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PPAR-alpha (Peroxisome proliferator-activated receptor alpha )

Organism
Takifugu rubripes (Pufferfish)
Phylogeny
Genomic Map Locations
PPAR-alpha1
TR_Chr.9

PPAR-alpha2
TR_Chr.18
Paralogs
PPAR-alpha1,
NM_001097630.1
PPAR-alpha2
NM_001097629.1
Sequencing Methods
PPAR-alpha1: Sanger sequencing

PPAR-alpha2: Sanger sequencing
Citations
  • Kondo H., Misaki R., Gelman L., Watabe S. (2007). Ligand-dependent transcriptional activities of four torafugu pufferfish Takifugu rubripes peroxisome proliferator-activated receptors. General and Comparative Endocrinology 154(1-3):120-127. doi:10.1016/j.ygcen.2007.05.034.
  • Fish-it.org
  • Sequence >NM_001097630.1 Takifugu rubripes Peroxisome PPAR-alpha1
    ATGGTTGACATGGAGAGCCACTACCATCCCCCCTCACCCCTGGAGGAGTCGATGTTGGGCAGCCCCCTGTGCACCGATGA
    CGACTTCATGGGGAGCATGGAGGAGCTCCAGGACATCTCCAAGTCCATCAATAGTGACACCCTCAGCTCCCTGGACGTCA
    ATGACTACCCGCCCTCCAGCAATGGCTCTGAAGGTTCCACTGTACTAGACGCCCTGACGCCCGCCTCCAGCCCATCTTCA
    GTAGTTTATGGGTTGGTGGCAGGCCAGGAGGAGCTTTCGGCCTCCTCCTCCGTGCTCAACCTGGAGTGTCGCGTCTGCGC
    TGACCGTGCCTCGGGCTACCACTACGGAGTCCACGCCTGCGAGGGCTGCAAGGGGTTTTTTCGGCGCACTATCCGTCTGA
    AGCTGGAATATGACAAGTGCGAACGTCGCTGCAAGATCCAGAAGAAAAATCGCAACAAGTGCCAATACTGTCGCTTCCAG
    AAGTGCCTGTCGGTGGGCATGTCCCATAACGCCATCCGGTTTGGCCGGATGCCCCAGTCAGAGAAGCTGAAGCTGAAGGC
    AGAGATGGTGACGGGGGACAGGGAGGTGGACGACCCCCGGGTAGCCGACCAGAAGACGCTGGCCAGGCAGATTTACGAGG
    CCTATCTGAAGAACTTTAACATGAACAAGGCCAAGGCTCGAAGCATCCTCAGTGGCAAGACCAGCACCCCTCCTTTTGTC
    ATCCGCGACATGGAGACCCTGCAGCTTGCGGAGCAGACCCGGGTGGCAAAGATGGTGAGCTCAGAGGGAACGCTGAAGGA
    CAGAGAGGTGGAGGTTCGGATTTTCCACTGCTGCCAGTACACGTCGGTGGAGACCGTCACCGAGCTCACCGAGTTCGCCA
    AGTCCGTCCCGGGCTTTTCCAGGTTGGACCTCAACGATCAAGTGACTCTGTTGAAGTACGGAGTGTACGAAGCTCTCTTC
    GCCATGTTGGCCTCCTGCATGAACAAGGACGGGCTCCTGGTCGCCTACAGCTCAGGCTTCATCACCCGGGAGTTCCTCAA
    GAGTCTGCGGCGGCCGTTCAGTGACATGATGGAGCCCAAGTTCCAGTTTGCTATGAAATTTAATGGTTTGGGGCTGGACG
    ACAGTGACCTGGCTCTGTTTGTGGCTGCAATCATCTGCTGTGGAGACCGTCCGGGCCTGGTGAACGTGGCCCACATTGAG
    CGAATGCAGGAGAGCATCGTACGAGTGCTGCAGCTCCATCTCCTGGCCAACCACCCCGACGACACGTTCCTTTTCCCCAG
    ACTGCTGCAGAAACTGGCAGACCTCCGGCAGCTGGTCACCGAGCACGCACAGGTGGTGCAGGAGATCAAAAAGACAGAGG
    ACACCTCACTCCACCCGCTGCTGCAGGAGATTTACAGAGACATGTACTGA

