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THRa (Thyroid Hormone Receptor alpha)

Organism
Cynoglossus semilaevis (Tongue sole)
GO term(s)
Molecular Function: GO: 0003677, GO:0003700, GO: 0003707
Cellular Component: GO: 0005634
Biological Process: GO: 0006355
Paralogs
Sequencing Methods
thraa: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007584644.1) and transcript sequence (KJ148635.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence

thrab: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007584016.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence.
Citations
Sequence >XM_008330713.1 Cynoglossus semilaevis thraa
GTTCTGATGAACCCACCTGCAGCAGATACAACTGTGAGAGAAGAGAAAATCATTTTCCTTCAGGAGAAGAATGCATCGCT
GTCCACTGCTTCCACCGACGTCCCGCCCGCTCTGCTCGTCCCATGTTCTCAGATGGCCGTCTGTTGAAGCCGCTGGCGGT
GAATGCTGAGCAGGCTGGCGAGGTCAGGCTCCGCCTCATTGTCCTGTGATTGGCTACTGGACCAGACCGAGGTCAATGGA
GCCAATGCCCAACAAGCAGGATAGCAACTCGTCTGAGGGGGACGAGAAAGGGTGGCCAGATGTGCCGAAGAGGAAGAGGA
AGAACAGCCTGTGTTCGGTGAAGAGCATGTCTGCTCTTAGCATCTCTGTTCCAGGGTACATCCCCAGCTACCTGGAGAAG
GACGAGCCGTGTGTGGTGTGTGGGGACAAGGCCACGGGCTACCACTACCGCTGCATCACCTGTGAGGGCTGCAAGGGATT
CTTCCGCAGAACCATCCAGAAGAACCTCCACCCGTCCTACTCCTGTAAATACGAAGGCTGCTGCATCATCGACAAGATCA
CCCGCAACCAGTGTCAGCTGTGCCGCTTCAAGAAGTGCATCTCTGTGGGCATGGCCATGGACCTGGTGCTGGACGAGACG
AAGCGAGTGGCCAAACGGCGCCTCATTGAGTCCAACAGAGAGAAGAGGAAGAAGGAGGAAATCGTCCGGACTCTGAAGAC
CAGGCCGGAGCCCGACACGGCAGAGTGGGAGTTGATCCGGTTGGCGACGGAGGCTCACCGGAACACCAACGCCCAGGGAT
CCAGCTGGAAACAGAAACGCAAATTCATGCCTGATGATATCGGCCAGGGTCCGATGGCGCCCACCTCCGACGGAGACAAA
GTGGACCTGGAAGCCTTCAGCGAGTTCACGAAGATCATGACGCCTGCCATCACGCGCGTGGTCGACTTTGCCAAGAAGCT
GCCGATGTTCTCGGAGCTGCCGTGTGAAGACCAGATCATCCTCCTGAAGGGCTGCTGCATGGAGATCATGTCGCTGCGCG
CCGCCGTACGCTACGACCCAGACAGCGAGACGCTGACGCTGAGCGGCGAGATGGCGGTTAAACGTGAGCAGCTGAAGAAC
GGCGGGCTGGGAGTGGTGTCGGACGCCATCTTTGATTTGGGCAAGAGTCTGGCTCAGTTTAATCTGGATGACACGGAGGT
GGCGCTGTTGCAGGCGGTGCTTCTCATGAGCTCAGACCGCTGCGGGCTGACCAGCGTGGAGAAGATCGAGCAGTGCCAGG
AAGCCTACCTGCTGGCCTTCGAGCACTACATCAACTACCGCAAGCACAACATCCGACACTTCTGGCCCAAACTCCTGATG
AAGGTGACCGACCTGCGCATGATCGGGGCGTGTCACGCCAGCCGCTTCCTCCACATGAAGGTGGAGTGTCCCAGTGAACT
GTTTCCCCCGCCCTTCCTTGAGGGCTTCGAGCACCAGCAGGCGTGAACACCCACCAAACCACCACACACACACACACACA
GGAAGAGGAGGCGTGGTTCAAAAGGAGAACGAAAAAAACTGGATTTTTCTTCAGTGAGTCCTCCACTGTGGTTTTTTTAT
AAATCTACAAACTCACCTCCTGCCACCAGCAAAACCTAAACAGGGAAACCAGGAAAACCAGGAAACAGGAAACAGGAAAC
AGGAAACAGGAAACACTGACCACCAGTCTGGATCTGCTGCGTCTCTGAGAGAAAGTCAAAACAAAGTTCCAAAAAATCCA
AACGTAGTGCCATAAAAGTTCAGAACATCTTTATGCAACACAGTGGTTCACACACACACACACACACACACACTTTTTAC
CTCATATTTTTTTAATGTTTTTTGTATTTTTTTATTTTAGGAACCGTTTCTCTGTCACACACACACACACACACACCAGC
TTTAAAATAAAGACAGCGTTTAAATGGAAAAAAAAAAAAAAAAAAAAAAAAA
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>XM_008314418.1 Cynoglossus semilaevis thrab
