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HSP90 (heat shock protein HSP 90)

Organism
Lates calcarifer (Asian sea bass)
Paralogs
HSP90-alpha,
HQ646105.1
HSP90-beta
HQ646106
Citations
  • The gene expression response of the catadromous perciform barramundi (Lates calcarifer) to an acute heat stress: Analysis of gene expression, gene characterization and identification of suitable reference genes. Newton J.R. Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
  • fish-it.org.
    		•
    Sequence
    >HQ646105.1|Lates calcarifer HSP90-alpha
    ATGCCTGAGAGTGCTGGACACGTTATGGAGGAGGAAGTGGAGACCTTTGCCTTCCAGGCTGAGATTGCTCAGCTTATG
    TCTCTTATTATTAACACTTTCTACTCAAACAAAGAGATCTTCCTTAGAGAGCTCATCTCCAACTCTTCAGATGCCTTGGA
    CAAAATCAGATATGAAAGCTTGACAGACCCCAGCAGACTTGAGTCCTGCAAGGAGTTGAAAATTGAAATCAGGCCTGACC
    TGCACGCTCGCACCCTTACCCTGATTGACACAGGTATCGGCATGACCAAGGCCGATCTGATCAACAACCTTGGCACGATT
    GCTAAATCCGGCACCAAGGCTTTCATGGAGGCTCTGCAGGCTGGAGCTGACATCTCCATGATCGGTCAGTTCGGTGTGGG
    TTTCTACTCTGCCTACCTGGTGGCAGAGAAGGTGACGGTCATCACCAAGCACAATGATGACGAGCAGTATGTGTGGGAGT
    CTGCAGCTGGAGGCTCATTCACCGTCAGACCTGATACCGGAGAGTCTATTGGCAGAGGCACAAAAGTGATCCTTCACCTC
    AAGGAAGATCAGACAGAATACTGTGAGGAGAAGCGCATCAAAGAAGTTGTAAAGAAGCACTCACAGTTCATTGGCTACCC
    TATTACACTTTATGTGGAGAAGACAAGGGAGAAAGAAGTGGACCTTGAGGAGGGAGAGAAGGAAGAGGAAGTTGAGAAAG
    AGGCTGCTGAGAACAAGGACAAACCAAAGATTGAGGACGTTGGCTCAGACGAGGATGAAGACACAAAGGACGGCAAGAAC
    AAGAGGAAGAAGAAGGTCAAGGAAAAGTACATGGATGCTCAGGAGTTGAACAAGACCAAACCAATCTGGACCCGTAACCC
    AGATGACATCACCAATGAAGAGTACGGAGAGTTCTACAAGAGTCTCACCAACGACTGGGAGGACCACCTGGCTGTCAAGC
    ATTTCTCAGTGGAGGGTCAGCTGGAGTTCCGCGCCCTGCTCTTCGTGCCCAGAAGAGCTGCATTCGACCTCTTTGAAAAC
    AAGAAAAAGAGAAACAACATCAAGCTTTATGTGCGCAGGGTCTTCATTATGGACAACTGTGAGGAGCTGATTCCAGAGTA
    TCTCAATTTCATCAAGGGTGTGGTGGACTCTGAGGATCTGCCCTTGAACATCTCCAGAGAGATGCTGCAGCAGAGCAAGA
    TCCTGAAGGTCATCCGCAAGAACCTGGTCAAGAAGTGCCTGGAACTTTTCACTGAACTTGCTGAAGACAAAGACAACTAC
    AAGAAGTACTATGAGCAGTTCTCCAAGAACATTAAGCTCGGCATCCACGAGGATTCACAGAACAGGAAGAAACTGTCTGA
    GCTGCTGCGCTACTACACCTCAGCCTCTGGAGATGAGATGGTTTCCCTGAAGGACTATGTTTCTCGCATGAAGGACAACC
    AGAAACACATCTACTACATCACAGGTGAGACCAAAGACCAGGTGGCCAACTCTGCCTTTGTGGAGCGCCTTCGCAAAGCC
    GGCCTGGAGGTCATTTACATGATTGAGCCAATTGATGAGTACTGTGTCCAGCAGCTGAAGGAGTACGATGGCAAGAACCT
    GGTTTCAGTCACCAAGGAAGGCCTGGAGCTGCCTGAGGATGAGGATGAGAAGAAGAAGCAGGAGGAGCTCAAAAATAAAT
    TTGAGAACCTTTGCAAGATCATGAAAGACATCCTCGACAAGAAGATTGAAAAGGTTGTAGTTTCAAACCGCTTGGTGGCT
    TCCCCCTGCTGCATTGTTACCAGTACCTATGGCTGGACAGCTAACATGGAGAGGATCATGAAGTCTCAGGCTCTGAGAGA
    TAACTCCACCATGGGCTACATGACAGCTAAGAAGCACCTTGAGATCAACCCCCTGCATCCAATCATTGAGACCTTGAGGG
    AGAAGGCAGAGGCTGACAAGAATGATAAGGCTGTTAAGGACCTGGTCATCCTCCTGTTCGAGACTGCCTTGCTGTCCTCA