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    >NM_001097629.1 Takifugu rubripes Peroxisome PPAR-alpha2
    ATGATGGCGGGGGACGACTTCAGCCCGCCGTCCCCGCTGGGGGATTCCCTGCTGGACAACCCGCTGTGTGGGGATCTGAT
    GGACGACCTGCGCGAGATCTCCCACTCTCTGGGGGACGGCTCGCTGGGGTTCGACTTCCCCGAGTACCAGGGCACCGAGC
    CTGAGGGCTCCAGCACCCTGGACACTCTGAGCCCGGCCTCCAGTCCGTCCGGGGGGGCCTGTACAGCAGCAGCGCCGGGC
    TCAGAGGAGGCTTTCCCCTCTCTGAACCTGGAGTGCCGCGTGTGCTCCGACAAGGCCTCGGGGTTCCACTACGGCGTGCA
    CGCCTGCGAGGGCTGCAAGGGTTTCTTCCGCAGAACCATCCGGCTCAAGCTGGAGTACGACAAGTGCGAAAACAACTGCA
    AAATCCAGAAGAAGAACCGCAACAAGTGCCAGTACTGCCGGTTTCACAAATGTCTGTCTGTGGGCATGTCGCACAACGCC
    ATCCGTTTCGGCCGGATGCCTCAGGCAGAGAAGCTCAAGCTCAAGGCTGAAAACAAGATGGTGGAGAAAGAGGAGGCGAG
    CCCCATGCCGGCCGATCACAAGGTGCTGGTCAGGCAAATCCATGACGCCTACATGAAAAACTTCACCATGAACAAGGCCA
    AAGCTCGGCTGATACTCACCGGAAAGACCAGCAAGCCGCAGCCGTTTATCATCCACAACATGGAGACGTTCCAGCTGGCG
    GAGAAGACGCTGGCCGCTCACGTGCTGCGCGAGCACCACGGCGGGTCCGAGAACAGCCTCCACATCGGGGACGTGGTCCC
    GGTCCTGGGGTGCGGGATGCTCCGGCAGAGGGAGGCTGAAGCCAGGCTCTTCCACTGCTGCCAGAGCACCTCGGTGGAGA
    CGGTCACCGAGCTGACGGAGTTTGCCAAGGCGGTGCCGGGATTCCAGAGCCTGGATCTCAACGACCAGGTGACCCTGTTG
    AAGTACGGCGTCTACGAAGCCCTCTTCACGCTCCTGGCGTCCTGCATGAACAAAGACGGGGTGCTGGTGGCCCGGGGAGG
    CGGCTTCATCACCCGGGAGTTCCTCAAGAGTCTCCGGCGGCCCTTCAGCGACATGATGGAGCCCAAATTCCAGTTTGCCA
    CACGCTTCAACTCTCTGGAGCTGGACGACAGCGACTTATCTCTGTTTGTGGCCGCCATCATCTGCTGCGGAGACCGTCCG
    GGCCTGGTGGACGTGCCTCTGGTGGAGCAGCTGCAGGAGACCATCGTGCAAGTGCTGCGGCTCCACCTGTTGACCAACCA
    CCCCAACGACAGCTTCCTGTTCCCCAGACTGCTGCAGAAACTGGCTGACCTCCGGGAGCTGGTCACGGAGCACGCTCAGC
    TGGTGGAGGACATCAAGAAAACAGAGGACACGTCGCTGCACCCGCTGCTGCAGGAGATCTACAGAGACATGTATTAA

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    Organism

    Phylogeny (Gene Tree)

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence


    Data input by M.Iliopoulou E.Sarropoulou

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