gene prediction method: Gnomon.

thrab: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006799946.1) annotated using gene prediction method: Gnomon.
Citations
Sequence >XM_007568266.1 Poecilia formosa thraa
GTTCCTGTCTTGCCAGTAGAGGGTGCTGCAGAGCCTAGTCAGGCATCATCCCCGCTTCCAGCTGACCCGCATTCACTAGC
GCTGTACAGACACGGGACAGGACCCGAGCGCGGCGAACTAGTCAACAACACCGTGGAGTTTCCTCCCCCACGTACACCGT
GACCGTGAAATTCTGGCAGTCCCGGGGTGGCAGGTCGCTGCTGTCGCCTGTTTTCGCTCTTGACAGCGCGTTGAAAGAGG
AAGCAGTCTCCCCCAGGAGCTTCAGGCGAACCGGCTGAAGCTGACCGGAATTACACTGTAGCGTTCATTTGTTTCTCTTT
TCTTTAATTTGCCGCTCCCGGTGACATGTTTTATGTCGACTCTGCTGGAGGTGCTTTTCTATCCGGAGTGGACTACAGCG
CTACAAAGTGACCCGGAGAAAGAGACAGAGGCGCCTCGCAGTCAGTCACGGCGGTGCAAGGTGGACATCCTGAGACAACC
AATCAGTTCTTGTCAAAAGGCAGAGGCGTTTATCAAGTCTTTATCCTCAGACGAATGCAGCTGCAAACACTAAAAACTGA
CAGTAGCACCTTTTTTACCTCCAACGATCGTCCCACAATCTTCCCAGAGAAAACTCTTGTTCTCTCTATCTCACAGGACT
CTAGAAGTTTTCTCTGTTTTACTCAGGTCTTTTCTCCCAATGCCTACCTCCTCCACTAATGCACTGTACCCAGAGACAAC
CTGCTTTACCTTCTAAACTCTTCAAGCTGATGAAGAGCATTGACTTAAGACCTCGAACATCCTGTCGTCTATATAACATA
AGCTACAAAGCATATATATAAGCTACAAAGCAGCCACACTGATCAACCTGGGCCAGTGGAAATTATTCAAACTGGAAGAC
GGACAATAGCTACTTCAGCCTCTCATCGTCCGCTTGTTGAATCTGGCCGAAAGCTTTATACCTCAGTTATTATTTTCTGG
AAGACATTTGTGTGCAGAAAACACAAGACGACAATCATTGACGTAATTGATCCAACAGACAGGAGTTAATATCCAAGCAA
GGTGCAAGCTGCAAAGTAGAGAAGCAGCACTGGTGTCTTCCATTTGCCTTGGGGAGAAAAAAATATGACCAGGGAGAAAA
GCGGAGCACTGCCTTGGAGAAAACATAACTTCATGTTTCCCAGCATATAAGCCGGACTATCTAAGCTATCTAAATACACC
AGCAAAAAACACAGGGGGCTTTCAGTGAGCTTATTTTTACACCTAAAGCCCCCAAGCAGCAGCAGAAGGTCTTGAAAATT
TTGCCAGCTCTTTCTGTGCTGCAATTGAGACACAAAGAATCTTTCTGGGAGTTCAAATGCAAATAATCCTCACAGGTGGC
AGAAGAGGCACAGAAGAACTGAGCAAGTGAAGAAGGATGTAATGCTCTCCGTCCAACTTGCCGTGCTCCCGTCCCGCGGT
TCCCGTTCACGGATTCCTCTGGTTGGCTGTTGAGAAGGCTGCCGGTGAATGCTGAGCAGATCGACCTGTCTGAGGTACGC
CTCCCGGCTCTGCGATTGGTCGCTGGATGCTACTGGAGTTGAACGGCAACGATGTTCGACAAGCAGGAGAGCAATTCATC
AGAGAGCGATGAGAAAGGATGGCCAGATGTGCCAAAGAGAAAGAGGAAAAACAGCCAGTGCTCCATGAAGAGCATGTCTG
CTCTTAGCGTCTCTGTTCCAGGATACATCCCCAGCTACCTGGAGAAGGATGAGCCGTGCGTGGTGTGTGGGGACAAGGCC
ACCGGCTACCACTACCGCTGCATAACCTGCGAAGGCTGCAAGGGTTTCTTCCGCAGGACAATCCAGAAAAATCTCCATCC
TTCTTACACCTGTAAATATGAAGGCTGCTGCATCATTGACAAGATCACACGCAATCAGTGCCAGCTGTGCAGATTCAAGA
AGTGCATCTCTGTGGGCATGGCCATGGACTTGGTGCTGGATGAGAGCAAGCGCGTGGCCAAGCGGCGCCTCATCGAAGAG
AACCGAGAGCGGAGGAAGAGGGAAGAGATGGTGCGGACGCTGCAGATCAGGCCGGAGCCAGACAGCGCAGAGTGGGAGCT
