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IL-I (Interleukin-I)

Organism
Tetraodon nigroviridis (Tetraodon)
Phylogeny
Synteny
Paralogs
Sequencing Methods
Il-1b: Sanger sequencing

Il-1fm: Sanger sequencing
Citations
  • Angosto D., Montero J., López-Muñoz A., Alcaraz-Pérez F., Bird S., Sarropoulou E., Abellán E., Meseguer J., Sepulcre MP., Mulero V. (2013). Identification and functional characterization of a new IL-1 family member, IL-1Fm2, in most evolutionarily advanced fish. Innate immunity. doi:10.1177/1753425913501011.
  • Data input by Mara Iliopoulou
    		•
    Sequence
    >AJ574910.1 Tetraodon nigroviridis Interleukin-Ib
    GTGTATGTGTGTGTGTGTGAGTGTGTGTGTGTGTGCTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTG
    TGTGTGCTGTATGTCACAATCAATTAGCTACCTGAGCAATCTCAGAGTTTTTCATCATCACAGCCTTCCTCTTCCTGCCT
    TTGGGGGGAATTCCCTCGTGTGGCTGAATAAAAGCAGCCAGCGTGACCAAGATGAGCAGAACACAGCTGGACGCCAAACC
    AGACACACTCCAACCACCCAGAACCTCCTCAACCTAAAGGTAAACAGATCCCTCCAGACATTTCTTGCCGATTTCAAAGC
    AGCTTTGCTGAAGAGTAGAGTTAGGTTGGTGCTTGTTTCAGTTTTGTCTGCTGCATTTGGAGGACAAAACTGATGTATTT
    TGACACGATAGAGACACAGTTGGACGTCTGTGGAAAGATAATCTAGAGTGGTCTTTTACATCTTATTTCTGTATCTTTCT
    GCAGTACATTTCTAATTCAAGAAAAGATGGAATCACAGATGTCCAACAACGGCAAGATGCTGAAGTCTAAGATGCCAGAA
    GGGCTCGACTTGGAGATTTCCCACCATCCACTGACCATGAAGAGCGTGGTCAACCTCATCATCGCCCTGGACAGGATGAA
    AAGCATCAGCAGCTCCGAGTCGCTGCTGAGCACCGAGTTCAGGGATGAAAACCTGCTCAACATCATGTTGGAGACGGTGG
    TGGAAGGTAAAAAAGGGACCAGTTTCATCTAAACCGATTGTTTCTGAAGCTGAAGCTGTAAGCTAAAAGGACCCGATCTG
    TCACCCGCAGAGAAAATTGTGTTGGAGTGCTACTCAGCTCCTCCTCCACAAGACAAGTACAGCAGAAGAAGCGAGATCAG
    CTGCAGCGTGACCGACAGCGAGAAGAGGAGCCTGGTCAGGGTCCCCAACAGCATGGAGCTCCAAGCCGTCATGCTTCAGG
    GAGGCTCCGAATGCCGCAAAGGTACCTAGGATGGGGTTTCTTAAGGCAGCGCAGCCACCATGGCATCCAGCACTGAACAA
    ACTAGTATACACTGCGTGAAATTAACCAGTTTGTCTGCTCCCCCCCCCCCCCAGTTAACCTGACCATGTCCACCTATTTG
    GAACTTCAATCCAACCGTGAGGCCCAAACTGTGACGCTGGCCATCAGGAACACTAATTTCTACCTCTCCTGCCACAAGGA
    TGGTGATGAGCCGACCTTGCATCTGGAGGTAAAAACCACTGGTGGCTCATGTTAAATCGATCACCTTCCAGCAAAGATAG
    ACGCTCAAAAGACTGGTAGTTTCACAGGATCTGAATGAGCTTTATTAGGTGGAAACTTAGTGTTTTACTGTCTGCACACC
    AGACATTCAAATTGTACAAGTTGCCATGAATTAAATCTCCTTATGCTGATCTTTTCCTCTCGCAGGCAGTAGAAGACAAG
    GAGCAGCTGAAATCCATCAGCTCGGACAGCGACATGGTTCGATTTCTGTTCTACAAGCACGACAGTGGGGTGAACCTCTG
    CACCCTGGTGTCCGTCCCCTACAGCGACTGGTACATCAGCACGGCGGTGGAGGACAACAAGCCGGTGGAAATGTGTCTGG
    AGAGTGCCTTGCGGTACACCAGCTTCACCATCCAGCCCCTGAAGGGCAACCCCAGTTGCGAGGGAGAGATGTAAACCTCT
    TCACCACCTCTTCAGATCATGATGAAGTATGTACTAAGTACAGAAACTTGTGCAATGATGTCTTTGTCTAATGTCTCGAC
    AGAGTGGTATTATTGTTGTATCAGATGACCACGCCGGCGTTTATCATTTCTATTTATTGTGCAAAACTTATGGGTTGTTT
    GCTAAATTATTTACTATTTATGCATTTATTTATTTTGATTTTTACATTTGGAAATCTACTCTTAATCATTTCAAGGTTAT
    TTAAACTCAAAATTATAAAGTTGCATATTATTAAATAAA
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    		or


