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HSP8 (Heat Shock 70kDa Protein/HSP71)

Organism
Sparus aurata (Gilthead sea bream)
Gene Expression 
Expressed in gilthead sea (Sparus aurata) bream juveniles fast skeletal muscle. Sequence was obtained from a de novo assembly of fast skeletal muscle 454 libraries
Phylogeny
Paralogs
hsp8-aII,
HSP8-aII
hsp8-b
hsp-b
Sequencing Methods
hsp8-aI: Illumina paired end sequencing

hsp8-aII: Illumina paired end sequencing

hsp8-b : assembled of ESTs c86220_g1_i2,SATP0001M18, FM159409, HS985706
Citations
  • Unpublished
  • fish-it.org.
    		•
    Sequence >c80974_g1_i2 Sparus aurata_hsp8-aI
    ATGTCGAAGGGACCAGCAGTTGGTATTGACCTTGGGACCACATACTCCTGTGTTGGTGTGTTCCAGCATGGCAAAGTTGA
    AATCATTGCCAATGACCAGGGCAACAGGACCACGCCCAGCTATGTGGCCTTCACAGACACTGAGAGACTGATTGGAGATG
    CTGCCAAGAACCAGGTGGCCATGAACCCATCCAACACTGTATTTGATGCTAAGCGTCTGATTGGCCGTAGGTTTGACGAT
    GCTGTGGTGCAGTCAGACATGAAGCACTGGCCCTTCAGGGTTGTGAACGACTCATCCAAACCCAAGGTAGAGGTTGAATA
    CAAGGGCGAGATCAAGACTTTCTTCCCTGAGGAGATTTCCTCGATGGTCCTCGTAAAGATGAAGGAGATCTCTGAGGCTT
    ATCTTGGCAAGCCTGTGAGCAATGCAGTTGTCACAGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCTACCAAAGAT
    GCCGGAACCATTTCTGGGCTTAATGTTCTGCGCATCATCAACGAGCCCACTGCTGCAGCCATCGCTTATGGCCTGGACAA
    GAAGGTTGGCTCTGAACGTAACGTCCTCATCTTTGACCTTGGAGGTGGTACTTTTGATGTGTCGATCCTGACTATTGAGG
    ATGGCATCTTTGAAGTAAAGTCCACAGCCGGTGACACTCACTTGGGTGGTGAAGACTTCGACAACCGCATGGTCAACCAC
    TTCATTGCTGAGTTCAAGCGTAAGTTCAAAAAGGAAATCACAAACAACAAGCGTGCTGTGCGTCGTCTGCGCACAGCCTG
    TGAGCGTGCCAAGCGCACACTCTCCAGCAGCACCCAGGCCAGCATTGAGATCGATTCACTCTATGAGGGTGCCGATTTCT
    ACACTTCCATCACCAGGGCCCGTTTTGAGGAGCTCAATGCGGACCTGTTCCGTGGAACCCTCGAGCCTGTGGAGAAAGCC
    CTGAGGGATGCCAAGATGGACAAATCCCAGATCCATGACATTGTCCTGGTGGGTGGTTCCACACGTATCCCCAAGATTCA
    AAAGCTGCTGCAGGACTTCTTCAATGGTCGTGACCTAAACAAGAGCATCAATCCTGATGAGGCTGTGGCCTATGGTGCAG
    CTGTGCAGGCAGCCATCTTGGCTGGTGATAAGTCTGAGAATGTGCAGGACCTGCTCCTGCTGGATGTCACACCCCTGTCC
    CTGGGAATAGAGACTGCTGGAGGAGTAATGACTGTCCTTATCAAAAGGAACACCACCATCCCCACCAAGCAAACCCAGAC
    TTTCACCACCTATTCAGACAACCAACCTGGTGTCCTCATTCAGGTTTATGAAGGTGAGAGAGCCATGACCAAGGACAATA
    ACATCCTGGGCAAGTTTGAGCTGACTGGTATTCCACCTGCTCCGAGAGGTGTCCCTCAGATTGAGGTGACCTTTGACATT
    GATGCCAATGGCATTCTCAATGTATCTGCCGTTGACAAAAGCACTGGAAAGGAGAACAAAATCACCATCACCAATGACAA
    AGGGCGTTTGAGCAAGGAGGACATTGAGAAGATGGTGCAGGAGGCAGAGCAATTCAGATCTGAGGATGAGGCCCAGAGAG
    ACAAGGTCACAGCCAAGAACTCCCTTGAGTCTCTGGCCTTCAACATGAAGAGCACTGTGGAGGACGAGAAGCTCCAAGAC
    AAGATCAGCCCTGAGGACAAAAAGACCATCGTAGACAAGTGCAACGAAGTAATTTCCTGGCTGGACAGAAACCAGACGGC
    AGAGAAAGATGAGTACGAGCACCAGCAGAAGGAACTAGAAAAGGTATGCAACCCCATCATCTCCAAGCTATACCAGGGTG
    GTATGCCAGGTGGTATGCCAGGAGGGATGCCAGGAGGGATGCCTGGTGGCTTCCCTGGTGGGGCTGGAGGCAGCTCCTCC
    TCTGGGCCAACTATCGAGGAGGTCGACTGA
    Send to
    		or

