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Sox 19 (SRY (sex determining region Y)-box 19)

Organism
Takifugu rubripes (Pufferfish)
Paralogs
Citations
  • Koopman P., Schepers G., Brenner S., Venkatesh B.(2004). Origin and diversity of the SOX transcription factor gene family:genome-wide analysis in Fugu rubripes. Gene 328:177-186. doi:10.1016/j.gene.2003.12.008.
  • Data input by Mara Iliopoulou
    		•
    Sequence
    >AY277954.1 Takifugu rubripes Sox 19
    GAGCTCCATCACTTCCAGGGCTGCTTCACACGCACCAAGACGGGAACTGTCGCTTGAAATTGGAGGATTGTAACGACGGC
    TACCTTCAGATTTATCATTACCGACATCAGGGGGACGAACGTGTGTTTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGAGT
    GTGTTTTACGCGCTGAGTAACCGATCCGCTGAAGTCACTAACGGGACGGTGCGCGCTTCGTCTTTCACTCCAAACTGCGC
    ATCTGGCCAACATGTACAGCATGATGGAACACGAGATGAAGCCGAGCGGCCAGCCCCCTCCTCAGACCCCTCACCGAATG
    TCCCCGGTGGTGACCGGGAGCGTGGATAACGGCGGCGGCTCTCTGCCGAGCCCCAAAGGCGCGTACGCGCAGGGCGACCC
    CATGGATAAAGTCAAGCGACCCATGAACGCGTTCATGGTGTGGTCCAGGGGCCAGCGGCGTAAGATGGCCCAGGAGAACC
    CCAAAATGCACAACTCGGAGATCAGCAAGCGCCTGGGAGCCGAGTGGAAACTACTGAACGACGCGGAGAAGCGGCCCTTC
    ATCGAAAAGGCAAAGCGCCTCCGGGCGGTGCACATGAAGGAGTACCCCGACTACAAATACAAGCCCCGCCGCAAGACCAA
    GCCCCTGCTCAAAAAGGACCCCCAGGTGGCCAAATACCCCCTGTCCACCGGGAACTTGCTGGCGGTAGCGCAGGGCCAGA
    GCGGGAGCCCGAGGATGGAGAGTTACGGCTGGAGCCCCAGCGGGGGGTATCCCGGCATGCAAGGCGACACGCTGGGGTAC
    AGCCAGCAGCTGCACCGGTACGACCTGTCACCCCTCCAGTACCCGAGCAAGATGAGTGCAGCTCAGCCCTACATGAACGG
    AGCCAACTCCTACAGGTGAGCCGCAGGACCACAGAGCTCCGGACACAGCTGGTAGCCAGGAGAACCCCGAGCAGGACTCA
    AAACTGGATCCAAAAGCGTTTCAATGACGCTGCTTCTAAAAGTGTAGCTGTGGAAAAATGGACTTTCCCCAACTGTTTAA
    GGAAGAGTTAAGAGAGTCCATAACTCAGCAACAGGTGACCAGCTGCTCTCAGACCAGCTTTATGCGTTCGATGCGCCAGC
    TGATGAGGATCGAGGCTGGTCTGGAGTCAGTTTTAGGGGTTTGTTTCATCTGGCTCAGTTTCAGGGTTGATTTTAAAGCA
    AACTCCAGACGAAAAGTTGTTTTTTTAAATCCACTTGTGCAGCGTTCGCATGTCTGCGTTACACCAGTGCAGGTGGAGGC
    GTTCGTAAAATCCAAGAAAAACCTGGAAATAGTAACCATAAATTGAAATTATTTGGTTTTTTAAATGTATCTGTTGCTAT
    GCGCCTGATTTGATTAGCACTTTGTCCAAACGTCTGGACACTATAAAGCTTTAACTATTCTAATTTTTTGAATCTGGCAA
    GAACCCGATGGTGCGGCCGAAAGTGCAAAAGTCTTCAACACACAAGAGAATTCAAACTTTGATGAAATGCCTGTAATTAA
    AATGCTGCAGCTTGACTCAGGCGTGTTCCTCAGCTGAGGTCGCTCTCGCTGTAGCTCCTCGCCAACACAAACCAGCCTCA
    TTTAAACAACCTTCTGCCTGGTAGAACTGGTGAACAGTCAGAACCGGGTCAGCCAGCTCAATAAGTCCATTGAGCTGCAG
    CTTCTCCATCCAACTGCTCCATAAATCTGGCAACATGAGCATAAAGATTCCAGCTGTGAGGAGATATTCCCAGATGATCG
    TTAACCTTATTTCTCTGTTTGTGAAATAAAAGTTTCCATTGTTAGTGCCAGTTAACCTGGAAAAAACATGCCACGGTTCT
