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otx2 (Homeobox Protein otx2)

Organism
Sparus aurata (Gilthead sea bream)
Phylogeny
Paralogs
otx2-a,
otx2-a
otx2-b
otx-b
Sequencing Methods
otx2-a: Illumina sequencing

otx2-b: Illumina sequencing
Citations
  • Heather D. Veilleux, Lynne Van Herwerden, Nicholas J. Cole, Emily K. Don, Christian De Santis, Danielle L. Dixson, Amelia S. Wenger, Philip L. Munday. (2013). Biology Open 2:907-915. doi:10.1242/​bio.20135496.
    		•
    Sequence >TR91611|c5_g2_i3 Sparus aurata otx2-a
    ATGATGTCCTATCTGAAGCAGCCGCCGTACACGGTGAACGGACTGAGCTTATCTACCTCAGGAGTGGACCTGCTGCACCC
    GTCAGTGGGGTACCAAGGGACTCCTCGCAAACAGAGGAGAGAGAGGACGACGTTCACTCGGGCCCAGCTCGACGTGCTGG
    AGAACCTGTTCGGCAAGACTCGGTACCCGGATATCTTCATGAGAGAGGAGGTGGCCTTAAAGATCAACCTGCCTGAATCC
    AGAGTGCAGGTCTGGTTCAAGAACCGACGAGCCAAACACCGCCAGCAGGCCCAGCAGACCCAGAGCGGGGTGCAGAACAA
    GGCTGTCAGCAAGCCGATGAAGAAGAAAGGCTCTCCGGTGAGAGAGGCCAGCTCAGAGAGCGGGGCCAGCGGCCAGTTCA
    CGCCGCCTTCGGGCACCTCGCTCCCGGCTGTGAGCAGCAGCAGCAGCGGCAGCGCGGCGCCGGTGTCTATCTGGAGCCCG
    GCCTCCATCTCCCCGCTGTCGGACCCGCTGTCCACCTCCTCCTCCTCCTGCATGCAGCGCTCCTACCCGATGACCTACAG
    CCAGGCGCCGGGCTACAACCAGGGCTACACGGGCTCCTCGTCCTACTTCACCGGGATGGACTGCGGCTCCTACCTTTCGC
    CTATGCACCACCAGCTCTCCGCCGCGGGCTCCGCCATGAGCCCCATGGGCAGCAACGGGGTGTCCAGCCACCTGAGCCCC
    GCGTCTTCCCTCTCCTCGTCGGCGTACGGGGCGGCGGGTCTGGGCTTCAGCGGCGCCGCGGACTGCCTGGACTATAAGGA
    GCAGACAGCCTCCTCATGGAAGCTCAACTTCAACGCGGACTGTTTGGATTACAAAGACCAGGCAGCGTGGAAGTTTCAAG
    TGTTGTGA
    Send to
    		or

    >TR90041|c1_g1_i3 Sparus aurata otx2-b
    ATGATGTCGTATCTAAAGCAACCACCTTACACAGTCAATGGCCTCAGCTTAACCACTTCCGGAATGGATCTTTTGCATCC
    ATCAGTGGGCTATCCAGCAACCCCACGGAAACAGAGGCGAGAGAGAACTACTTTTACCCGCGCACAGCTCGACGTTTTGG
    AGGCGTTGTTCGCCAAAACTCGGTACCCGGACATATTCATGCGCGAGGAGGTGGCGCTGAAAATCAATCTACCCGAGTCC
    CGAGTACAGGTTTGGTTCAAGAACCGGCGGGCAAAGTGTCGCCAGCAGCAGCAGCAGCAGCAGAACGGGGGCCAGAACAA
    GGTGCGACCTGCCAAAAAGAAAAGTTCCCCGACCAGAGAAGTGAGCTCAGAGAGCGGGGCCAGCGGACAGTTCACGCCCC
    CCACCAGCACCACCACAGTCCCCGTCATCTCCACCAGCACCGCCCCAGTGTCCATCTGGAGCCCGGCGTCCATCTCTCCG
    CTCTCGGACCCCCTGTCTACCTCCTCCTCCTGCATGCAGAGGTCCTACCCGATGACCTACACCCAGGCCTCCAGCTACAG
    CCAGGGCTACGCCGGCTCGACGTCATACTTCGGCGGCATGGACTGCGGCTCTTACCTCACCCCCATGCACCACCAGTTGT
    CAGGCCCCGGCTCGACTATCAGCCCCATGAGCACGAACGCGGTCACAAGCCATCTGAACCAGTCCCCGGCGTCCCTCTCC
    ACCCAGGGCTACGGGACGTCCAGCCTGGGCTTCAACTCCACAGCAGACTGCTTGGATTATAAGGACCAAGCGGCGTCGTG
    GAAGCTGAACTTCAATGCCGATTGCTTGGATTATAAGGATCAAACTTCCTCGTGGAAATTCCAGGTCCTGTGA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou E.Sarropoulou
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