    >Sparus aurata_hsp8-aII
    ATGTCGAAGGGACCAGCAATCGGCATTGATCTGGGCACTACCTACTCCTGTGTAGGAGTGTTTCAGCACGGCAAAGTTGA
    GATCATTGCCAATGACCAGGGAAACAGAACCACACCCAGCTATGTTGCCTTCACTGACACCGAAAGGCTGATTGGGGATG
    CAGCCAAGAATCAGGTGGCGATGAACCCCACCAACACTGTTTTCGATGCCAAACGTCTCATTGGACGTCGCTTTGATGAC
    GCCGTTGTCCAGTCAGACATGAAGCACTGGCCGTTTACAGTCATTAATGAGGGTTCACGTCCCAAAGTCAGGGTGGAGTA
    CAAGGGCGAGACCAAGAGCTTCTACCCGGAGGAGATCTCCTCCATGGTGCTGATTAAAATGAAAGAGATTGCAGAGGCCT
    ACCTGGGGAAGACTGTCACTGATGCTGTAGTGACAGTGCCTGCCTACTTCAACGACTCTCAGCGCCAGGCCACCAAAGAC
    GCAGGGACCATTTCTGGGCTGCATGTTCTTCGTATCATCAATGAACCGACAGCTGCTGCTATCGCTTATGGCCTGGACAA
    AAAGGTTGGAGCTGAGAGGAACGTCCTCATCTTTGACCTGGGTGGTGGTACCTTCGACGTCTCCATCCTGACTATTGAAG
    ATGGCATCTTTGAGGTAAAGTCCACTGCAGGCGACACGCACTTGGGAGGAGAAGACTTTGATAACCGCATGGTCAACCAC
    TTCATCTCTGAGTTCAAGCGCAAGTACAAGAAAGACATCAGCGACAGCAAGAGGGCGGTGCGTCGCCTGCGCACGGCCTG
    CGAGAGGGCCAAGCGTACTTTGTCGTCCAGCACTCAGGCCAGCATCGAAATCGACTCTCTGCATGAGGGAACTGATTTCT
    ACACCTCCATCACCAGGGCGCGCTTTGAGGAGCTGAACGCAGACCTGTTCCGAGGAACCCTGGAGCCTGTGGAGAAGGCC
    CTCCGCGACGCCAAGATGGACAAAGCTCAAATTCACGACATTGTCCTGGTGGGAGGTTCCACTCGTATCCCTAAGATCCA
    GAAGCTGCTGCAGGACTTCTTCAATGGAAAAGAACTCAATAAGAGCATCAACCCTGATGAGGCAGTGGCCTACGGTGCAG
    CTGTCCAGGCAGCCATCCTGTCAGGCGACAAATCTGAAAACGTGCAGGACCTGCTGCTGCTGGATGTGACCCCCTTGTCT
    CTTGGCATTGAGACTGCTGGAGGAGTCATGACTGTTCTCATCAAGAGGAACACCACTATCCCCACGAAGCAGACCCAGAC
    TTTTACCACCTACTCAGACAACCAGCCTGGTGTGCTCATTCAGGTGTTTGAGGGTGAAAGGGCCATGACTAAAGACAACA
    ACCTTCTGGGGAAATTTGAGCTGATTGGGATCCCCCCTGCACCCCGCGGGGTTCCTCAGATTGAGGTGACCTTTGACATT
    GACGCCAACGGCATCATGAATGTGTCTGCGGTCGACAAGAGCACTGGAAAGGAGAACAAGATCACCATCACCAATGACAA
    AGGTCGCTTGAGCAAGGAGGACATCGAGCGTATGGTCCAGGAAGCGGAGAAGTACAAGGCGGAGGATGACGTGCAGAGAG
    ACAAGGTTGCTGCCAAGAACGGTCTGGAGTCGTACGCCTTCAATATGAAGTCCACTGTGGAGGACGAAAAGCTGAAGGGA
    AAGATCAGCGACGAGGACCGAGAGAAGATTGTGGACAAGTGCAAAGAGGTCATCAGCTGGCTGGATAGAAACCAGTCTGC
    AGAAAAAGAGGAGTTTGAGCACCAGCAGAAAGAGTTGGAGAAGGTGTGCAACCCCATCATGACCAAGCTGTACCAGAGTA
    CAGGCGGGGTGCCCGGAGGAATGCCAGGGGGGTTCCCCGGAGGTGGCGCTGCTCCTGGAGGAGGAGCATCCTCCGGCCCC
    ACCATCGAGGAGGTCGACTAA
    Send to
    		or

