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GAPDH (Glyceraldehyde-3-phospate dehydrogenase)

Organism
Solea senegalensis (Senegalese sole)
GO term(s)
Molecular Function: GO:0004365
Cellular Component: GO:0097452
Biological Process: n/a
Gene Expression
GAPDH-1

Relative GAPDH-1 expression levels in tissues.


GAPDH-2

Relative GAPDH-2 expression levels in tissues.
Phylogeny
Paralogs
GAPDH-1,
AB300322
GAPDH-2
AB291587
Citations
  • Manchado M., Infante C., Asensio E., Cañavate JP. (2007). Differential gene expression and dependence on thyroid hormones of two glyceraldehyde-3-phosphate dehydrogenases in the flatfish Senegalese sole (Solea senegalensis Kaup). Gene 400(1-2):1-8. doi:10.1016/j.gene.2007.05.008.
  • Manchado M., Infante C., Asensio E., Cañavate JP., Douglas SE. (2007). Comparative sequence analysis of the complete set of 40S ribosomal proteins in the Senegalese sole (Solea senegalensis Kaup) and Atlantic halibut (Hippoglossus hippoglossus L.) (Teleostei: Pleuronectiformes): phylogeny and tissue- and development-specific expression. BMC Evolutionary Biology 7:107. doi:10.1186/1471-2148-7-107.
    		•
    Sequence
    >AB300322 Solea_senegalensis Glyceraldehyde-3-phospate dehydrogenase-1
    ATGGTGAAAGTCGGTATCAATGGATTTGGCCGCATTGGTCGTCTGGTGACCCGTGCTGGTTTCAGCTCAAAGGTGGTGG
    AGATTGTGGCCATCAATGACCCATTCATCGACCTGGAATACATGGTTTACATGTTCAAGTATGATTCCACCCACGGCCGC
    TACAAGGGCGAGGTCAAGATTGAGGGTGACAAGCTGGTCATCGACGGACACAAGATCTCAGTTTTCCATGAGAGGGACCC
    TGCCAACATCAAATGGGGCGAGGCTGGTGCCCAGTATGTGGTTGAGTCCACTGGTGTCTTCACCACCATTGAGAAGGCCT
    CAGCTCACTTGAAGGGCGGTGCCAAGAGGGTGATCATCTCTGCACCCAGCGCTGATGCTCCCATGTTTGTTATGGGTGTC
    AACCATCAGAAATATGAGAACTCCCTGAAGGTTGTCAGCAACGCCTCCTGCACAACCAACTGCCTGGCTCCCCTGGCCAA
    GGTCATTAATGACAACTTTGTCATTGTTGAGGGCCTGATGAGCACAGTTCATGCCATCACTGCCACCCAGAAGACCGTGG
    ACGGACCCTCCGGCAAACTGTGGAGGGATGGCCGCGGTGCCAGCCAGAACATCATCCCCGCCTCAACCGGTGCTGCCAAA
    GCTGTGGGCAAAGTCATCCCTGAGCTCAACGGCAAGCTGACTGGCATGGCTTTCCGTGTCCCCACCCCCAACGTGTCGGT
    GGTTGACCTGACTGTTCGTCTGGAGAAACCCGCCAAATATGATGACATCAAGAAGGTTGTGAAGGCTGCAAGTGAGGGAC
    CCATGAAGGGCATTCTGGGATACACAGAGGACCAGGTCGTCTCCACAGACTTCAACGGTGATTGCCACTCCTCCATCTTT
    GATGCTGGCGCTGGCATCGCTCTCAACGACCACTTTGTCAAGCTGGTCACATGGTACGACAACGAGTTCGGCTACAGCAA
    CCGTGTCTGCGACCTGATGGCCCACATGGCCTCCAAGGAGTA
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    >AB291587 Solea senegalensis Glyceraldehyde-3-phospate dehydrogenase-2
    ATGTCAGACCTCCGTGTTGGAATCAATGGCTTCGGTCGTATTGGCCGTCTGGTCCTGAGGGCTTGCCTTCAGAAAGGC
    ATCAAGGTTGTGGCCATCAATGACCCCTTCATTGACTTGGAGTACATGGTCTACATGTTCAAGTATGACTCCACCCACGG
    CCGTTACAAGGGTGAGGTGTCCCATGAGAATGGAAAGCTCATCGTCGATGGCAGTGCCATCTCTGTTTTCCAGTGTATGA
    AGCCATCCGAGATCCCCTGGGGCAGCTCTGAAGCCATGTACGTTGTAGAGTCCACTGGAGTCTTCCTCAGTGTCGATAAG
    GCCTCTAGTCACATCCAGGGTGGAGCCAAGCGCGTGGTTGTGTCTGCTCCCTCACCTGATGCACCAATGTTTGTCATGGG
    AGTCAATGAGAGCAAATACGACCCATCCTCCATGACCATTGTCAGCAGTGCCTCCTGTACCACCAACTGCCTCGCCCCCC
    TAGCCAAAGTCATCCAGGATAACTTTGGCATCGAGGAGGCTCTCATGACTACAGTCCACGCATATACAGCCACCCAGAAA
    ACAGTAGATGGTCCCAGCTCCAAGGCCTGGCGTGACGGCCGTGGTGCCCACCAGAACATCATTCCAGCCTCCACTGGTGC
    TGCTAAGGCAGTGGGCAAAGTCATTCCTGAGCTCAACGGTAAGCTTACAGGAATGGCCTTCAGGGTGCCAGTGGCTGATG
    TGTCAGTGGTTGACCTGACATGCCGTCTGTCCAAGCCTGGATCTTATGCTGAGATCAAGGAAGCCGTCAAGAAGGCCGCA
    CATGGGCCCATGAAGGGAGTGCTGGGTTACACTGAGGACCAGGTGGTTTCCTCCGACTTCATTGGTGACACCCACTCCTC
    CATCTTTGATGCTGGAGCTGGCATCTCCCTCAATGACAACTTTGTCAAGCTCATTTCCTGGTATGACAATGAGTTTGGCT
    ACAGCCACCGTGTCGCCGACCTGCTGCTGTACATGCACTCCAAGGAGTA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by Elena Sarropoulou
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