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otx2 (Homeobox Protein otx2)

Organism
Xiphophorus maculatus (Platyfish)
GO term(s)
Molecular Function: GO:0003677, GO:0003700
Cellular Component: GO:0005634
Biological Process: GO:0007275
Phylogeny
Paralogs
Sequencing Methods
otx2a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005372321.1) annotated using gene prediction method: Gnomon.

otx2b: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005372198.1) annotated using gene prediction method:Gnomon.
Citations
  • Heather D. Veilleux, Lynne Van Herwerden, Nicholas J. Cole, Emily K. Don, Christian De Santis, Danielle L. Dixson, Amelia S. Wenger, Philip L. Munday. (2013). Biology Open 2:907-915. doi:10.1242/​bio.20135496.
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    Sequence >XM_005805615.1 Xiphophorus maculatus otx2a
    ACAAATCAAAGCCGCTTGATGGGTCTATAAGCCCAACCAAAGGATCGTTTAATATAAACAGAAGACTGAAATTCATCTGG
    ACCATTTCAGAATTCGGAGACGCCAGTGGGGGGGGGAAACGCTATTCTTAATATTATTATTATTTGCGCCATTTTCTTTA
    CTACTTTTTGTGATCGGGGTGCCGGAGGCAAACATGATGTCCTATTTGAAACAACCGCCGTACACGGTGAACGGACTGAG
    CTTATCTACCTCAGGAGTGGACTTACTGCATCCTTCAGTGGGATACCAAGCGACCCCTCGCAAGCAGAGGAGGGAGCGGA
    CCACCTTCACCCGGGCCCAGCTCGACGTGCTGGAGAACCTGTTCTCCAAGACCCGCTACCCTGACATCTTCATGAGGGAA
    GAGGTGGCTTTAAAGATCAACCTTCCTGAATCCAGAGTGCAAGTCTGGTTTAAAAACAGACGAGCCAAGCACCGCCAGCA
    GGCCCAGCAGACCCAGACGGGCGTGCAGAACAAGTCTGTCAGCAGGCCGGTGAAAAAGAAAGGCTCCCCGGTGAGAGAGG
    CCAGCACTGAGAGCGGAGCCAGCGGCCAGTTCACGCCGCCTTCCAGCACCTCCATGCCGGCTGTGAGCAGCAGCAACAGC
    AGCAGCAGCAGCAACAGCAGCAGCAGCGCGGCGCCTGTCTCCATCTGGAGCCCGGCCTCCATCTCCCCGCTCTCCGACCC
    GCTCTCCTCCACAACCTCCTCCTCCTCTTCCTCCTGCATGCAGCGGTCTTACCCAATGACCTACACCCAGGCGACGGGCT
    ACAACCAGGGCTACACGGGTTCCTCGTCCTACTTCACCGGGATGGACTGCGGCTCCTATCTGTCGCCCATGCACCACCAG
    CTGTCCGCCACGGGCTCCACCATGAGCCCCATGGGCGCCAGCGGGGTGTCCAGCCACCTGAGTCCGGCGTCCTCTCTCTC
    CTCGTCGGCGTACGGAGGGACGGGGCTCGGCTTCACCGGTGCTGCGGACTGTCTGGACTATAAGGACCAAACTGCCTCAT
    CGTGGAAGCTAAATTTCAATTCGGACTGTCTGGATTATAAAGACCAAGCAGCTTGGAAGTTTCAAGTGTTGTGAGGGAAG
    AAAAATGGAAGAAATTGGGAACTTTTACGAACCCATGCAGAGCCGGTCTAAGACTGAATGCGGTCCTGAGCGGAAATTGA
    TTCGGGTGGCACCACCAGCAACCACACCACCACCTATATTAACTTATTGGGCTTTTTTTATATATATATTCCCACTTACA
    CAGTTTGCTAACATAACAGTTAGATTGATCACATCACACAATTATGATATAATATTTCACAATATGTATTTAAATAAAGG
    GATACCGACAAGTAAACTGTGGAGAAATCAATGGCCAAATTTAAAAGTAGGTTCATTCTCGATTAACAGACATCTTTGGA
    TCTATGTTCTGTGTGGTGGCATGCTGGGGGTCCTAAGCACCAGCGTTTGGCTCTTGCCTC
    Send to
    		or

