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WAP65 (Warm Acclimatation Protein 65)

Organism
Dicentrarchus labrax (European sea bass)
GO term(s)
Molecular Function: n/a
Cellular Component: n/a
Biological Process: n/a
Gene Expression
WAP65-1

Quantitative RT-PCR analysis of WA65-1 gene expression against two reference genes, L13a and EF-1alpha in eight different developmental stages


WAP65-2

Quantitative RT-PCR analysis of WA65-2 gene expression against two reference genes, L13a and EF-1alpha in eight different developmental stages
Gene Structure


Phylogeny
Paralogs
WAP65-1 ,
BK006867.1
WAP65-2
BK006868.1
Sequencing Methods
WAP65-1 : Sanger sequencing

WAP65-2: Sanger sequencing
Citations
  • Sarropoulou E., Fernandes JMO., Mitter K., Magoulas A., Mulero V., Sepulcrec MP., Figueras A., Novoa B., Kotoulas G. (2010). Evolution of a multifunctional gene: The warm temperature acclimation protein Wap65 in the European seabass Dicentrarchus labrax. Molecular Phylogenetics and Evolution 55: 640–649. doi:10.1016/j.ympev.2009.10.001.
  • Pierre S., Coupé S., Prévot-d’Alvise N., Gaillard S., Richard S., Gouze E., Aubert J., Grillasca JP. (2010). Cloning of Wap65 in sea bass (Dicentrarchus labrax) and sea bream (Sparus aurata) and expression in sea bass tissues. Comparative biochemistry and physiology Part B Biochemistry molecular biology 155:396–402. doi:10.1016/j.cbpb.2010.01.002.
    • Sequence
    >BK006867.1 Dicentrarchus labrax warm temperature acclimation protein 65-1
    GTACCTTTTGCCCAGCTCTGCTGTCAGTTCAGGCCCGACCAGTCTCTCCTGGACCAGAGGACTGCTTATCATGAAGCT
    GCTTGCCCACATCCTCTGCCTGGCCCTGGCCCTGGCTTGGGCTCAGTCGCAGGAAGAACATGCAGCTGCTGTCCTTGACC
    GTTGTAAAGGCCTTGAGATGGACGCTGTTGCAGTTAACGAAGAGGGAATCCCATACTTCTTCAAGGGTGACCATCTGTTC
    AAGGGCTTCCATGGCAAAGCAGAGCTGTCCAATGAGTCCTTCGCTGAGTTGGATGATCATCATCACCTGGGCCACGTAGA
    CGCTGCTTTCCGCATGCACTACGAAGACAACCCTACTGACCACGACCACATGTTCTTTTTCCTGAACAACAAGGTGTTCA
    GCTATTACCAACACAAGCTTGAAGACGGCTACCCCAAGGACATCTCCGAAGTCTTCCCTGGAATCCCTGACAACCTGGAC
    GCTGCTGTGGAGTGTCCCAAGCCAGAGTGCGATGAAGACTCTGTCATCTTCTTTAAGGGAGACGACATCTACCACTATAA
    CGTTAGAACCAAGGCTGTAGAGGAGAAAGAGTTCCAGTCCATGCCAAACTGCACATCCGCTTTCCGCTTTATGGAGCACT
    TTTACTGCTTCCATGGACACATGTTCTCCAAGTTTGACCCAAAAACTGGCGATGTGCATGGAAGATACCCCAAAGAGGCA
    CGTGACTACTTCATGAGATGCTCCAAGTTTAGTGACGACAGCGACCATGTGGAGAGAGAGCGCTGCAGCCGTGTTCACCT
    GGATGCCATTACATCTGACAACGCTGGGAACATGTATGCCTTCAGAGGCCACCATTTCCTCCGTAAAGATGAGGGCAATG
    ACACACTGAAGGCTGACACCATCGAGAACGCTTTCAAGGAGCTGCACAGTGAGGTGGACGCTGTTTTCACGTATGAGGAC
    CACCTTTACATGATCAAGGACGACCACCTCTTTCTTTACAAAGTTGGTGAGCCCCACACCCACCTGGACGGTTACCCAAA
    GCCTCTGAAGGATGAGCTGGGCATTGAGGGTCCCATTGATGCTGCATTCGTTTGCGAGGATCATCACATTGCTCACCTTA
    TCAAAGGTCAGAACATCTATGATGTGGAAYTGAAGGTCAACCCTCGTGTTGCAGGACATGAGCGTCCGATTTCCCTCTTC
    AAGAAGGTCGACGCTGCCATGTGCAATATCGAAGGAGTTAAGGTGTTCGTAGGCAACCACTTCTACCACTTTGACAGCGC
    CATGCTGTTTGTTGCTTCCAGGGCTCTGCCTGAGCAGCACAAGGTATCCCTGGAGGTGTTCGGCTGTGATCACTAAGATG
    CTTGCTTGACAGGACTAAATGGACTGTGCCAAATGTCACATACAACACGATGAAACATGGAAAAACAACAGCACCAACAA
    CATCACGCAGGAGGCGCCTAATAACAAGTCGCTAAGCTTTTGACAACATTTACTTACAGACAATGATGCAATGCTTCATA
    CCTTCTGAGTCTTACCTCAAAATAACCTTTTATCTGTTTTACTTCTTTTTGGAAGGGTTCTTCCTTTTCGTAACTCAGTG
    GTCCTCTATGTCAAGTGTGCTATCAAGAAGGGTATTACATGTTTCTCTGTGATTCATTGTGTACAGTGTTGTTGTGAATA
    AAGTGGAGAGGCAAC
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    		or


