Home BLAST Help About  

ABCF2 (atp-binding cassette sub-family f member 2)

Organism
Piaractus mesopotamicus (Pacu)
Gene Expression
Sequences were obtained from the de novo Piaractus mesopotamicus transcriptome. The database was generated by sequencing fast and slow skeletal muscle from 5 individual animals using Illumin Hiseq2500 platform. Over 665,000,000 paired-end reads were assembled using Trinity. The transcriptome showed an average coverage >40x. 

Phylogeny
Paralogs
ABCF2a,
ABCF2b
Citations
    Sequence
    gacgatctgtgttccgttagcgcagcgaggagaagagaaaaagttgccatgccgtccgatttagcaaaaaagaaagcggc
    gaagaagaaagaagcagccaaggcccgtcaacggcccaagaaagctgaagaagttaatggcgaggcagagaaacccgaga
    gccaggagaatggtgcggctgaggtgaacggagttgccagtctcactaaggagctggatgagtttgagttgaagaaaacg
    gaggcacgtgctgtgacaggggtgctcgcctcccaccccaacagcacagatgtgcacatcagcagtttatcactgacctt
    ccatgggcaggagctgctcagcgacacctgtctggaactcaactcgggccgccgctatggccttattggactcaatggaa
    caggtaaatccatgttgctgtcggccattggtcacagggaggtgcccattccagaacacattgacatttaccacctgacg
    cgtgagatgccccccagtgagaagacagcactgcagtgtgtcatggaggttgatgaggaaagaatccagctagagagaga
    ggctgagaggctcgcccatgaagactctgaatgtgagaagctaatggagctgtatgaacggttagaggaactggatgcag
    acaaagcagagatgcgtgcatcccgtatcctccatggtctgggcttttccaccaccatgcagcagaagaagcttaaagac
    ttcagtggtggctggaggatgcgtgttgctcttgccagagccctgttcctcaaacccttcatgctgctccttgatgagcc
    cacaaaccacctggaccttgatgcctgtgtgtggctggaggaggagctgaaggaattcaaacgaattctggtcttgatat
    ctcattctcaagatttcctcaatggtgtttgtactaacatcatccatctgcaccagcgcaagctgaaatactacacagta
    agaatagcgatttcctctctagttgtgcaggctcttggtttaggc

    Send to
    or


    tctgtggccatgccctcagaccttgctaagaagaaggctgcaaagaagaaggaggcagccaaagctcgtcagcgtgtcaa
    aaagcatgaggaggtgagcgtggaggcagagcaaccggaggaaaatggagtggttccaaatggggaggcagacggagacg
    ttactgccttggctaaagagctggatgagtttgagttgcgtaagatggaagctcgagcagtcacaggcgtcttggcatcc
    cacccaaacagtacagatgttcacatcagcagtctttcacttacgttccatggccaggagctgctgagtgacacaagcct
    ggagctgaactcaggcagacgctacggtctcattggcctcaatggcacaggaaaatccatgctcctgtctgctattgccc
    atcgagaggttcccatcccagagcacatagacatctatcatctgacacgtgagatggctcccagtgagaagacagcattg
    cagtgtgtcatggaggttgacgaggagaggatcaaactggagaaggaagcagagagactagcccacgaggactcagagtg
    tgagaaactgatggagatttatgagcgtttggaggaactggacgcagataaagctgaagttcgagcctcgcggattctgt
    ttggtttgggcttcactccagccatgcagcgcaaaaagctaaaagacttcagtggtggctggagaatgcgtgtctcgctg
    gccagagctctgtttattaagcccttcatgttgctgctggatgagcccaccaaccaccttgacctggatgcctgcgtgtg
    gctggaagaagagctgaaatcgttcaagcgaattcttgtactcatctcgcactcccaagacttcttgaacggcgtttgca
    ccaacatcatccatctgcaccacaggaaactcaaatactacactggtaattatgaccagtatgtgaagacaagggaggag
    cttgaggagaaccagatgaaacgctacaactgggagcaggaccagatagcacacatgaagaactatattgctcgatttgg
    tcacggctcagctaagcttgcccgccaggctcagagcaaagagaagacgctgcagaagatggtggcctcaggcttgactt
    cccgtgtagtcagtgataagactctgtcgttttattttcctccctgtgggaag

    Send to
    or




    Organism

    Gene Expression

    Phylogeny (Gene Tree)

    Paralogs

    Citations

    Sequence



    CLICK IMAGES
    FOR LARGER SIZE