    GACAGAGAACGTTCAGCCAGCAGAGATCCCAGAGAACCTGGAGCTCTCTGTTGGGTTTGGGTGAGTAATTGATCTGAGGT
    GATCTCTGATCCTGGTCTTTTCTCTTTCATCCGCAGCCCCATGTCGTACGGCAGCAGCCCTCAGCAGCCCCCCCCTGTCA
    CCATGTCCATGGTGAAAGCGGAACCAGTATCCCAGTCCCCCCCACAGGCACCTGAACAACACCGTGGGCCTCTGCAGGGT
    GACCTCAGGGACATGATCAGCATGTACATCCCAGGACCTGGAGGGGAGGCCGCCGACCCCGCGGCGGCCCAGAGGGGCTA
    CACCAGCGTCCAGCAGCACTACCTGGGCACCGTCCCTCTCACTCACATGTAGAACTGGCGTCTGGTCAGTCAACCGGGAG
    GACGGGGAACACGCCAGGAATCGGTTCCGTCAAGCTCTCGAACTTTTCTGTGTCTAGGACTGTTTTCAGAAGGTCTCGTT
    CCTCTTCATCCACCCCGAGGAAACTCAGACTCCACCTGAAGGCTCTGTGGGGTTCCCGTCCTGTTAGAGTTCTGGGTTCA
    CCTCCACAGAACCAGACTGGGCCGGCGGATGATCCACCTCCTCCGGGACCGGCAGACGACCCGCTGGAAATCTCAGGAGC
    TGATGACGAATAGGCTGAAGAACGGTGTGAACATCTCGCTGAGAAGAAACACACGTCAATGACCCGTCAGCTTTTGTTGT
    GTTCTACTGTTTCTGTGTTTTCCCTGATCACATGATGGATGGCGCCTCCTGCTGGAACATCAGCCCCAGAATCCCATTAG
    CCAGCTGTGGAAACACCTCCACCAGGCTGGTCCACACATGATCTGTTAACTGTACGCCCGATTAACATGTCCTCTCCTCC
    TTTCATTAAACTGTCAGCTTTAGCCTGAATTCCTTTAGGTTCACGAAAGAACCAGAACAATCCAAACCCAGTGTGGGACT
    GGTTCAGGAGTCGTTCTCCTGCTTTTCTCATGTGTAAATATTCCAGGTGTTTTTCTGATGGTAGAGTCTTAGTGTGTTCA
    TGGAATGATGATTTGTTCTTACTAGCAGGAAATGTTGTAAATACTTCAATGTACTTTCTTATTAAAGCATTAGAGACCCT
    CCACTTGTTTCTCCTCATTCCAGTTCTGGTCATGTATCTCCACAGTGGAGCCAACCTCTCACCCTCCTGCTGCTGCTTTT
    AATGGTTTCCTTCAGTGCTTGAGACAGATGTGGAGTGAAGCAGCAACAGAGGAACCCTGAACCAGATGATTCAGCAGTAG
    AAAAGCAAGAACTAGAGGGTGTTTGGTGGTGATGATGGTGGATCCATCTGGAGGAACATCTCCTTTTCGGGGAGTCTGGA
    TAAATAAATGAAGACATCCCATTATCTTCTTCTTCCGCAGCTGGTTTCTCCAAAGGAGGAGAAAGTCTTCAGCCATGAGT
    GGCTCCACACGAATGTGGAGATTTCCCCTAAAGAAGAAGAGCAGAGGAGATGTCTGACCCCGTGAAACCCATCGGAGCAG
    CTCCTCCGGTGGTACCGAGGTGGAGAGCTGAACGCCTCCGAGGCTCATGGGAGAAAACGGGGCAGCAGGCTGGGTGCAGC
    CAAGCGTTGAATGATTTAAGGTTTGATTATTTAGGTTTTACCCTCTTTAAAATTCACTTTCCCCACCCATGGTGGTTTCC
    AGCCCCCTCCCCTCCCCCACACAGAGAAAGTGGGTTGATGACCCATTTGTAATTGGCCGTGTCGGAGGTGCTTTGTGCGA
    TCTTTTCAGGCTGCAGGTGCATCTAGTAAAAGTTGGAGTCTCTGCTCCTCCCCTGGGCGTCTTTGTTCCCGCTTCCCCGC
    TTCTTCCCCCACCCCCCCACTGGGCAGAAAATTAGGCCTGTTTTCGGGGACTTGCTCGTCAGGCTTAACCCTTTCACAAA
    CCGCTGCCTTTCTCATGTAAATGGCGGAGAACCTCGCATCGGCTAATCCGATACTGAGAAGAGGGGGGGGGGTTGTGGGG
    GAGGGGGGATGGCACGATCAATCACTCAATCAAAGGAAGAAAGGGACAGGAGCGGGCTCGGAAGTGTCCCAGCTCCAGTT
    GGATCTGGTGGCCTTTCCTCACGGGGATCCAGTGGGAGCATGAAGATCCCATCTTCTCCAAACGGCTCCGCTGGAAACAG
    CGAAAGCAGAACGGGTCCAGTTTAAACCAGCTGCGGTGCTGCTGGTTTCAGTGCTGGAGCTGGTGGAAGCAGAGAGCGAG
    CTGCAGAAGAAGCAGAGTCCATGCATACATTTGGGTTGTTCAGACACCGTCCTGGGTGGGTTGGGACTGGGAGAGGAACT
