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otx2 (Homeobox Protein otx2)

Organism
Oreochromis niloticus (Tilapia)
Phylogeny
Genomic Map Locations
otx2-a
ON_LG19

otx2-b
ON_LG15
Paralogs
Sequencing Methods
otx2-a: Downloaded from Ensembl

otx2-b: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167504.2) annotated using gene prediction method:Gnomon.
Citations
  • Heather D. Veilleux, Lynne Van Herwerden, Nicholas J. Cole, Emily K. Don, Christian De Santis, Danielle L. Dixson, Amelia S. Wenger, Philip L. Munday. (2013). Biology Open 2:907-915. doi:10.1242/​bio.20135496.
  • fish-it.org.
    		•
    Sequence >ENSONIT00000001097 Oreochromis niloticus Homeobox Protein otx2-a
    ATGATGTCCTATTTGAAGCAACCGCCCTACACCATGAACGGATTGAGCTTATCTACCTCAGGAGTGGACCTGCTGCATCC
    TTCCGTGGGATACCAAGCAACCCCCCGCAAACAGAGAAGGGAGAGGACGACCTTCACTCGGGCCCAGCTCGACGTGCTGG
    AGAATCTGTTCGCCAAGACTCGGTACCCGGACATCTTCATGAGAGAGGAGGTGGCCTTAAAGATCAACCTGCCTGAATCC
    AGAGTGCAAGTGTGGTTTAAAAACCGACGGGCCAAACATCGCCAGCAGGCCCAGCAAACCCAGACTGGCGTGCAGAACAA
    GGCTGTCAGCAGGCCGGTGAAAAAGAAAGGCTCGCCAGTCCGAGAGGCCAGCTCAGAGAGCGGAGCCAGCGGCCAGTTCA
    CGCCGCCTTCGAGCACCTCAGTCCCGGCTGTGAGCAGCAGTGCGGCTCCCGTGTCCATCTGGAGTCCTGCTTCCATCTCC
    CCGCTCTCAGACCCACTGTCTACCTCCTCCTCCTCCTGCATGCAGCGCTCGTACCCCATGACTTACACCCAGGCGACGGG
    CTACAACCAGGGTTACACGGGCTCCTCGTCCTACTTCACGGGGATGGACTGCAGCTCCTACCTTTCGCCCATGCACCACC
    AGCTCTCCGCCGCAGGCTCTGCCATGAGCCCCATGAGCAGCAACGGGGTGTCTAGCCACCTGAGCCCGGCGTCGTCCCTC
    TCCTCCTCGGCGTATGGACCGGCGGGGCTCGGGTTCAGCGGCTCTGCAGACTGCCTGGACTACAAGGACCAAACAGCCTC
    CTCGTGGAAGCTCAATTTCAACGCAGACTGTCTGGATTACAAAGACCAATCAGCGTGGAAATTCCAAGTGTTGTGA
    Send to
    		or

