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otx2 (Homeobox Protein otx2)

Organism
Gasterosteus aculeatus (Threespine stickleback)
Phylogeny
Genomic Map Locations
otx2-a
ST_Chr.XVIII

otx2-b
ST_Chr.XV
Paralogs
Sequencing Methods
otx2-a: Downloaded from ENSEMBL database.

otx2-b: EST sequence
Sequence >ENSGACG00000012744 Gasterosteus aculeatus Homeobox Protein otx2-a
TGGGGGGCTCCCCCCCCCCGAACCCCTCGCAAACAGAGGAGAGAGAGGACGACCTTCACTCGGGCCCAGCTCGACCTGCT
GGAGAGTCTGTTCAACAAGACGCGGTACCCGGACATCTTCATGAGAGAGGAGATGGCCCTGAAGATCAACCTGCCTGAAT
CCAGAGTCCAGGTTTGGTTCAAGAACCGACGAGCCAAACACCGCCAGCAGGCCCAGCAGACCCAAAGTGGCGCGCAGAAC
AAGGCGGTCAGCAAGCCGGTGAAGAAGAAGAGCTCTCCGGTCAGAGAGGCCAGCTCGGAGAGCGGAGCCAGCGGGCAGTT
CACGCCGCCCCCGAGCACCGCGCTCCCGGCCGCGAGCAGCAGCGGCAGCGGCAGCGCGGCACCGGTGTCCATCTGGAGCC
CGGCCTCCATCTCCCCGCTCTCCGACCCGCTGTCCACCTCCTCCTCCTGCATGCAGCGCTCTTATCCCATGACCTACAGC
CAGGCGTCGGGCTACAACCAGGGCTACACGGGCTCCTCGTCCTACTTCACCGGGATGGACTGCGGCTCCTACCTCTCGCC
CATGCACCACCAGCTCTCCGCCGCCGGCTCCGCCATGAGCCCCATGGGGAGCAACGGGGTCTCCGGCCACCTGAGCAACG
CGTCGTCCCTCTCCTCGTCGGCGTACGGCGCGGCGGGGCTCGGCTTCGGCAGCGCCGCGGACTGCCTGGACTACAAGGAC
CAAACGGCCTCGTCGTGGAAGCTCAATTTCAACGCGGACTGTTTGGATTACAAAGACCAAGCGGCGTGGAAGTTCCAGGT
GTTGTGA
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or

>DW609494.1 Gasterosteus aceluatus otx2-b
CCCCNNNNAAATGTTTTATAAAAAGCTGATTGGCNCNANAACTATTATTGATTCTTATAAACACTTTTTTTTCTTCTTAA
ATAAAGTAGTGCATCCGTGTCCACGTCCCGTCCGCGTGTGTCTCTGCCAGCAGGTCCTCGGCAGATGCTTTCGGAGGTCC
GTCACGAGGAGACGAGTGACCGTGAAACATTAGTTCCGTGGGTGCGGTGCCCCCCCCCCTCAACAGGTGTGTTTTTTTAC
GCACAGAGGCACGCGCTGACTTGCATGGACGAGGGGCTACAACCGGTGAACGAACGGGAAAGAAATCTCTTAGCCGGTGC
TAAAATAAATTAAACTTCTCCTCTAGGAGGACGAAAGACCATCATGCCGAAACCCCCGAGCCCCCCCCCCGAGAGCCCCC
GCCTCGCCGAGCCCGGATGACATTTTAACCCGTTCGATGTGTTTTACTGAAGGGCGGAGGGCGGCGTCGTGTCTGATGTG
ATCGTCACTGTTTTTTTTGTTGTTGTTTGTTTATTTTTGTTGTTGTTGACAGCGGATCGCTCCGTTCACAGGACCTGTAA
TTTCCACGAGGAGGTTTGGTCCTTATAATCCAAGCAATCGGCATTGAAGTTCAACTTCCACGACGCCGCTTGGTCCTTAT
AATCCAAGCAGTCCGCGGTGGAGTTGAAGCCCAGGCCGGACGTCCCGTAGCCCTGGCTGGAGAGGGGCGCCGAGGACTGG
TTCAGATGGCTGGTGACCGCGTTCGTGCCCATCGGGCTGAGAGTTGAGCCGGGGCCGGACAACTGGTGGTGCATGGGAGC
GAGGTAGGAGCCGCAGTCCATGCCGCCGAAGTAGGAGGTCGAGCCGGAGTAGCTCTGGCTGTANCCCGAGGCCTGGGTGT
ACGTCATGGGATACGACCTCTGCATGCANGAGGAGGTAGTANACAGGTGGTCTGACAGCGGANAGATGGACGCGGTGCTC
CAGATGGACACCGGGGCGGTGCTGGTGGANATGACGGGGGCAGTGGTGGTGCTCGCGGGGGGCGTGACTGGCCGCTGGCC
CCGCTCTCTGGACTCACTCTCTGG
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or



Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by M.Iliopoulou E.Sarropoulou
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