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PPAR-alpha (Peroxisome proliferator-activated receptor alpha )

Organism
Sparus aurata (Gilthead sea bream)
GO term(s)
Molecular Function: GO:0003677
Cellular Component: GO:0005634
Biological Process: GO:0035358
Phylogeny
Paralogs
PPAR-alpha-1,
fish-it.org
Sequencing Methods
PPAR-alpha-1: Illumina paired end technology

PPAR-alpha-2: Sanger sequencing
Citations
  • Leaver MJ., Boukouvala E., Antonopoulou E., Diez A., Favre-Krey L., Ezaz MT., Bautista JM., Tocher DR., Krey G. (2005). Three peroxisome proliferator-activated receptor isotypes from each of two species of marine fish. Endocrinology 146 (7):3150-3162. doi: 10.1210/en.2004-1638.
  • Fish-it.org
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    Sequence >Sparus aurata PPARalpha-1
    ATGGTCGACATGGAAAGCCACTACCATCCCCCTTCGCCCCTGGAGGACTCGGTGCTGGGCAGCCCTCTGTGCGCCGGTGA
    CGACTTCATGGGCGGCATGGAGGAGCTCCAGGACATCTCCCAGTCCATCGACAACGACGCCCTCAGCTCCTTTGATGCCC
    CCGAATACCAGTCCTCCAGCAATGGCTCTGAAGGTTCCACTGTTTTAGATGCCCTGACGCCCGCATCCAGTCCGTCGTCG
    GTAGTTTACAGCATGGCGGCGGGCCAGGAGGACTTCTCATCTTCCTCCTCTTCACTTAACCTGGAGTGTCGAGTCTGCGC
    CGATCGCGCCTCGGGCTACCACTATGGAGTGCATGCTTGCGAGGGATGCAAGGGTTTTTTCCGGCGGACCATCCGTCTGA
    AGCTGGAATACGACAAGTGCGAGCGCCGCTGCAAAATTCAAAAGAAGAACCGCAACAAGTGCCAATACTGCCGCTTCCAG
    AAGTGCCTGTCAGTGGGCATGTCCCACAACGCTATCCGTTTCGGTCGGATGCCCCAGTCAGAGAAGCTAAAGCTAAAGGC
    GGAGATGGTGACGGGGGACAGGGAGGTTGAAGACCCCCAGGTATCCGACCAGAAGACACTGGCCAGGCAGATCTACGAGG
    CCTACCTCAAGAACTTCAACATGAACAAGGCCAAGGCTCGAACAATTCTCACCGGCAAGACCAGCACCCCTCCTTTCGTC
    ATCCACGACATGGAAACCCTCCAGCTGGCAGAGCAGACCCTGGTGGCAAAGATGGTGGGCTCGGCGGCCTCGCTGAAGGA
    CAGGGAGGCGGAAGTTCGCATCTTCCACTGCTGCCAGTGCACGTCGGTGGAAACGGTGACAGAGCTCACGGAGTTCGCGA
    AGTCCGTCCCCGGCTTCTCGAGCCTGGACCTCAACGATCAGGTGACTCTTTTGAAATACGGCGTGTACGAGGCCCTCTTC
    GCCTTGCTCGCCTCCAGCATGAACAAGGACGGGCTCCTCGTGGCGTACGGCTCAGGCTTCATCACCCGGGAATTCCTCAA
    GAGCCTGCGGCGGCCGTTCAGTGATATGATGGAGCCAAAGTTCCAGTTTGCAATGAAGTTCAACGGGCTGGAGCTGGACG
    ACAGTGACCTGGCTCTGTTTGTGGCTGCTATCATCTGCTGTGGAGACCGACCCGGCCTGGTGAATGTGGCGCACATCGAG
    CGAATGCAGGAGAGCATTGTGCAGGTGCTACAGCTCCATCTGCTGGCCAACCACCCTGATGACACTTTCCTCTTCCCCAA
    GCTGCTGCAGAAACTCGCCGACCTCCGGCAGCTTGTCACCGAGCACGCTCAGCTGGTGCAGGAGATCAAAAAGACAGAGG
    ACACTTCACTTCACCCGCTCCTGCAGGAGATCTACAGAGACATGTACTGA
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    		or

    >AY590299.1 Sparus aurata Peroxisome proliferator-activated receptor alpha2
    ATGGCGGGGGATCTCTTCAGCCCACCATCCCCACTGGGGGATTCCCTGCTGGACAGTCCGCTGTGTGGAGACCTGATGGA
    GGATCCCCGTGACATCTCCCAGTCCATAGGAGACGACACGCTGGGATTTGATTTCCCACAGTATCAGAGTACTGGCTCGG
    GGTCTGAGAGCTCCATCGCACTGGACACGTTGACCCCAGCCTCCAGTCCGTCTTCAGGGGTGTGTGGAGCCACACAGGGC
    CCAGAAGAGACCTCCACCCCCCTCAACCTGGAGTGCCGCATATGCTCTGACAAGGCTTCAGGCTTCCACTACGGCGTGCA
    TGCCTGTGAGGGCTGCAAGGGTTTCTTCAGGAGGACCATCAGACTAAGGCTGGAGTACGACAAGTGTGAACGCAACTGCA
    AGATCCAAAAGAAGAACCGCAACAAGTGCCAGTACTGCCGATTCCACAAGTGCCTCTCTGTGGGCATGTCCCACAACGCC
    ATCCGGTTTGGTCGGATGCCTCAGGCGGAGAAACTAAAGCTCAAAGCAGAACGAAAGGTGGTGGAGAAAGAGGTGGCGGG
    CCCCATGCTGGCCGACCACAAGATTCTGGTGAGGGAGATCCACGGAGCCTACATGAAGAACTTCAGCATGAACAAGGCTA
    AGGCGCGGCTCATACTCACCGGAAAGACCAGCAAGCAGCCTTTCATCATTCATGATATGGAGACGTTCCAGCTGGCAGAG
    AAGACGTTAGCGGCCCACATGGTAAACGGTGACAATCAGGAGCCCGAGAGCGGCCTTCAAGCTGGGGAGCTGGTTCCGGC
    TGTGGGTTGTGGGGAGCTCCAGCAGAGGGAGGCTGAAGCCAGGCTCTTCCACTGCTGCCAGAGTACGTCGGTGGAGACGG
    TCACGGAGCTGACGGAGTTCGCCAAGGCGGTGCCGGGTTTCCAGAGCCTGGATCTGAATGATCAGGTGACTCTCTTGAAG
    TATGGTGTTTATGAAGCCCTCTTCACCCTCCTGGCCTCCTGCATGAACAAAGACGGCCTCCTGGTGGCCCGCGGCGGAGG
    CTTCATCACCCGGGAGTTCCTCAAGAGCCTCCGACGGCCATTTAGTGACATGATGGAGCCCAAATTCCAGTTCGCCACGC
    GCTTCAACTCCCTGGAGCTAGACGACAGTGACCTGGCCCTTTTCGTGGCTGCCATTATCTGCTGCGGAGATCGCCCAGGC
    CTGGTGGATGTGCCTTTGGTGGAGCAGCTGCAAGAAAGCATCGTTCAGGTACTACGGCTCCACCTGCTGGCCAACCACCC
    CGACGACACCTTCCTTTTCCCCAGACTGCTGCAGAAACTGGCTGACCTCCGGGAGCTGGTCACGGAGCATGCTCAGCTGG
    TGCAGGAAATCAAGACGACGGAGGACACGTCGCTGCACCCGCTCCTGCAAGAAATCTACAGGGACATGTACTGA
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    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou E.Sarropoulou
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