GATCAGGATGGTGACTGAGGCGCACCGGCACACCAACGCCCAGGGCTCCTCCTGGAAACAGAAGCGCAAATTTCTGGCGG
ACGACATCGGCCACGGTCAACTGATGCCCACTTCAGACGGAGATAAGGTCGACCTGGAGGTCTTCAGTGAGTTCACCAAG
ATCATGACCCCTGCCATCACCCGCGTTGTTGACTTTGCCAAGAAACTGCCCATGTTTTCAGAGCTGCCTTGTGAAGACCA
GATCATCCTGCTGAAGGGTTGCTGCATGGAGATCATGTCACTGCGCGCCGCCGTGCGCTACGACCCCGAAAGCGAAACGT
TGACGCTCAGCGGCGAGATGGCCGTAAAGCGTGAGCACTTGAAAAACGGCGGGCTCGGGGTGGTTTCGGACGCCATATTT
GATCTGGGCAAAAGCCTGGCACAGTTCAACTTGGATGACTCCGAGGTGGCACTGATGCAAGCGGTGCTGCTCATGAGCTC
AGATCGGTCGGGGCTGATGAGCGTGGAGAAGATCGAGCGGTGCCAGGAGGCCTACCTGCTGGCTTTCGAGCACTACATCA
ACTACCGTAAGCACAACATTCCCCACTTCTGGCCAAAGCTCTTGATGAAGGTCACAGACCTGCGGATGATCGGCGCCTGC
CACGCCAGCCGCTTCCTCCACATGAAGGTCGAGTGTCCAAACGAACTCTTCCCGCCACTCTTCCTGGAAGTCTTCGAGGA
CCAGGAAGTGTGACATCGCGCCCCGCAGCTTGGGGTTTGGCAGTAAAGGAAGCATCGGCCATGGATGAACATCATAGGAA
AAAACTGGATTTTGTTTTCATTTGTGAGAACGTGCCCTGTACATTTTTCTGTTATTTGCCCATTTCTGTCAAACACAAGA
CTTTGACCTTCTGCCACCAGCAAAATCTCATCAGCATCATGAAACAGGTGTTCTACAGCTGGTAGTTTTTCAAGACTATG
CCATAAACGTGCATCTATATGCAAATCCAAATTGCATCTATGAGGAGGGCTGGACTGGTGCCACACCTAATGCAAACTGA
GGGGCTTTGCTAGCGGCACACTTTAGTGAAATCTCAAGCACATGTCTTCGAGGGTTTTTTCTTGTCCTGGACCTGACATC
TGGCACTTTTGACAATCCCAACAACCATCCCACTGAACTCCCACCTCCCCAACATCTCCAAGAGCAAAAGCTTCCACTTT
CAATCCACTGTGGCCCTGAGAGTGTTTGTCAACCTACCTCCGTCACACAAACCTTCACACTGAGAAACACACTCACAGAA
TGTACGTGCACAAAAAAAACAACACCCCAACACTGTTACCTCATTTCTTGTCAAATGTATTTCTTTATTTATATTTGGTG
GGCAGGGAGGAGCCAGATGTAGTTCAGTTAGAGGATATGGAGCCATGCACCCCACAGTTACCCATATGCTACTGGCAACT
GCTGAGAGAACATTCAGAGAAAACTTTGTGTAAAACACTAATCTACAAAGCATTATTTGTACTACAAGTCTTATAGCCGA
GGACACTACAGCAATCACCGTGCGTCACTAGATGTGATGAACATCACAGTGCATTCTGTAAGCACTAAACTGTGAGTATG
TATGGAGTCTGATTTGAGTCAGTCTTGGCAAATAAAGCTTTTTGAATAGCAAACATTTGCAAAGTGCAGAAACTCAACAT
CGCTGTTCAAAACTCCTTCGCTGATCGGCCCTGTTGTAATTCACCCTGAGAAATCAAAGCCAATGGGAGAAATCCCTGAG
TGGAGATGAGAATTCAGCGGAGTTGCGTGGGAAGGCAACGGCCAGATGACTGGTGCTCCTTCAGTCTTCTGGGCTTTACT
TGCGAAGGTTCTCAAATCATATTTACATATTTTTAGGGTTACAAACAAATTTGTCTATATCTGCATATCCCAATTGGTAA
AATTTATGATTTCCAAGCAAATAATCTGAATAAATGTATAGCCTATTCATCTTA
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or

>XM_007572243.1 Poecilia formosa thrab
GAGCTGGATGGAATTGAGGTGAATGGAACACATGCCCAAGGAGCAGGACTCTAACCCATCAGAGGGAGAAGAGAAACAGT
GGCTCAATGGCCCTAAGAGGAAGAGGAAGAACAGCCAATGTTCGGTGAAGAGTATGACTGGGTACATCCCCAGCTACCTT