    GATAGAGAGGGGTCTCCAGGATTTTTTTGCTCCAGTACATCCCATCCCTTAGCAACGGGCAGTGAGGCTTCAATAAGTGG
    TTGCCATGGCGGTGCTGAGAGCGAGCCTCCACAAAGAGCCGCGGTCAGCCTGAAAGAGTCGGGGGAAGATTCCTGACACA
    CAAAAAAATTAAAATAAAATCAGCGAAAACAACTTTGGTTTGCCTTGAAAGCATTTATACCGGTCCGATTAAACAACACT
    TTCACTTCACCTCGACTGCAGTTTTAGTTTTAAATGGAGAAAAAGTGAGTTCGCACTTTAATTCCGACCGACACGGCTGT
    CGGTGGGGTTAAAAACAAAGGTGGACTTCAACGTGTGAATATTAAACATCTCCCAGGATTTTATTTTTTTAATTTTACTT
    AATTGATAACCTGTAAAGTTCTGCTGCCTCTCACACAAATGTCCTTTTTTTGATTAATAATTTGTTATATTTATTACTGC
    AGAAACATCAGAATGCTTTAGTTCCAAAAATTCCCCTGTGTAGAGGATTGTGGGGTTTTCTAAGTTAGACTAAGAAATCC
    CAACTTCTGAGGACAGTGTGGTGTGTTTGAGGGAACAGAGTATTTCTATCTGAGTGGGGATGGACTCAGGGTGTTCTCCT
    GTGTTGGTCCGTATCTCTGATCCAAGATCAGCTTCCGAACCACGGTCCAGATAATGGCAGCACAGAAGAATATCCAAAAG
    TTCTGAATGGCAAGATCAGTGGCTGAAAAGATCAGTGGCTGAGAGAGGTCAGAGGTCAGAGACAACAGAGGCAGACCCCA
    GGAGACCCACCACTGAACCCTCAACCACCCTCACGCAGCATTTAAAGGCTTTCACATCATACTTACAGTCTAAAGGGTCT
    TAAAAAAACATAAAAACTTTCTCCCCCCCAGCTGAACCACCGTTATTTTATTCCCTGTGCTTTTATTACTCCATTGTGAC
    TGTAAGGCAGCAGAGTGCCCCTGTAAATGGCCCGGGAACCCCCCATCACATACACACATACAGAAGTCATATGATACACC
    TCACTGTTTCATTTTAGATCTTGTTCCACAGCTGGGGGGTTACTGAATGGGAGCAGGCTGGTTTGGCACCAGTTGCGCAC
    CACCAAGGTGAATCAGAGGCTACTACGACCACTGACCTCAAGGGGGCGCTATAGGGCGACGCCACACCCAGAACAGTCAA
    TAAACCTTCACATTTGTGACGGGTTGGACCTCCCTGTGTGTCCACTAGAGGGCGATGTTTGATTACTGAAGAAAACACAC
    AAACACTCCCGTGAACAAGAACGTCACAACTATTTTCTACAAAAAAGTGAAAACAGACAGAATTGTCTCCAAATAAAAGA
    TAAAACCTGAATGAAAATGTACCTGATTTTTTCAGAACTTTGCATATTTTTTCTGTTTGTTTCCAGATATGACTAATAAA
    TATTGCAAGTCATTTCTTGCCCCTTTCCACTGGGCGTTTTCAAGTTCAGATAGAATGTCATTTGAAGATCATCTACTTAT
    TTTTCCCGACCAACATTCAATCCAGCTTCATTTATAAAAGATATACAATTTCTCAGAGGCCTCCTGATGCGGTTTGGTTA
    AGCTTCTGCAAGAACAAGGGATGGAACCAACAGCCACTGTTCAGAGGAGCAGGTTTACGAGCCTTCGTCCTTAGAGACAT
    GCTGGACCGGTAGAGATGGTTTGTGTGGTTGTGGAGGGTTGCATCACACTTGCACAGATAATGTGACCTTCTTACCGTGC
    TCGGGTCTCTGATTCTGCGGCAGTGTGACGGAACAGCCCTGCAGCTGTTTCCCTTGAGCTGGGTTATATTTAATACAGGT
    CACACTGGGCGCTGCTGGGAGTCAGCTCCAGTATGAGAATGCTCTCTCAGAGGCTCAATCAGCTCAGAAGCTGGTCAAGT
    GTTTGATCTTTGCCCTCAGATCATCAACTGTAATGCAGGAAACTTCAGCATGAATCCACAACAAGACCAGTACAGGAAGG
    AACCTTGGGGTGGACCCAAAACTGGAGCCCAAACTGGAGCTC
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    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

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    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

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