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GAPDH (Glyceraldehyde-3-phospate dehydrogenase)

Organism
Oncorhynchus mykiss (Rainbow trout)
GO term(s)
Molecular Function: GO:0004365
Cellular Component: GO:0097452
Biological Process: n/a
Phylogeny
Paralogs
Citations
  • Thiebaud P., Rescan P.Y., Barillot W., Ralliere C., Theze N. (2001). Developmental program expression of myosin alkali light chain and skeletal actin genes in the rainbow trout Oncorhynchus mykiss. Biochimica et Biophysica Acta 1519:139-142. doi: 10.1016/S0167-4781(01)00221-4.
  • Abnet C.C., Tanguay R.L., Hahn M.E., Heideman W., Peterson R.E. (1999). Two forms of aryl hydrocarbon receptor type 2 in rainbow trout (Oncorhynchus mykiss). Evidence for differential expression and enhancer specificity. The Journal of Biological Chemistry 274(21):15159-15166. doi: 10.1074/jbc.274.21.15159.
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    Sequence >AF360980.1 Oncorhynchus mykiss Glyceraldehyde-3-phospate dehydrogenase-1
    TCACAAACGAGGACTAGACCAACTCAGGCAAAATGGTGAAAGTAGGTGTCAATGGATTCGGCCGTATCGGGCGTCTGGTG
    ACCCGTGCTGCATTCCACTCCAAGAAGGGAGTTGAGATTGTTGCCATCAACGACCCCTTCATCGACCTGGACTACATGGT
    CTACATGTTCAAGTATGACTCCACCCACGGACGTTTCCACGGTGAGGTCAAGGCTGAGGGTGGCAAGCTGGTCATCGATG
    GACACAAAATCACTGTGTTCCACGAGAGAGACCCAGCTAACATCAAGTGGGGAGATGCTGGTGCCACCTATGTAGTTGAG
    TCAACAGGTGTTTTCACCACCATTGAGAAGGCCTCTACCCATCTGAAGGGAGGTGCCAAGAGGGTTGTCATCTCTGCTCC
    CAGCGCTGATGCACCCATGTTCGTCATGNGCGTCAACCACGAGAAGTACGAGAACTCCCTCAAGGTTGTCAGCAATGCGT
    CATGCANNACCAACTGCCTGGCTCCCCTGGCCAAGGTCATCCACGATAACTACCACATCATTGAGGGTCTGATGAGNACC
    GTTCANGCCGTCACCGCCACCCAGAAGACAGAAGATGGTCCTTCTGGAAAGCTGTGGAGGGATGGACGTGGTGCCAGCCA
    GAACATCATCCCTGCCTCCACCGGANGACGCAAGGCTGTCGGCAAGGTCATCCCCGAGCTGAACGGNNAAGATCACTGCA
    TGGCCTTCCGTGTCCCCACCCCCAACGTCTCAGTGGTGGACCTGACCGTCCGTCTGGAGAAGCCTGCCAGCTACGACGCC
    ATCAAGAAGGTTGTCAACNNNGCCGCCGATGGACCCATGAAGGGAATTCTCGGCTACACGGAGCAACAGGTTGTCTCTTC
    AGACTTCAACGGCGACACCCACTCCTCCATCTTTGATGCCGGCGCTGGCATTGCTCTGAACGACCACTTCGTCAAGCTGG
    TCACATGGTATGACAATGAGTTCGGCTACAGCAACCGCGTCATTGACCTGATGGCTCACATGGCCACCAAGGAGTAAAGC
    AACCAACCAAACGCTACTGCGCTACGTCATGTGACCACATATTTCCCATTCGATTGGACTATCGCCCTTGCCATGAGAAA
    GTTACCCGCATGAAACAAATAACTAACAATCACAACTAATTTATTTTTGTATTGTAAAGCCCCTGTTCTGGTCTTGTGAA
    AGGTGAGATGGAATCTGGGTGTGAAGACATTTTCTCTGTTTGTTGCACTGAACTGCTTCATTCAGAAGCGGAATAAAAGT
    CCTCTGTGAGTAAAAAAA
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    		or

    >AF027130.1 Oncorhynchus mykiss Glyceraldehyde-3-phospate dehydrogenase-2
    CGGCACGAGCAAGGTTCACCACTACAACCCAATCAACAGCAACTATGTCAGACCTCTGTGTTGGAATCAACGGATTTGGC
    CGTATTGGCCGCCTGGTCCTCAGGGCCTGCCTGCAGAAGGGAATCAAAGTCGTTGCCATCAACGATCCCTTCATCGACCT
    GCAGTACATGGTTTACATGTTCAAGTATGACTCCACCCACGGCCGTTACAAGGGTGAGGTGAGCATGGAGGACGGGAAGC
    TGATTGTGGATGACCACTCCATCTCCGTATTCCAGTGTATGAAGCCCCATGAGATCCCATGGGGTAAAGCCGGTGCCGAT
    TACGTCGTTGAATCCACCGGAGTCTTCCTCAGCATTGACAAGGCCTCTTCCCACATCCAGGGTGGTGCCAAGCGGGTGGT
    TGTGTCCGCCCCCTCACCTGACGCCCCCATGTTCGTCATGGGAGTCAACGAAGACAAGTTCGACCCCTCCAGCATGACCA
    TCGTCAGTAATGCATCTTGCACGACTAACTGCCTGGCCCCCCTGGCTAAGGTCATCCACGACAACTTCGGCATCGAGGAG
    GCCCTCATGACCACAGTCCACGCCTACACCGCCACCCAAAAGACGGTGGACGGCCCCTCTGCCAAGGCATGGCGCGATGG
    CCGTGGTGCCCACCAGAACATCATCCCTGCCTCCACCGGAGCTGCCAAGGCTGTGGGCAAGGTCATCCCTGAGCTCAACG
    GCAAGCTGACTGGCATGGCCTTCCGTGTGCCCGTGGCTGACGTATCAGTGGTGGAACTAACCTGCCGCCTGTCCCGGCCT
    GGCAGCTACGCTGAAATCAAAGGGGCTGTCAAGAAGGCCGCCGAAGGACCCATGAAGGGATACGTGGGATACACTGAGTA
    CTCTGTTGTGTCTTCTGACTTCATTGGAGACACCCACTCCTCCATGTTTGATGCTGGCGCTGGCATCTCCTTCAACGACA
    ACTTTGTCAAACTCATTTCCTGGTATGACAATGAGTTTGGCTACAGCCACCGTGTCGCTGACCTGTTGCTGTACATGCAT
    TTTAAGGAGTAACTGTCCGGCTCCAGAAAGCTGCAATGGGACCCACCCCCCTTTTACATGCACTCACACCCTCCAGTGTC
    ACACCCATAGTACCCCCAGCCCTTCCACCACTCTATACAACACAACTTAGTCTCTGTAGTAGGCTGTGTGAACAAGTATT
    TGTTTTTTCCTTAATGAGAGTCCCACTGAGACGGTTTTGATTTGACAGTATGTGTTTGTGTTCCCAGAACATTGCTGTGA
    TGTTTCCATACTGGCTGTTACCATGTAATATTGGTGTTAAAATAATTTTAGTTTAAGAGTCAAGTGAGAAAGACAAGCTA
    CTGTAACTAAAAAAGTAATAAATCTTTACAAATGTCAAAAAAAAAAAAAAAAAA
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    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou
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