    GGATTCACACTGGAGGACCCGCAGACACACGCCAACCGCATCTACAGAATGATCAAGCTTGGTCTCGGCATTGATGATGA
    CGATTCTGCAGTTGAAGACATCATTCAGCCTGCTGATGAAGACATGCCAGTCTTGGCAGGAGATGACGACACATCAAGAA
    TGGAGGAAGTTGACTAA
    Send to
    		or


    >HQ646106.1Lates calcarifer HSP90-beta
    ATGCCTGAAGAAATGCACCAAGAGGAGGAGGCTGAGACCTTTGCCTTCCAGGCGGAGATTGCTCAGCTGATGTCCCTG
    ATTATCAACACCTTCTACTCCAACAAAGAGATCTTCCTTAGGGAGTTGATCTCCAATGCTTCTGATGCATTGGACAAAAT
    CCGCTATAAAAGCTTGACTGACCCCTCCAAGCTGGACAGTGGCAAGGATCTGAAGATTGACATCATCCCCAACAAAGCTG
    ACCGCACCTTGACCCTCATCGACACTGGAATCGGCATGACCAAAGCCGACTTGATTAACAACCTGGGTACCATCGCTGAG
    TCTGGCACCAAGGCCTTCATGGAGGCCCTGCAGGCTGGAGCTGACATCTCTATGATTGGTCAGTTTGGTGTGGGTTTCTA
    CTCTGCCTACCTTGTTGCTGAGAAAGTGGTCGTCATCACCAAACACAACGATGATGAGCAGTATGCCTGGGAGTCCTCTG
    CCGGAGGTTCCTTCACAGTCAAGGTCGACAACGGCGAGCCTGTTGGCCGTGGAACAAAGATCATCCTGTACCTGAAGGAG
    GACCAGACAGAGTACATTGAGGAGAAGAGGATCAAGGAGATTGTCAAGAAGCACTCTCAGTTCATCGGCTACCCCATCAC
    CCTGTTTGTGGAGAAGGAGCGTGACAAGGAGATCAGCGACGACGAGGCCGAGGAGGAGAAGGCAGAGAAGGAAGAGAAGG
    AGGATGGTGAGGACAAGCCAAAGATCAAGGATGTGGGCTCAGATGACGAGGAGGACTCCAAAGACAAGGACAAGAAGAAG
    AAAAAGAAGATCAAGGAGAAGTACATCGACCAGGAGGAGCTGAACAAGACCAAGCCCATCTGGACCAGAAACCCTGACGA
    CATCACAAACGAGGAGTACGGCGAGTTCTACAAGAGTCTGACCAACGACTGGGAGGATCACCTGGCTGTCAAGCACTTCT
    CAGTGGAGGGCCAGCTTGAGTTCCGGGCTCTGCTCTTTATTCCCCGCCGTGCACCTTTTGACCTCTTTGAGAACAAGAAG
    AAGAAGAATAACATCAAGCTGTACGTCAGGAGAGTCTTCATCATGGACAACTGTGAAGAACTCATCCCAGAGTACCTGAA
    CTTCGTCCGTGGTGTGGTGGACTCAGAGGACCTGCCCCTCAACATCTCCAGAGAAATGCTGCAGCAGAGCAAGATTTTCA
    AGGTCATCCGCAAGAACATCGTCAAGAAGTGTCTGGAGCTCTTTGCCGAACTGGCTGAGGACAAGGAGAACTACAAGAAG
    TTCTACGAGGCTTTCTCCAAGAACATCAAGCTGGGTATCCACGAGGACTCACAGAACCGCAAGAAGCTGTCTGAGCTGCT
    GCGCTACCACAGCTCCCAGTCTGGAGATGAGACCACCTCCCTCACAGAATACCTTTCTCGCATGAAGGAAAACCAGAAAT
    CTATCTACTACATCACCGGTGAGAGCAAGGATCAGGTGGCCAACTCCGCCTTTGTCGAGCGTGTCCGCAAGCGTGGCTTT
    GAGGTCCTGTACATGACAGAGCCCATTGATGAGTACTGTGTCCAGCAGCTCAAGGAGTTTGATGGCAAGAGCCTGGTCTC
    TGTCACCAAGGAGGGCCTGGAGCTGCCAGAGGACGAGGAGGAGAAGAAGAAGATGGAGGAGGACAAGGGTAAGTTTGAGA
    GCCTCTTCAAGCTCATGAAGGAGATCCTTGACAAGAAAGTGGAGAAGGTGACAGTGTCCAACAGACTGGTGTCCTCACCC
    TGCTGCATTGTGACAAGCACTTACGGCTGGACGGCCAACATGGAGAGGATCATGAAGGCCCAGGCACTCAGGGACAACTC
    CACCATGGGCTACATGATGGCCAAGAAGCACCTGGAGATCAACCCTGACCACCCCATCGTGGAGACTCTCAGGCAGAAGG
    CCGACGCTGACAAGAACGACAAGGCTGTGAAGGACCTCGTCATCCTGCTGTTCGAAACTGCCCTGCTGTCCTCAGGCTTC
    TCCCTGGACGACCCACAGACCCACTCCAACCGCATCTACAGAATGATTAAGCTCGGACTGGGCATCGATGACGACGATGT
    TCCCACAGAGGAGGCCACCTCTACAGCCGTCCCAGATGAGATTCCTCCCCTAGAAGGCGATGGTGACGATGATGCTTCAC
    GCATGGAAGAAGTTGATTAA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E.Sarropoulou
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