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IL-I (Interleukin-I)

Organism
Salmo salar (Atlantic salmon)
Phylogeny
Synteny
Paralogs
Sequencing Methods
Il-1b: Sanger sequencing
Citations
  • Lindenstrom T., Sigh J., Dalgaard MB., Buchmann K. (2006). Skin expression of IL-1beta in East Atlantic salmon, Salmo salar L., highly susceptible to Gyrodactylus salaris infection is enhanced compared to a low susceptibility Baltic stock. Journal of Fish Diseases 29(2):123-128. doi:10.1111/j.1365-2761.2006.00696.x.
  • Angosto D., Montero J., López-Muñoz A., Alcaraz-Pérez F., Bird S., Sarropoulou E., Abellán E., Meseguer J., Sepulcre MP., Mulero V. (2013). Identification and functional characterization of a new IL-1 family member, IL-1Fm2, in most evolutionarily advanced fish. Innate immunity. doi:10.1177/1753425913501011.
  • Data input by Mara Iliopoulou
    		•
    Sequence
    >NM_001123582.1 Salmo salar Interleukin-1b
    GGATTCACAAGAACTAAGGACTGAATACAAGACACTGTTACCTACCTACAAACTACAAAACAACTCAAGATCTAACTATA
    CAGACATGGAATTTGAGTCAAACTACAGTTTAATAAAGAACACCTCTGAAAGTAAGGCATGGAGCTCCAAGCTGCCTCAG
    GGTCTGGATCTGGAGGTATCCCATCACCCCATCACCATGCGTCACATTGCCAACCTCATCATCGCCATGGAGAGGTTAAA
    GGGTGGCGAGGGGGTTACCATGGGAACCGAGTTCAAGGACAAGGACCTGCTCAACTTCTTGCTGGAGAGTGCTGTGGAAG
    AACATATAGTGTTGGAGTTGGAGTCGGCGCCCCCTACGAGCAGGAGGGAAGCAGGGTTCAGCAGTACATCACAGTACGAG
    TGTAGCGTCACTGACTCTGAGAACAAGTGCTGGGTCCTGATGAGTGAGGCTATGGAGCTGCACGCCATGATGCTCCAGGG
    AGGCAGCGGCTACCACAAAGTGCATTTGAACCTGTCTACGTACGTCACGCCCGTCCCCATTGAGACTAAAGCCAGACCTG
    TAGCCCTAGGCATAAAGGGATCCAACCTCTACCTGTCCTGCTCCAAATCGGGAGGCAGGCCAACCCTGCACCTAGAGGAG
    GTTGCAAACAAAGAGCAGCTGAAGTCCATCAGCCAGCAGAGCGACATGGTGCGTTTCCTTTTCTACAGACGGAACACCGG
    GGTTGACATCAGTACCCTGGAGTCTGCCGGGTTCAGGAACTGGTTCATCAGCACGGACATGCAGCAGGACAACACCAAAC
    CGGTGGACATGTGTCAGAAGGCAGCCCCCAACCGCCTCACCACCTTCACCATCCAGCGCCACAACTAAG
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    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


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