    >Sparus aurata hsp8-b
    ATGTCGAAGGGACCAGCAGTTGGTATTGACCTTGGGACCACATACTCCTGTGTTGGTGTGTTCCAGCATGGCAAAGTTGA
    AATCATTGCCAATGACCAGGGCAACAGGACCACGCCCAGCTATGTGGCCTTCACAGATAGTGAGCGGCTGATTGGTGATG
    CAGCCAAGAATCAGGTTGCCATGAACCCAACCAACACAGTTTTTGATGCCAAGAGACTGATTGGCCGCCGGTTTGACGAT
    GCAGTTGTACAGTCAGATATGAAGCACTGGCCATTTAATGTCATCAATGACAACACCCGCCCCAAGGTTCAAGTTGAGTA
    CAAGGGTGAGTCAAAGTCCTTCTACCCAGAGGAGGTCTCATCTATGGTGCTGACAAAGATGAAGGAGATTGCTGAAGCCT
    ACCTCGGAAAAACGGTCAACAATGCTGTAATTACGGTACCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACTAAGGAT
    GCTGGCACAATCTCTGGCCTCAATGTTCTGCGCATCATCAACGAGCCAACTGCTGCTGCCATTGCTTATGGATTGGACAA
    AAAGGTTGGGTCTGAAAGGAACGTTCTTATCTTTGATCTTGGTGGAGGCACCTTTGACGTGTCAATTTTGACCATTGAGG
    ATGGCATCTTTGAGGTAAAGTCCACTGCCGGAGATACCCATCTTGGTGGGGAAGATTTCGACCAACCGCATGGTCAACCA
    CTTCATCGCAGAGTTCAAGCGCAAGTACAAGAAGGACATCAGCGACAACAAGAGAGCTGTGCGTCGTCTGCGCACCGCCT
    GTGAAAGGGCAAAGCGCACCCTGTCTTCCAGCACCCAGGCCAGCATTGAAATTGACTCTCTGTATGAGGGAGTTGACTTC
    TACACCTCAATCACCAGGGCTCGCTTTGAAGAGCTTAATGCTGACCTCTTCCGTGGCACCTTGGACCCCGTCGAGAAGTC
    ACTCCGTGACGCTAAGATGGATAAGGGGCAGATTCATGACATCGTGTTGGTTGGTGGCTCCACCAGAATCCCCAAGATCC
    AGAAGCTGCTCCAGGATTTCTTCAATGGAAAGGAGCTTAACAAGAGCATCAATCCAGATGAAGCTGTGGCTTACGGTGCT
    GCTGTCCAGGCTGCCATCCTGTCTGGTGACAAGTCTGAGAATGTGCAGGACTTGCTGCTTCTGGATGTCACCCCTCTGTC
    CCTGGGTATTGAGACTGCTGGAGGTGTCATGACTGTCCTTATCAAACGTAACACCACCATTCCTACCAAGCAGACCCAGA
    CCTTCACCACCTACTCCGACAACCAGCCTGGTGTGCTCATCCAGGTCTATGAAGGAGAGCGTGCTATGACCAGAGATAAC
    AACCTGCTGGGCAAGTTTGAGCTGACAGGCATCCCTCCTGCTCCTCGTGGTGTTCCCCAGATCGAGGTGACATTTGACAT
    TGATGCCAATGGCATTATGAATGTCTCTGCTGTAGACAAGAGCACTGGCAAGGAGAACAAGATCACAATCACCAATGACA
    AGGGTCGTCTCAGTAAGGAGGACATTGAACGCATGGTTCAGGAAGCTGAGAAGTACAAGGCTGAAGACGATGTCCAGCGA
    GACAAGGTGTCTGCTAAGAATGGCCTGGAGTCGTATGCATTCAACATGAAGTCCACTGTGGAGGATGAAAAACTTGCTGG
    CAAAATCAGTGATGACGACAAGCAGAAGATTTTGGACAAATGCAATGAGGTCATAAGCTGGCTGGACAAGAACCAGACTG
    CCGAGAGGGATGAGTATGAGCATCAACAGAAGGAGCTGGAGAAGGTGTGCAACCCCATCATCACTAAGTTGTACCAGAGT
    GCTGGTGGCATGCCTGGTGGTATGCCAGAGGGCATGGCTGGTAGCTTCCCTGGAGCCGGTGGTGCAGCCCCTGGTGGTGG
    ATCATCTGGACCAACCATCGAGGAGGTTGACTAA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E.Sarropoulou
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