GAAAAGGATGAGCCATGCGTGGTGTGTGGCGACAAGGCCACAGGGTACCACTACCGCTGTATTACCTGCGAGGGCTGCAA
GGGTTTCTTTCGTAGGACCATTCAAAAGAACCTCCACCCCACCTACTCCTGCAAATATGATGGCTGCTGCATTATTGACA
AGATCACCCGGAACCAGTGCCAGCTGTGTCGCTTTAAGAAGTGCATCTCAGTGGGAATGGCCATGGACTTGGTCCTGGAT
GACTCAAAGCGGGTGGCCAAACGGCGCCTTATTGAGGAGAACAGGGAGAAACGCAAAAAGGAGGAGATGGTGAAGACCCT
GCAGACCCGTCCAGAGCCCACTGTGGCCGAGTGGGACCTGATCCGGCTGGTGACGGAGGCCCATCGGCATACCAACGCTC
AGGGCGCACAGTGGAAACAGAACCGCAAATTCCTGCCAGAGAAGATTGGCCAATCTCCGGTTGCCCCGACGTCCGACGGA
GACAAGGTGGACCTGGAAGCCTTCAGCGAATTCACCAAGATCATCACCCCTGCCATCACACGAGTAGTCGACTTTGCCAA
AAAACTGCCCATGTTCTCTGAGCTGCCTTGTGAAGACCAGATCATCTTGTTGAAGGGCTGCTGCATGGAGATCATGTCGT
TGCGAGCGGCAATCCGTTATGACCCCGAAAGCGAGACGCTGACGCTGAGCGGGGAGATAGCCGTGAAGCGCGAGCAGCTG
AAGAACGGAGGGCTGGGTGTGGTGTCTGACGCCATCTTTGATTTGGGCAAAAGCCTGGCGCAGTTCAACCTGGACGACAC
GGAAGTGGCGCTTCTGCAGGCCGTGCTTCTCATGAGCTCAGATCGCTCAGGCCTGACGTCTGTGGACAAGATAGAGAAGT
GCCAGGAGACGTACCTGCTGGCATTCGAGCACTACATCAACTACCGCAAGCACAACATTCCCCACTTCTGGCCCAAACTC
CTGATGAAGGTGACGGACCTGCGGATGATCGGCGCGTGCCACGCCAGCCGTTTCCTTCACATGAAGGTGGAGTGTCCCAA
CGAACTGTTCCCGCCGCTTTTCCTCGAGGTCTTCGAGGAACAGGAAGTGTGACACGTGCAGACGCCAGCGTGTGTAACGG
AAAGCAGGAAACGGGAGACGGGCTAAGCCACAGAGACGCGTGGAGAGTCTCATCGGCAGGAATTTGCGTTTCTCCGACAT
CAAATTCACAGTTTGTGGTTACAAAGAAACTGGATATAACCGGAAAGAAAACACACACCAGCAACGGGAGAATGGAACAA
GAACCTCCTCCCTTCTCTTTCTTACACCTTCTCCTGTTTAAACATCCGTGTGGGGGCCCTTCTGTCTGAGCAAGCTGTTT
TGTCCAGAAAGAGTTGTTGCCATTTGCCAAGACACATCCAAAAACACATAAAAACACTCACACACAGAGCCACAGCTTGT
TTCACCTCAGTTCTTCAGGGCAGCATTGTTTGTGGGGATCAGGTTCCCCTCCTTGTTTCCTTTTTTTTTTTTTTTTAAGC
TTCTCAGCGCTCACGTTTTGAAGCAGCATCAGAGCTGGTCAGGATCTTTCAGTATTATTTCTGAATAAGTGTTAAAACGG
TAGTTCAGAAAACACGGCGTCATTTCTCACAGTCATGTGAGCAATCGGCAAACACTGCGAGCTATTTTTTTTATTTTTTT
ATCTTTTTCCACATTTCTTTGGTGTGCAATGGCGCCAATGGAAGCAAAAGCAACCGGACTCGGCTGCCAGGTAAATCAAC
TCAATCTGAGCCGTTACTGCTGTTTTGTTGTTTTGTTTTGGAGCTGCTCCTCCTCTAAGATCCCACTGAAACAGGTGCTA
TATTTATATAAAAAAAGGCTAGTCCAGTTCGATGAAAATGTTCTGTCAGCCTTTAAAAAGGGGGCAGACCAAATCTACTT
TTTTTTCTCTTTTTTTTTTTTTGTCATTGGACCGGCTCCTGTGACTCATACACACACATACATACATACATACATACATA
CATATGTGCAAGCGGTCCTCGTCGCTGCCTGCGCAGCTCTCATACCGTCGTATGAATGACAATGAAGCGTTTCTGTCTCC
GAGGAGTTACGACTCTGAAAGAAGGAAAGGAAAAACGCGACGGGAGGAGGGAGAGATTCCCTTTGAGAAG
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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