    >XM_003453049.2 Oreochromis niloticus Homeobox Protein otx2-b
    ACCTCAGCTCAGTCCTGCGGCTCCCATTGGCTGGCACTTTGTACAAAATCTAACTCAAACCACTTCACTCACAACACACC
    AACAAATCCTAAAGGCGTACATGCAGCCTCCCTCCTTCACTCCGCCGCTGTCGCAACGCTTCAGAACCTCATGTAGGCGC
    TCAACGCTTAACTTTTATCTCCAGTGAAGACGGCTGCTCCTGCTCTGCTCGGGTTTGTGATATTTTCCTTTTATGCGACA
    GGACGTCGTCGATTTCTACTGACTTTTATTATTTCTCCCGGAGGACACCAAGTAGACAAAGAATTTTCCACTCATCCCTG
    CCAAGGTGCCAGGTGTAATACGGACCACACGGCGAACAGAGGACACCGAATACTCCTCGGGAGCTCCATCAATTTTCAAA
    ATTTTCTCCAACTTCAGCACTCAGACAAACATTAGCATGATGTCGTATCTAAAGCAACCACCTTACACAGTTAATGGCCT
    CAGCTTAACTACTTCCGGCATGGATCTTTTACATCCATCAGTGGGCTATCCAGCCACTCCACGGAAGCAGAGGCGAGAAC
    GGACTACTTTTACGCGCGCACAGCTCGACGTTTTGGAGGCGTTATTCGCTAAAACTCGGTATCCTGATATATTCATGCGC
    GAAGAGGTAGCGCTGAAAATCAATCTACCTGAATCCCGGGTACAGGTCTGGTTTAAAAACCGGCGGGCAAAGTGTCGCCA
    GCAGCAGCAGCAGCAGCAGAATGGGGGGCAGAACAAAGTGCGACCTGCCAAAAAGAAAAGTTCCCCAACCAGAGAAGTGA
    GCTCGGAGAGCGGGGCCAGCGGCCAGTTCACACCCCCCACCAGCACCACTACGGTCCCCGCCATCTCAACCAGCACCGCG
    CCAGTGTCCATATGGAGTCCGGCGTCCATTTCTCCCCTCTCAGATCCCCTATCTACCTCCTCCTCTTGCATGCAGAGGTC
    TTATCCGATGACCTACACACAGGCCTCGGGCTACAGCCAGGGCTACGCCGGGTCGACGTCCTACTTCGGGGGTATGGACT
    GCGGCTCTTACCTCACTCCCATGCACCACCAGTTGTCAGGCCCGGGGTCAACTCTCAGTCCGATGAGCACAAACGCAGTC
    ACAAGCCATCTGAACCAGTCCCCGGCGTCCCTCTCCACCCAGGGATACGGGACGTCCGGCCTGGGCTTCAACTCCACAGC
    AGACTGCTTGGATTATAAGGACCAAGCGGCGTCGTGGAAGCTGAACTTCAATGCCGATTGCTTGGATTATAAGGATCAAA
    CGTCCTCATGGAAATTCCAGGTCCTGTGAACCGAGCAATCAGCTGTCAAAAAGTGCACAAACAGTGACGATCACACGAGA
    CACAGCGCTGCCATCCCTCAACAGAACACTTCAGACTGGGTAAAACGTGAGCCTGGCACACCGAGGCAGGGCTCTCAGGG
    GGGCCTCTAGTTTTTGGCATGATGGTCTTTGGTCCTCCTAGAGGAGAAGTTAATGTATTTTAGCACTGGCAAAGAGATTC
    CCCCCCCTCCCGTTTATTCACCGGTTGTAGCCCTTCTTCTTTATCTGTCAGTGCGTACCTATGTGCGTAAAAAAACAGAC
    AAACAAACAAACAAAAAAAAAACAAAAAAACACCTGTTGAGGACGTCACAGAGTGGACTCAAAAAGAAAAGCACACCACA
    GCCACGGAAGTAAAAGAACAAAACTCAAGTTAATAGTCCTGCTGAAGTGCTCGGGATGGACAGACCTTCTTAAAGCTTCT
    TAAACAACTTTGCCGCCCTGCCGGCAGAGGGACATGAGGATGGCGTGTGGACATGGATGCACTACTTTATTTAAGAAAAA
    AAAGTGTTTATAAGGAATCAATATGTAGTTTCTAAGAGACAATCAGTGTGCGTCTTATATAAATGGTACATATGTGTTTT
    TTTTTTTTATTTTTATCTGTGCTAGCCTTCGAAACTGTGATCTGTTGTATTGTATGCAATTTGTGAGCCCCCCCTCGCAT
    CGGACTCTCTGCTGTGATTTTATTAGATTTCTAACTTTGTTTTCTTTCGTTTTTGTTTCTTTTGGGGTTTTTTCACCAAC
    GAAAGATGCTAATGGTTATTTTACTGCATCACAAAGAGAGACGAGACTTTCCAAGCACATGGTGGATGGTAGTAATTATC
    AAGGGTTAGCCATACTGGAAAAGACTCTCGGCTGCTGAGAGCTCTACACTTGCTTCCCCTCCATTGATCTCAACACACGG
    TGATTGTGGATCCTTTACTGGCTCCAAAGATGGTGTGACCTCACCGCTGAAAAGACATGAATAAAGGTCCTGTGAGCTTA
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    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou E.Sarropoulou
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