    >BK006868.1 Dicentrarchus labrax Warm acclimation protein 65-2
    GACAGCTCTGCTCCCAGTGAGACTCCACGCCAGAGGACTTCAGCATGGAGCTGTTCACCAAAACTCTGTTTCTGTGCTTA
    GCACTYGCCCTCACTAATGGAGCCCCTGCTCTACAACAAGATGCAGCAGTAGAAGATGCTGCTCTGCCAGACCGGTGTGA
    AGGCATTGAGTTTGATGCCATCACTCCTGACGAGAAAGGAACCACTTTCTTCTTCAAAGGTCCCCACTTGTGGAAGGGTT
    ATCATGGTTCGGCTCAGCCTTCCAATGAGCACTTCAAGGAGCTCGATGACATCCATAACATCGGCCACGTTGATGCTGCC
    TTCCGCATGCACAACATAGATAACCCAGACAAACACGATCACATCTATTTCTTCCTGGATGACAAGGTGTTCAGCTATTA
    TAACCACACCCTGGAAGACGGGTATCCTAAACAGATCCAAGATGACTTCCCAGGAGTCCCCACTCATCTGGATTCTGCTG
    TGGAGTGCCCCAAAGGAGAATGCATGGCTGACTCAGTTTTGTTCTTCAAGGGACATGATGTCCATCTTTATGATATTACC
    ACAAAGACAGTGAAGACCAAGACGTGGTCCCACCTGCCCGTCTGCACCTCTGCTTTACGCTGGCTGGAGCACTACTACTG
    TTTCCATGGACACAACTTCACCAGGTTCAACCCGGTATCCGGAGAGGTGAACGGTACCTACCCAAAGGACGCCCGCAATT
    ACTTCATGGGGTGCGCTGACTTTGGTCATGGAGGTGGTTATCGACCCCGTAAATGCAGTGAGGTCAAAATAGATGCCATC
    ACCACTGACGATGCTGGCAAAACTTATTTCTTTGCAGGCCCCATCTACATGCGTCTGGACACCCATCGAGACGGCCTTCA
    CGCCTTCCCGATCACCAGGGCGTGGAAGGAGGTGACCAATGGAGTGGACGCTGTCTTTTCCTACACTGACAAAATCTACT
    TGATTAAGGATGATCAGGTTTACATCTATAAAGCAGCGGCTCACTACACCCTGATCGAAGGTTACCCTAAGACTGTGAAG
    GAGGAGCTGGGCGTTGAAGGACGCGTGGACGCTGCTTTTGTGTGTCCTGATGACAACACAGTTCATATAATCCAAGGACA
    GAGGATTCTTTATGTTGACCTGACCGCCACGCCCAGGGCTGTGACCCAAAATCTGCCCTTGCCCTTGGACGGCATCGACG
    CTGCTCTGTGCAACGCAAAGGGAATTGACTTGTTCAAGGGCCCCCAGTATTACCACTATGAGAGCCCCATGATACTGGCT
    ATGGGCAGAATGGCCCCTTTGCCCGAGAACATCACCTCAACAATGATGGGATGTCAGGATTAGGAGAATATTTAACATTC
    ATCTGTTTATGTTTGGTGAATAAAAAGTGGAAAAACTRCMCWWWGTATTCTTCAAATCCACTCACCATATGAGGAGCGAG
    GAGCGAGTACAGACTGCAAACAGAATGACCAGCTCATCTGCT
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by Elena Sarropoulou
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