    >XM_005797715.1 Xiphophorus maculatus otx2b
    GTGCAGGGGGGGGAAAAACTCACATCTGCTCTCTGTTATTTTGGAACAGGTATCCGGTGTAACACGGAGCCCACGGAGAT
    CAAAGAGAACACGAGGGGCGCCTTCGGAGCGACATCAGTTTTCAAAATTTTCTCCAACTTCAGCCCTCAGACAAACATTA
    GCATGATGTCGTATCTAAAGCAACCACCTTACACTGTCAATGGCCTGAGCTTAACAACCTCCGGGATGGACCTTTTGCAT
    CCATCAGTGGGTTATCCAGCCACGCCACGAAAACAAAGGCGAGAAAGGACTACTTTTACGCGCGCACAGCTCGACGTTTT
    GGAGGCGTTGTTCGCCAAAACCAGGTACCCGGACATATTCATGCGCGAAGAAGTGGCGCTGAAAATCAACTTACCTGAGT
    CCAGAGTACAGGTTTGGTTTAAGAACCGGCGGGCCAAGTGTCGCCAGCAGCAGCAACAACAACAGAACGGCGGACAAAAC
    AAGGTGCGACCCCCAAAAAAGAAAAGTTCCCCAACCAGGGAGGTGAGCTCGGAGAGCGGGGCCAGCGGCCAGTTCACGCC
    CCCCACTAGCACCACCACAGTCCCCGCCATCCCCACCAGCACTGCCCCGGTGTCCATTTGGAGCCCCGCGTCTATTTCTC
    CTCTCTCGGACCCCCTGTCTACCTCCTCTTCCTGCATGCAGCGGTCCTACCCCATGACCTACACTCAGGCCTCGGGCTAC
    AGCCAAGGCTACGCCGGGTCGACGTCCTACTTCGGGGGCATGGACTGCAGCTCTTACCTCACTCCAATGCACCACCAGCT
    GTCGGGGCCCGGCTCGACTCTCAGCCCGATGAGCACGAACGCCGTCACAAGCCATCTGAACCAGTCTCCGGCGTCCCTCT
    CCACCCAGGGCTACGGGACGTCCGGCCTGGGCTTCAACTCCACGGCAGACTGCTTGGATTATAAGGACCAAGCGGCGTCA
    TGGAAGCTGAACTTCAATGCAGATTGCTTGGATTATAAGGATCAAACATCCTCATGGAAATTCCAGGTCCTGTGAACAGA
    GCAGTGACGATCACATGAGACGCAGTTCAGCCATCCTTCAATAAAACTCAACATCAGACTGGTTGAGCCTGGCTGCGCTC
    TCCTTTTTTTTTATCCCGGTGGTCTTCGGTACTCCTAAAGGAGAGGTTTAATTTATTTTAGCACTGGCATATAGATTTTT
    CCCCCTTTCATTCACAACTTGTAGCCCCTCATCCACCTCTATCATTGCGTGCCTCTGTGCGTAAAAACACCTGTTGAGGA
    CAACCGCAGCCACGGAACTAAAACTTCAGTGAGTCCTGCTGAAGTGCAGACCTCTTTAAAAAATGAACCTGCTGGCAGAG
    AGACATGAGGATACTGTGTGGACATGGATGCACTACTTTATTTAAGAAAAAGTGTTTATAAGGAATCAATATGTAGTTTC
    TAAGAGACAATCAGTGTGCGTCTTAAATAAATGGTACATAGGTGTTTTTTTATCTGTGCTATAGCCTTCGAAACTGTGAT
    CTGTTGTATTGTATGCAATTTGTGAGCCCCCTCTCGCATCAGACTCTCTGCTGTGATTTTAATAGATTTTTAACTTTTTT
    GGGACAAAAACTGAGCTAAAAGTAAGATTCAAAAGTGACACAGAGACGAGATTTTTGTTTTCTGCAGGCACATTATGGAG
    GGTTAGGCCATACTGGAAAAGACTCTCAGCTGCTTGCTCCCCCCACCCCACCCCTCTACTGATCTGATTGTGGATCCTTC
    TCTCGGTCCCCCAA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M. Iliopoulou E. Kaitetzidou
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