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PPAR-alpha (Peroxisome proliferator-activated receptor alpha )

Organism
Oreochromis niloticus (Tilapia)
Phylogeny
Genomic Map Locations
PPAR-alpha1
ON_LG13

PPAR-alpha2
ON_Chr.23
Paralogs
PPAR-alpha1,
XM_003443920.2
Sequencing Methods
PPAR-alpha1: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167404.1) annotated using gene prediction method:Gnomon, supported by EST evidence.

PPAR-alpha2: Downloaded form Ensembl database
Citations
  • Fish-it.org
    		•
    Sequence >XM_003443920.2 Oreochromis niloticus PPARA-1
    ATGGTCGACATGGAGACCCAGTACCATCCCCCCTCTCCCCTGGAGGACTCGGTGCTGGGCAGTCCCCTGTGTGCTGATGA
    CGATTTCATGGGTGGCATGGAGCAGCTCCAGGACATCTCCCAGTCCATCAGCGACGACGCTCTCAGCTCCTTTGGTGTCC
    CAAAATATCAGTCCTCAAGCAACGGCTCTGATGGGTCCACCGTCCTCGATGCGCTCACGCCAGCATCCAGCCCATCATCG
    GTTGTTTACGGCGTGGTGGCTAGCCAGGAGGAATTGTCATCTTCATCCACATCACTGAACCTGGAGTGTCGAGTGTGTTC
    TGACCGCGCCTCGGGCTACCACTACGGAGTCCATGCCTGCGAGGGCTGCAAGGGTTTTTTTCGACGGACCATCCGTCTGA
    AGCTGGAGTATGACAAGTGTGAACGTCGCTGCAAAATCCAAAAAAAGAACCGCAACAAGTGCCAATACTGCCGCTTCCAG
    AAGTGCCTGTCAGTGGGAATGTCCCACAATGCCATCCGGTTTGGTCGGATGCCCCAGTCAGAGAAGCTAAAACTAAAGGC
    GGAAATGGTGACGGTGGACAAGGAGGTGGAAAACCCCCAGCTAGCTGACCAGAAGACCCTGGCCAAGCACATTTATGAGG
    CTTACCTGAAGAACTTCAACATGAACAAGGCCAAGGCTCGATCCATTCTCATGGGCAAGACCAACACTGCTCCTTTTGTC
    ATTCACGACATGGAGACCCTCCAGCTGGCAGAGCAGACACTGGTGGCCAAGATGGTCGGCTCTGTGGGAGCGATGAAGGA
    CAAGGAGGTGGAGGTTCGGATTTTCCACTGCTGCCAGTGCACGTCAGTGGAAACCGTCACGGAGCTCACAGAGTTTGCAA
    AGTCCGTCCCCGGATTCTCGAACCTGGACCTGAACGATCAGGTGACTCTTTTGAAATACGGAGTGTACGAAGCCATTTTC
    GCCATGCTCGCCTCCAGTATGAACAAGGACGGGCTTCTTGTAGCGTACGGCTCGGGCTTCATCACCCGGGAATTCCTCAA
    GAGCCTGCGTCGACCGTTCAGCGACATGATGGAGCCAAAGTTCCAGTTTGCCATGAAGTTTAATGCACTGGAGTTGGACG
    ACAGTGATCTGGCTCTCTTTGTGGCTGCCATCATCTGCTGTGGCGACCGACCAGGCCTGGTGAATGTGGCACACATCGAG
    GCGATGCAGGAGAGCATCGTGCAGATCCTGCAGCTCCATCTGCTGGCCAATCACCCTGACGACACTTTCCTCTTCCCCAG
    GCTGCTGCAGAAACTAGCTGACCTGAGGCAGTTAGTCACTGAGCATGCACAGCTTGTGCAGGAGATCAAAAAGACAGAGG
    ACACCTCACTGCATCCACTCCTGCAGGAGATCTACAGAGACATGTACTGA
    Send to
    		or

    >ENSONIT00000021074 Oreochromis niloticus PPAR-alpha2
    TCCCTGATCTCTACCATGGCAGGGGATCACTACAGCCCCCCATCCCCACTGGGGGATTCCCTCCTGGGAAGTCCACTTTG
    TGGAGACCTGATGGAGGATCTTCGTGATATCTCCCAGTCTATAGGGGGTGACGCACTGGGGTTTGATTTTCCAGAGTACC
    AGAGCACTGGTTCGGGGTCCAATAGCTCTGTCGCACTGGAGACCTTGACTCCAGCCTCGAGTCCATCATCAGGAGTGTGC
    GGAGCAGCGGCAGGCCAAGACGAGAGCGGCAGCACCCTCAACCTCGAGTGCCGGGTGTGCTCTGATAAAGCTTCGGGCTT
    CCACTACGGGGTGCACGCATGCGAAGGCTGCAAGGGTTTCTTTAGGAGGACCATCAGGCTGAAGCTGGAGTATGATAAGT
    GTGAGCGGAACTGCAAAATCCAAAAGAAGAACCGAAACAAGTGCCAGTACTGCAGATTCCACAAGTGCCTCTCTGTGGGC
    ATGTCCCACAACGCCATCCGGTTTGGTCGTATGCCCCAGGCAGAAAAACTGAAGCTCAAGGAGGAAAGCAAGATGGTTGA
    GAAAGAGGTGGAAAGTCCCTTAATGTCTGACCACAAGTTTCTGGTCAGGCAGATCCATGATGCCTACATGAAGAACTTCA
    ACATGAACAAGGCAAAAGCACGGCTCATACTCACTGGAAAAACTAGCAAGCCGCCTTTCATCATCCACGACATGGAGACG
    TTCCAGCTGGCGGAGAGAACGTTAGCGGTCCATATGATAAACAGCGACTATCCGGAGTCTGACAGCGTCCTCGGACAAAG
    GGAGGCCGAAGCCAGGCTCTTCCACTGCTGCCAGAGCACCTCAGTGGAGACTGTCACAGAGCTAACAGAGTTTGCCAAGG
    CTATGCCGGGTTTCCAGAGTCTGGATTTGAATGATCAGGTGACTCTCTTGAAGTACGGTGTTTACGAAGCCCTCTTCACC
    CTCTTGGCCTCCTGCATGAACAAGGACGGACTCCTGGTGGCCCGTGGTGGAGGCTTTATCACCCGTGAGTTCCTCAAGAG
    TCTCCGCCGACCATTCAGTGACATGATGGAGCCCAAATTCCAGTTTGCCACACGCTTCAACTCTCTGGAGCTGGACGACA
    GCGACCTAGCTCTTTTTGTGGCTGCTATTATCTGCTGTGGAGATCGTCCAGGCCTGGTAGACGTACCTCTAGTAGAGCAG
    TTGCAGGAAAGCATTGTTCAGGCGCTGCGGCTCCACCTGCTGGCCAACCACCCAGATGACACCTTCCTTTTCCCCAGACT
    GCTGCAGAAGTTGGCTGACCTCCGGGAGCTGGTCACTGAGCATGCTCAGCTGGTGCAAGAAATCAAGACGACAGAGGATA
    CTTCCCTGCACCCGCTGCTGCAAGAAATATACAGGGACATGTACTGA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E.Sarropoulou
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