GTAAGGATGGAGGGAGGGAGCTAGAGTCCAGTGATGCAGAGGTGGATAAAAAAGGGCAGCGGAGGATGATCCACATTTCA
CATGTGATCGCTCAGTCATGTGTCTGTGTATAGTCTGTGCTTTACAGAGGTGGTCCTGTAGAGAGCGGTAGATAGTTTGT
AGAAAGTGGCTGTAGTACAGCACACGGCTCCCGTTACTGTACACAAGCAGGAGGGAGGAGCAATCGTGTAGTATTTCTTT
TTTGGTTCTTTCCCTTGTCGTTGCGACCCATATAAACGCTCGAGGAAGGCAGCGAAACGTGGAAAATAAAAACACTAAGT
AATCTTTTTTTTCCACGCAGAGCTTTTGCAGTGAAGAAGGAAGAAGGAAAGAAGGAGACGTGTGAGGAGGGAGAAGCTCC
TTGACGGTACGAGGACCAGCAGCAACTCAGCATTGGAGGACAGTGCCCAAGACCGAGACATTGGGGAAGGACGTGCAGCC
AAACGTCCATCCAGCAACACCGGCGCTACCCTCAGCCACAAACCCAGCGGAGCCCCAGCTGACTTTCACCCAGTTTCATC
CCCGCCTAATGCGCTAACAGTCGCAGCTTGTGCCCCGGACCGCGTGGGAGGTGTTGGTGGTGGAGGTGGTTAGTGGGGGT
CTGCTGGTAGAGGAGGAGGAGGTTGACGGACGAGTTCCCTCAAACCTGTGTGATGACAGCGTGGATCAGAAGCACAGTAA
CAGCACTGACGTAAGGACACCTGTCGACCGAGGGGCGGAGACGAGGCCTACCACCACACAACACGGGAGGCCTGGGGAAA
TCATTAACTGCACAAACACATTCAATATGACTGACTGGATCACTCTCCACCCGCCATATTCCTGAGACCAACATCCACCT
CCAGCCCTCTCTGGCCCCCCAGGCCTGCACATTAACCCCAGTCAAACCTCCAACGACTTGCATATCTTGCTGCTTCTCAC
CAATCTGCTTAACCGTTATCCTCAAAAGGGGGCTCTGCTCCATTTTGTAGACCCTTTTCTCCCTCCCAGCAGGGACGGGA
CCCTGTCATGTTTCACTGACTGACCCCTCCCAACCGGCGAATGACAAGCGTGCATCCGAGGGTGGGGCTTGCCTCAGTCT
CTCATAATTGGCTGCTGGATGGAATTAAGGTGAATGGAACACATGCCCAAGGAGCAGGACTCTAACCCATCAGAGGGAGA
AGAGAAACGGTGGCTCAATGGCCCGAAGAGAAAGAGGAAGAACAGCCAATGTTCGGTGAAGAGTATGACTGGGTACATCC
CCAGCTACCTCGAAAAGGATGAGCCATGTGTGGTGTGTGGTGACAAGGCCACAGGTTACCACTACCGATGCATTACATGC
GAGGGCTGCAAGGGTTTCTTCCGCAGGACCATACAAAAGAACCTCCACCCCTCCTACTCCTGTAAATATGACTGCTGCTG
CATCATCGACAAGATCACCCGCAACCAGTGTCAGCTATGCCGCTTCAAAAAGTGCATCGCAGTGGGCATGGCCATGGACT
TGGTGCTGGACGAGTCAAAGCGTGTGGCCAAACGGCGCCTGATCGAGGAGAACAGGGAAAAACGCAAAAAGGAGGAAATG
GTGAAGACCCTCCAGAACCGTCCGGAGCCCACCGGGGCCGAGTGGGAGCTGATCCGCCTGGTGACCGAGGCCCATCGACA
CACCAATGCTCAGGGCTCACAGTGGAAACAGAAGCGAAAATTCCTGCCGGACAAAATCGGCCAGTCCCCGGTGGCACCCA
CATCAGACGGAGACAAGGTGGACCTGGAGGCCTTCAGTGAATTCACCAAGATCATCACTCCTGCCATCACTCGTGTCGTT
GACTTTGCCAAAAAACTGCCCATGTTCTCTGAGCTGCCTTGTGAAGACCAGATCATCCTGTTGAAGGGCTGCTGCATGGA
GATCATGTCGCTGCGAGCCGCGATGCGCTATGATCCAGACAGCGAGACTCTGACGCTCAGTGGAGAGATGGCAGTGAAGA
GGGAACAGCTGAAAAACGGTGGCTTGGGTGTGGTGTCGGACGCCATCTTTGATTTGGGCAAGAGCCTGGCGCAGTTCAAC
CTGGACGACACAGAGGTGGCGCTATTGCAGGCGGTGCTGCTCATGAGCTCAGACCGCTCTGGCCTGACCTGCGTGGACAA
GATCGAGAAGTGTCAGGAGACGTACCTGCTAGCATTTGAGCACTACATCAACTACCGCAAGCACAACATTCCTCACTTCT
GGCCCAAGCTTCTGATGAAGGTGACAGACCTGCGGATGATCGGGGCGTGCCACGCCAGCCGCTTCCTTCACATGAAGGTG
GAGTGTCCCAATGAACTCTTCCCTCCGCTCTTCTTGGAGGTCTTTGAGGAACAGGATGTGTGAAACACAGCTGCCACAGA
GCGAGAGAAAAACAAAGTCGGGGGAAAATGGTCGATGGGAAGGGCCATTGTTTTTTTTTGGTAGGGGAAGGATGGAGGGA
GGAACCTGCCTTTCTCTGACATCACATTCTCAGTATGTGATTAAAAAAAAGAAACTGGAAACAACAATGACAAATCAACA
CACCAGCAGCAGAAGAGTC
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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