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FABP2 or IFABP (Fatty acid binding protein 2 or Intestinal fatty acid binding protein)

Organism
Oreochromis niloticus (Tilapia)
GO term(s)
Molecular Function: GO: 0005215, GO: 0008289
Biological Process: GO: 0006810
Phylogeny
Genomic Map Locations
fabp2a
LG6

fabp2b
LG3
Paralogs
Sequencing Methods
fabp2a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167490.1) annotated using gene prediction method: Gnomon, supported by EST evidence.

fabp2b: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167465.2) annotated using gene prediction method: Gnomon, supported by EST evidence.
Citations
  • Kaitetzidou,E., Chatzifotis,S., Antonopoulou,E. and Sarropoulou E. (2015). Identification, Phylogeny, and Function of fabp2 Paralogs in Two Non-Model Teleost Fish Species. Marine Biotechnology, 17(5), 663-677
    • Sequence >XM_003452249.2 Oreochromis niloticus fabp2a
    GAGATAGGAGGGTGTGTGGTTTAAAAGGAGCGGCAGAGTTTGAAAAGGGCACTCCTTGCTGCAGAGTCCTCCAGCTCACC
    TCACCGCCACCATGACTTTCAACGGCACTTGGAAAGTTACTCGAAATGAGAACTATGACAAATTCATGGAAAAAATGGGA
    GTTAACATGGTGAAGAGGAAGCTGGCTGCTCACGACAACCTCAAGATTACCATCACGCAGGAGGGAGACAAGTTTAACGT
    CAAGGAGAGCAGCACTTTCCGAAGCATCGAAATTGACTTTACTCTCGGAGTTACCTTTGAGTACGCCCTTGCAGACGGAA
    CAGAACTATCAGGTGCGTGGACCTTGGAGGGAGACACGTTGAAGGGAATTTTCAAGAGAAAGGACAACGGAAAAGAGCTG
    ACGACAACCAGAATAGTTCAAGGAGATGAACTCATACAGAGTTACAGCTACGAAGGTGTGGATGCAAAGAGGATTTTCAA
    GAGGAGTTAGACCAAATCCATCTAAAGAACCGAAGTGAAATATTTTCAGGGTTGCATACAGTTTTGTGTCAAGTCATCAA
    CAACATGTAATTCATCATATTTTGATAGCTGCATTAATAAAGTCACAACTGCCTATTAA
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    >XM_003450322.3 Oreochromis niloticus fabp2b
    GCGTATCCTTGAGGTCGTGCAGCTATCGGCCTACATTTGACACCGTCTTTAAATGGCCACATCAGCAGACAGATAATCAG
    TGAGATAAAGAACAGCATCTTCCATGCCAGCTCAAGGAGGGGTGGATGTGTATAAATTGAGGCCTTTGGGGAATCACAAT
    CTCACGGTCTGCTGTAGCGCTTCATCATCAGCTGCCTTCAACCCGACGAGCCTGCAGCCATGGCCTTTAATGGAACCTGG
    AAGGTCGACCGCAGTGAGAACTATGTCAAGTTCATGGAGCAAATGGGTGTTAATCTTGTAAAACGTAAGGTGGCAGAGCA
    CGACAACCTGAAGATCACCATCGAGCAGAACGGGGACAAGTTTCACGTCAAAGAGTCCAGCACTTTACGCACCAAAGAGA
    TTGACTTCACTCTGGGCGTTCCATTCGACTACACCCTGGCTGATGGCACTGAAGTCTCAGGTGCATGGGAGATGGAGGGG
    GACATGATGAAAGGCAAATTCACCAGGAAAGACAACAACAAGCTCCTGACCACTACTAGAACTCTGGTGGGCGGAGAGCT
    CGTGCAGAGCTACAACTATGAAGGGGTGGATGCCAAGAGGATTTTCAAGAAGCAGTAACCTGGATATTGAAGTTCAAGTT
    GTATTTTTATATAAATCACACAGCCCAGTGAACTGTATCTGAAGTTATTGTTGGCATTTAGCTTATTTCAGAAGAAGGAT
    CATAGTCCCCACGTTCATGAAACAACAGCTAGAAAAACACTGAAATGGTCACACAGCTCAGGTAAATTTGCATCCCTTTT
    CCTATGAAAGGAGAAAACAAACACTAAACAGCATCCTGGCAGTGGATGTCTATCTGTAGCAGTAGCTAAACATTCAAATG
    GGTTTAGTTTTATTTGTCTTGGAGGTGTTCAGGATAATCCGCACATCATAGTGTCAACAAATTTCACAGGACTCCTTCAT
    TGGTATGGTGTAGATTATCCACAGTAATGGGTGTTTTCAGGTAAAGCTCCACGGCAACATGAAATACATGAAATGCTATT
    GTGTGTGTTCAAACAGGGAAATAAATCAATAAATCAAATTGCACTAATGGTTCTCATGTATCAGATTGTCCTCTACAATA
    AAGCATGTTATGTCACTTGA
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    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by Elisavet Kaitetzidou
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