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CTSD (Cathepsin D)

Organism
Sparus aurata (Gilthead sea bream)
Gene Expression 
Expressed in gilthead sea (Sparus aurata) bream juveniles fast skeletal muscle. Sequence was obtained from a de novo assembly of fast skeletal muscle 454 libraries.
Phylogeny
Paralogs
CTSDa,
Sequencing Methods
CTSDa: 454-GS-FLX

CTSDb: 454GS-FLX sequencing and AF036319 Sanger sequencing
Citations
  • fish-it.org.
    		•
    Sequence >SA_CathepsinD-a
    TTCTGTGACTCTCGGACTGTTACGATGAGGAGCCTGGTCCTGTTCGTGTTCGCGGCGCTGGTTCTGACCGCCGACGCGCT
    GGTTCGAATTCCCTTAAAGAAATTCCGTTCCATCAGACGTGAGCTGACGGACTCGGGGAGGACCGCGGAGGAGCTCCTGG
    CTGGCAAACACTCCACTAAGTACAACTTTGGCTTCCCCTCCAGCAATGCACCCACTCCAGAAACCCTGAAGAACTACCTT
    GACGCGCAGTATTACGGTGAGATCGGCCTGGGGACTCCTCCTCAGCTCTTCACTGTGGTGTTTGATACGGGCTCCTCCAA
    CCTGTGGGTGCCCTCCGTTCACTGCTCCCTCTTAGACATCGCCTGCTTGCTTCACCACAAATATAATTCTGCCAAGTCCA
    GCACATACGTGAAGAACGGCACCGCCTTTGCAATCCAGTATGGATCTGGCAGTCTGTCGGGCTACCTCAGTCAGGACACA
    TGCACAATCGGAGACATCGCAGTGGAGAAACAGCTTTTCGGAGAAGCCATCAAGCAGCCCGGTGTGACCTTCATCGCTGC
    CAAGTTTGACGGCATCCTCGGCATGGCCTACCCACGCATCTCTGTGGACGGTGTGGCTCCCGTCTTTGACAACATCATGA
    GCCAGAAGAAGGTGGAGAAGAACGTCTTCTCCTTCTACCTGAACAGGAACCCCGACACCGAGCCCGGCGGTGAGCTGCTG
    CTCGGAGGAACTGACCCCAAATACTACAGCGGAGACTTCAACTACGTCAACATCACCCGCCAGGCGTACTGGCAGATCCA
    CATGGACGGGATGTCAGTGGGAACCCAGCTGAGTCTGTGTGGGAGCGGCTGTGAAGCCATCGTGGACACCGGGACGTCTC
    TGATCACCGGGCCCTCAGCGGAGGTCAGGTCCCTGCAGAAAGCCATCGGAGCCACTCCACTCATCCAGGGAGAGTACATG
    GTGAGCTGTGACAAAGTCCCGACGCTGCCTGTCATCACCTTCAAAGTTGGCGGACAGTCTTACTCTCTGACCGGAGAGCA
    GTACATCCTCAAGGTGAGTCAGGCTGGAAAGACCATGTGTCTGAGCGGCTTCATGGGTCTGGACATCCCCGCCCCCGCCG
    GGCCCCTGTGGATTCTGGGAGACGTCTTCATCGGCCAGTACTACACCGTCTTCGATCGGGACAACAACCGGGTCGGCTTC
    GCCAAGTCTAAA
    Send to
    		or

    >SA_CathepsinD-b
    CGTGTGTTTGTGCGCTCGTTAGTAGAGGAAACACTACAAAAAGTGTGTGTAATCTCTACGACGCGAGAAATGACACGGCT
    GGAGATGTTTTGTATCGTCGCGGCGCTGCTGGTGACACAATGCGCCGCCATTATCAGAGTCCCCCTTCATAAAACCAGAA
    GCATGCGCCGCCTGATGAGCGACAATGGGATGTCTTTGGAGGAGCTTCGGGCCTTGGCGAAGAGCAACGGAGCGCTGGAC
    AGCTCTCCCTCCCCTAAACTGCCTGTGGAGAGGCTGACTAACTTCATGGATGCCCAGTACTATGGGGTGATCAGCATTGG
    CACCCCTCCACAGGACTTCACTGTGCTGTTTGACACGGGCTCCTCCAACCTCTGGGTCCCCTCCATTCACTGCTCCTTCC
    TCGATATCGCCTGCTGGCTTCACCATCGTTACAACTCAAAGAAGTCGACCACATACGTTCAGAACGGCACAGAGTTTTCC
    ATCCGGTACGGCAGAGGCAGCTTGTCTGGCTTCATCAGCGGGGACACGGTCTCTGTTGCAGGTCTGCCTGTTCCTCGCCA
    GCAGTTTGGTGAAGCTGTGAAGCAGCCTGGCATCACGTTTGCAGTGGCACGGTTTGATGGAGTCTTGGGCATGGCCTACC
    CTTCCATATCAGTAGCTAATGTCGTTCCGGTGTTTGACACAGCCATGGCTGCCAAACTGCTGCCCCAGAACATTTTCTCT
    TTCTACATAAGCAGAGACCCAAAAGCAGCTGTAGGAGGAGAGCTGACTCTGGGAGGGACAGATCCCCAGTACTACACTGG
    AGACCTGCACTATGTCAATGTGACACGAAAGGCCTACTGGCAGATCGGTGTGGACGGACTTCAAGTTGGCAATCAGCTCA
    GTCTTTGCAAAGCTGGTTGCCAGGCCATTGTTGACACGGGAACGTCCCTAATTGTAGGTCCAGTGGAAGAAGTCAGAGCG
    CTGCAAAAAGCCATCGGAGCTCTGCCTCTGCTGATGGGAGAGTACTGGATTGACTGTAAGCGGATCCCATCGCTGCCTGT
    TGTCTCTTTCAACATTGGGGGGAAGATGTTTAACCTGACTGGAGAGGATTATGTCATGAAGGAGTCTCAGATGGGTATGT
    CAATCTGTCTGTCGGGCTTCATGGCCATGGACATCCCTCCTCCTGCAGGCCCCCTGTGGATCCTGGGAGATGTATTCATC
    GGGAAGTACTACACTGTCTTTGACAGGAACGCTGATCGTGTAGGGTTTGCCCCAGCCAAG
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by Daniel Garcia de la Serrana
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