    >FM207486.1 Tetraodon nigroviridis Interleukin-1 family member
    ATGGACCAGAAGGTGGGTGACAAAACATCACCTCGACCACTGATACCGCTACGATTTTTTTGTGATTATTCATTATGTTT
    AGGACTCGAAGGTACAAGGAGGCTTGTTTATCACCCACAAGATCCATGAAGGGAAGCATCAGTACGAAGTGGAAAATGTG
    GTGAAGTGCAAAAGGGGAGTGCAGGGAAGTCGTTTGCCAGGTACAAGTCTGTCTGTCTGTCTGCCTGTCTATTAATCGAT
    CCATGTCTGTCTGTCTGTTGGTCCAATTGGTGGTTCTGTCGTGCTCTTAGGAGAGGAGATAAACTGATGCAGATTAACAG
    CACGAGCCTGCATGATGTGACACCTGAGGAGTTGGCACAAATGTTAACGGAGGAGAGTCCCAAACTGGTGGGTTCATGCG
    ACCCAGTGAAGTGTCTTTTAGTATTTGTGCTTTGCAGTGGTCTTCATCCCAGTCCCTACAAGGCCCACAATCCAGCAGCG
    TTCCTACCCGTGATCCCAGTTTCCTTTGTAAAAGCTGGGTAGGACGAAAAACCTGGCTGTGGGCCTTTCAGGACTGGATT
    TATGACCTCTACCAAATAGTTTAAACCCAGAACTTTTTGTGGTCATCATCCTCAGACAGTGTACAGGATGAAGGATGCCC
    CGAAAAATCCTTTCCAATCTGAGGACGTCCTCTACCCAGTTTCAAAGGAGTCCGTGCTCCTCAGGTTTCATATGGAGATG
    TGGCGGAAGGGAGACTTGGAGGAAAGCAAACCTGCCCCAAAGAACGGGTCAAGTGATAATGAGGGAATAAAGAAAAGCGG
    CTGCAAAACTGATGATGCCGAAAATGGTAAAAGGAGAGATCTTGTAGTTGTTTCCATGAAGAAAACCAGCATTGCTGTGG
    TCAGAGGAAGGGGCTGCACGAGTGAAGGATGCAGTGTGAACGAGGTTGTTCTGGTGGCGCAGTCCAGCAAAGTGACCCTT
    GGTGAGTACACGTTTCAATTTTAGCTAACTGTAGTTTGATTTACTGGTACCTTCCATTTTATTATGTTTTCTATAAGTAA
    TTTGATCCTACATGTTAGGACATTGTTAAAGAAGGGAATAAGTAAAATTTCATAAACAACATTCATTTTACAATTGACTT
    CTTCCTTATTTAATAAAATGCTTTTATTTGCAGAAAAAAAGGTACTAAATCTACTTGGGAAAAACTAGCCGAATGTATGT
    AGCAGATGTTTTAAGGCCAATGAACTACGCTTGACTTTCCTGCGTTTCAGTTTCAAGAGGAAGTGAAAGTTTCAAGCAGG
    AGAAATCCTCCAATGTTATGATCCAACATGTGGCCTCCCATTACTATCTCAGTCTCGTTTCGGAAAAGATCATTTCTGCA
    TCTCCGAATCCAGGTTCCGACCAATTCCAGAGTCACAGAAGCCACAACGAATCACTTCCACAATGATGAAGTATGTGTCA
    TCTCTCCCAACACCCAGAGAGAATTACAATCTACTCGTATAAGACAAACGAGGTGGAGCAGGGGCAGTACAGAGGCATGC
    CCGTGGTCCTGAACTTCACCGACTCCGACTGTTTCCTCAGGTGCTGCCAGGAAGACCAGCGCGTCTTTCTGCAGGCTGAA
    GTAAGTAGTCAGTTGAAGTAAGTTGCTGAGCAACAAAACCTGTCCTCCCTTCACTTTTCCACTGCTTTTGAGATTTGGCG
    ACGCCTGCGGGCTACAGATGGCAAGAAGGGAATTCTTTTATTTCCACACCCTGGGTATTTTTTTCCCAGTCCCAACAGTG
    CAGACATGTTTAGAAATTTGTAAATGGATCCAAAATGAAGGTTTTAGAGTATGAATCGTTATATTTAAATACAATTCTAA
    TGTGAACGATTATTTAACAATTACAGGGACAATGAATGCCAATTTTAAGTTAAGATTTGAAAATGATTTGGCAGAAACTT
    TTTCAAGTACTTAGTAAAAAAAAAAATGCATTTTTCACCGGTTTACATCATTAATCGTCTGTGTGGAGTGAATCTCTCCA
    TCAGTCACCATAGCGAATTGAATAATATTTGATAGTGACTTTTCTAACAATGGCAGACTTGTCTTTTTGAAGGGGTGTGA
    TAAGAGGAGACTGAGGCAGATTTCCAAGAGTGACGAAAGCGCCCTCTCCTTCGTCTTCTACATGAAGGCTGACCTTAGCA
    AGCAGCGAACGTTTGAATCGGCCCTGCACCCGGGATGGTTCATTCGTGTCGAGGAAAGCGACCAGGTGGGGATGGCACAC
    CTGGAGAGAGAGGAGGAAGAGTACTCCTTCCTCTTTGTCATTCAGAAATGATGGAGATTCTGTTTTCTTTGATTCTCAAG
    GAAATTTGAGAAATACTATTCAAAACAAAGAACAAAACAAAACCTACTTTAACCATATAAATTCTGCTATTGTAGAAGTA
    CGTAGATATGCATCATATTGTCCAGTATACACTGTAACATTCTGATACATGTGTTCATTATTGTTTAAAGATGCTCATGA
    TTGATTTGAATAAATAAA
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    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


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