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GAPDH (Glyceraldehyde-3-phospate dehydrogenase)

Organism
Oplegnathus fasciatus (Barred knifejaw)
GO term(s)
Molecular Function: GO:0004365
Cellular Component: GO:0097452
Biological Process: n/a
Gene Expression
GAPDH-1

Tissue distribution of Oplegnathus fasciatus GAPDH-1 mRNA isoform based on the real-time RT-PCR analysis.


GAPDH-2

Tissue distribution of Oplegnathus fasciatus GAPDH-2 mRNA isoform based on the real-time RT-PCR analysis.


Phylogeny
Paralogs
GAPDH-1,
EU828449.1
GAPDH-2
EU828450
Sequencing Methods
GAPDH-1: Sanger sequencing

GAPDH-2: Sanger sequencing
Citations
  • Cho YS., Lee SY., Kim KH., Nam YK. (2008). Differential modulations of two glyceraldehyde 3-phosphate dehydrogenase mRNAs in response to bacterial and viral challenges in a marine teleost Oplegnathus fasciatus (Perciformes). Fish Shellfish Immunology 25(5):472-6. doi: 10.1016/j.fsi.2008.07.007.
    • Sequence >EU828449 Oplegnathus fasciatus Glyceraldehyde-3-phospate dehydrogenase-1
    ATGGTTAAAGTTGGTGTCAATGGATTCGGCCGCATCGGTCGTCTGGTGACCCGTGCTGCTTTCACCTCCAAGAAGGTGGA
    GATTGTGGCCATCAATGACCCTTTCATCGACCTGGAGTACATGGTCTACATGTTCAAGTATGACTCCACCCACGGCCGCT
    TCAAGGGTGAGGTGAAGATGGAGGGTGACAAGCTGGTCATCGATGGACACAAAATCACCGTTTTCCACGAGAGGGACCCT
    GCTAACATCAAATGGGGTGATGCTGGTGCCCAGTACGTGGTGGAGTCCACTGGTGTGTTCACCACCATCGAGAAGGCCTC
    TGCTCACTTGAAGGGTGGTGCCAAGAGAGTCATCATCTCTGCACCCAGCGCTGACGCTCCCATGTTCGTCATGGGTGTCA
    ACCACGAGAAGTACGACAAGTCCCTCCCAGTTGTCAGCAACGCTTCCTGCACAACCAACTGCCTGGCCCCCCTGGCCAAG
    GTCATCCATGACAACTTCGGCATTGTTGAGGGCCTGATGAGCACAGTTCATGCCATCACTGCCACCCAGAAGACTGTTGA
    CGGTCCCTCCGGCAAGCTGTGGAGGGACGGCCGCGGTGCCAGCCAGAACATCATCCCCGCTTCCACCGGTGCTGCCAAAG
    CTGTTGGCAAGGTCATCCCTGAGCTCAACGGCAAGCTGACCGGCATGGCCTTCCGTGTCCCCACCCCCAACGTGTCAGTG
    GTTGACCTGACAGTCCGTTTGCAGAAACCTGCCAAATACGACGACATCAAGAAGGTTGTGAAGGCTGCAGCTGAAGGACC
    CATGAAGGGCATTCTGGGATACACAGAGCACCAGGTCGTCTCCACAGACTTCAACGGCGACTGCCACTCCTCCATCTTTG
    ATGCTGGTGCTGGCATCGCCCTCAACGAACACTTCGTCAAGCTGGTCTCATGGTACGACAACGAGTTCGGCTACAGCAAC
    CGTGTCTGCGACCTGATGGCCCACATGGCTGCCAAGGAGTA
    Send to
    		or

    >EU828450 Oplegnathus fasciatus Glyceraldehyde-3-phospate dehydrogenase-2
    ATGTCAGACCTCTGTGTTGGAATCAATGGATTCGGTCGTATTGGCCGTCTGGTCTTGAGGGCTTGCCTTCAGAAAGGCAT
    CAAGGTTGTGGCCATCAATGACCCCTTCATTGACTTGCAGTACATGGTCTACATGTTCAAGTATGACTCCACCCACGGCC
    GTTACCATGGTGAGGTCTCCCAAGAGGATGGCAAGCTCGTCGTCGATGGCAACGCCATCTCTGTCTTCCAGTGTATGAAG
    CCAGCAGAGATCCCCTGGGGCAGTGCTGGAGCCAAGTACGTTGTCGAGTCCACTGGAGTCTTCCTCAGTGTGGAGAAAGC
    CTCTTCTCACCTCCAGGGCGGTGCTCAGCGTGTGGTTGTGTCTGCCCCATCACCTGATGCTCCAATGTTTGTCATGGGAG
    TTAACGAGGACAAATACGACCCCTCCTCCATGACCATCGTCAGCAATGCCTCCTGCACCACCAACTGCCTGGCCCCCCTG
    GCCAAAGTCATCCATGATAACTTTGGCATTGAGGAGGCTCTCATGACTACAGTCCATGCATACACAGCCACCCAGAAGAC
    AGTGGACGGTCCCAGTGCCAAGGCCTGGCGTGATGGCCGCGGTGCCCACCAGAACATCATTCCAGCCTCCACTGGTGCCG
    CCAAGGCAGTGGGCAAAGTCATCCCCGAACTCAACGGTAAGCTGACAGGCATGGCGTTCAGGGTGCCAGTTGCTGATGTG
    TCAGTGGTGGACCTGACATGCCGTCTGTCCAAGCCTGCATCTTACGCTGAGATTAAGGAAGCCTGCAAGAAGGCCGCACA
    TGGGCCCATGAAGGGAGTGCTGGGTTACACCGAGGACCAGGTGGTGTCCTCTGACTTCATCGGTGACACCCACTCCTCCA
    TCTTTGATGCTGGCGCTGGCATCTCCCTCAACGACAACTTTGTCAAGCTTATTTCCTGGTATGATAATGAGTTCGGCTAC
    AGCCACCGTGTCGCTGACCTGCTGTTGTACATGCACTCCAAGGAGTA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou
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