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otx5 (Homeobox Protein otx5)

Organism
Oryzias latipes (Medaka)
Phylogeny
Genomic Map Locations
otx5-like-a
Med-Chr.14

otx5-like-b
Med-Chr.13
Paralogs
otx5-like-a,
XM_004076024.1
otx5-like-b
XM_004075458.2
Sequencing Methods
otx5-like-a: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004087999) annotated using gene prediction method:GNOMON, supported by EST evidence.

otx5-like-b: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004087995.1) annotated using gene prediction method: Gnomon, supported by EST evidence.
Citations
  • www.fish-it.org.
    		•
    Sequence >XM_004076024.1Oryzias latipes Homeobox Protein otx5-like
    CCAAGGCGCAAAGGAATCTGGGAGCAGCGCACCTGAGCGTTTCTGTGCGCGCGGGGTCAGAGTGGAAGGAGCTGTCCGAA
    TGCTGAACGAGCCAGGCGGGGCTCTGCTGCGAAGCTGACAGTCAATGACAGCACTCCGAGCAGTTTGAAAGAAAAAAGTC
    TTGAGAACGCGGAGCGCGCCGCTCGAATCGGACGCGTCCACTTGTTGCCGCCGTTGCGCTCCGAGGGTCCCGCCGCTGCT
    GCGCTGCGTGTCCGAGCTTCGGGAAGCTCTTAAAAGCTGCTGCAAGGATGATGTCCTACATAAAGCAACCCCATTACACC
    ATGAACGGGTTAAGTTTGCCTGCGCCAGGAATGGATGTGCTTCACACCACCGTCGCTTATCCACCCACTCCCAGGAAGCA
    GCGCAGAGAGCGCACCACCTTCACTCGGACACAGCTGGACATCCTGGAAGCTCTGTTCTCCAAGACCCGCTACCCGGACA
    TCTTCATGAGGGAGGAGGTGGCCCTCAAGATCAACTTGCCAGAGTCCCGTGTGCAGGTGTGGTTCAAGAACCGCCGTGCC
    AAATGCCGTCAGCAGCAGCAACAAAGCAGTGGCCAGTCCAAGCCCCGCCCCCCAAAGAAGAAGGCCTCCCCAGTGCAGGA
    GGCCAGTGCACCCGATCCTGTCCCCAACCCATCCGGCTCCTACAGCCCCTCCTCCGCCCAGTCAGGGCCCAGCCTGGCCG
    CAAGCTCCAGCACCGGGAACACCGCTGTGTCCATCTGGAGCCCGGCCATCTCCCCCCTGCCCGACCCCCTGGCCTCCTCC
    TCGGCGCCCTGCATGCAGCGGCCCTCGCCCTACCCCATGAGCTACGGCCAGCCGGCGTACACGCAGGGCTACGCCAGCAC
    CACCTCCTACTTCACCGGCCTGGACTGCAGCGCCTACCTGTCGCCCATGCATTCACAGCTCTCAGGCACTGGGGGTGCTC
    TCAGCCCCATCACTGTGCCCTCCATGGGGGGCTCCCTGAGCCAGTCCCCAGCATCACTGTCTTCACAGGGCTACAGCACT
    GCCTCCTCCCTGGGCTTCACTTCCGTTGACTGCTTGGACTACAAGGACCAGCAGGCCTGGAAACTGGGCTTCACGACTAT
    GGACTGCCTGGACCACAAGGACCAAAACTCCTGGAAATTCCAGGTCCTCTAGACAGAGTGGGTGGGTGGGGGGGCTCGTC
    TGTGTGAGCACAGGGGGCAGCAGTTCTGCCAGAAGACGAATTGTCACCAATTATCTGTTTTTTGTTTGTGAGAATTAGTT
    AGTTTTTCTCTTTGTGCAGCAGCCTTTGTAGAGACGCTTTTCTGTGGAGGAACTTCAGGAAAGAGCGGCGGCGGTCCGAC
    TCAGATCCCTCCTTCATCCTCATCCCGTGTTAAATGAAACGACTGAGGCCTCGGATGATGAAGGAAAATCTGCAATTTGC
    TCCAGGAAGTTCACAGAGTCATGTCACATGTGCACGTGTTGATGTGTGGCATGTGTGGCATGTGCACGTGTTGGTTTTGT
    TTGAAGTTGTGTTCCAGCCACCAGTGTAAATGACTCTAAACTCTTCATCATTATCGTTGTTTTCCTGCTACTGTTAGTGC
    AGTCGTCTGATGTTGTCCAGCCTTTTGGATCATTTGTGTTTGTGTTAGTTGGACTTTAGTGCTGTCAGCCTGACATGTTT
    GATGGAAAATAGATTTCGTGTTTTAGTAGTGTGACATATTAAACTGATCTGCCCTTCA
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    		or

    >XM_004075458.2 Oryzias latipes homeobox protein otx5-like (LOC101154795)
    ATGATGTCCTACATTAAACAGCCCCATTACGCCGTCAACGGGTTAACGCTGTCCGGCCCCGGCATGGATCTGCTCCACTC
    CGCCGCCGTCGGATATCCAAGCACTCCCCGCAAACAGCGCCGGGAACGCACCACCTTCACGCGTGCGCAGCTGGACATCC
    TGGAGGCTCTGTTCGCCAAAACCCGATACCCGGACATCTTCATGAGGGAAGAGGTGGCCCTGAAGATCAACCTGCCGGAG
    TCTAGAGTTCAGGTTTGGTTCAAGAACCGGCGGGCCAAGTGCCGCCAGCAGCAGCAGCAGAGCACAGGCCAGTCCAAACC
    CAGGCCTCCTAAGAAGAAGGCGTCACCAGCGCGCGAGAGCAACGCCGAGGCCTCTGCCAACGCCACCAACGGACCATACA
    GCCCTCCGCCCCCACCTCCAGGGACCGCCATCACCCCCAGCTCCAGCTCTGCCAGTGCTACAGTGTCCATCTGGAGCCCC
    GCCTCCATTTCTCCGTTACCAGACCCCCTGTCTGCCTCCAGCACCCCATGCATGCAGCGCACCACCACCTACCCCATGAC
    CTACACCCAGGCCCCAGCCTACAGCCAGAGCTACGCCGGCTCCTCCTCCTACTTCACTGGCCTGGACTGCAGCTCCTACC
    TGTCTCCAATGCACTCGCAGCTGTCTGGGACCGGAGGGGCCCTTAGCCCCATCACGGCTTCGTCCATGGGGGGGCCTCTC
    AGCCAGTCCCCAGCTTCCCTCTCTTCCCAGGGCTACACGGCTGCCTCCTTGGGTTTTGGAGCTGTCGATTGTCTGGACTA
    CAAAGATCAAGCTGCCTGGAAGCTGAATTTCAATGCAGCTGACTGTCTGGACTACAAAGACCAGAACTCCTGGAAGTTCC
    AGGTCTTATAG
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

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    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

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    Data input by Elena Sarropoulou
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