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GAPDH (Glyceraldehyde-3-phospate dehydrogenase)

Organism
Tetraodon nigroviridis (Tetraodon)
GO term(s)
Molecular Function: GO:0004365
Cellular Component: GO:0097452
Biological Process: n/a
Gene Structure


Phylogeny
Paralogs
GAPDH-1,
CR680329
GAPDH-2
CR717152
Citations
  • Jaillon O., Aury JM., Brunet F., Petit JL., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C., Salanoubat M., Levy M., Boudet N., Castellano S.,Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., Biémont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P., Coutanceau JP., Gouzy J., Parra G., Lardier G., Chapple C., McKernan KJ., McEwan P., Bosak S., Kellis M., Volff JN., Guigó R., Zody MC., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., Laudet V., Schachter V., Quétier F.,Saurin W., Scarpelli C., Wincker P., Lander ES., Weissenbach J., Roest Crollius H. (2004). Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 431(7011):946-57. doi:10.1038/nature03025.
    		•
    Sequence >CR680329 Tetraodon nigroviridis Glyceraldehyde-3-phospate dehydrogenase-1
    ATGGTCAAAGTTGGCATCAACGGATTCGGCCGCATCGGCCGTCTGGTGACCCGCGCTGCCTTCACCTCCAAGAAGGTGGA
    GATTGTGGCCATCAATGACCCCTTCATCGACCTGGAGTACATGGTCTACATGTTCAAGTATGACTCCACCCACGGCCGCT
    ACAAGGGTGAGGTGAAGGCTGAGGGTGGCAAGCTGGTCGTCGATGGACATGCCATCACCGTTTTCCACGAGAGGGACCCT
    GCTAACATCAAATGGGGTGAGGCTGGTGCCCAGTATGTGGTTGAGTCCACTGGCGTGTTCACCACCATCGAGAAGGCCTC
    CGCCCACTTGAAGGGTGGTGCTAAGAGAGTGATCATCTCTGCACCCAGTGCCGACGCCCCCATGTTTGTCATGGGCGTCA
    ACCATGAGAAGTACGACAATTCCCTTGCTGTTGTCAGCAACGCTTCCTGCACAACAAACTGCCTGGCTCCCCTGGCCAAG
    GTCATCAACGACAACTTCGGCATCATTGAGGGCCTGATGAGCACAGTTCACGCCATCACCGCCACCCAGAAGACCGTGGA
    CGGCCCCTCGGGCAAGCTGTGGAGAGACGGCCGCGGCGCCAGCCAGAACATCATCCCCGCCTCCACCGGCGCTGCCAAGG
    CTGTCGGCAAGGTCATCCCCGAGCTGAACGGCAAGCTGACCGGCATGGCCTTCCGCGTTCCCACCCCCAACGTGTCTGTG
    GTGGACCTGACGGTCCGCCTGGAGAAGCCCGCCAAGTATGAGGACATCAAGAAGGTGGTGAAGGCGGCAGCAGATGGGCC
    CATGAAGGGCATCCTGGGATACACGGAGCACCAGGTTGTGTCCACAGACTTCAACGGCGACAGCCACTCCTCCATCTTTG
    ATGCCGGCGCCGGTATCGCCCTCAACGACCACTTCGTCAAGCTGGTCACATGGTACGACAACGAGTTCGGATACAGCAAC
    CGCGTGTGCGACCTGATGGCCCACATGGCTGGAAAGGAGTA
    Send to
    		or

    >CR717152 Tetraodon nigroviridis Glyceraldehyde-3-phospate dehydrogenase-2
    ATGTCAGAGCTCTGCGTTGGAATCAATGGCTTTGGGCGTATTGGCCGCCTGGTCCTGAGGGCTTGCCTGGAGAAAGGCAT
    AAAGGTGGTGGCCATCAACGACCCCTTCATCGACCCGGAATACATGGTCTACATGTTTAAATACGACTCCACTCACGGCC
    GTTTCAAGGGCGAAGTCAGTCAGGAGAATGGCAAGTTGGTCGTAGATGGCCAGTCCATCTTCGTTTACAAGTGCATGAAG
    CCAGCTGAGATCCCCTGGGGCGATGCTGGAGCCAAGTATGTGGTTGAATCCACTGGAGTCTTCCTCAGCACGGAGAAGGC
    CGGCGCTCACCTCCAAGCTGGTGCTAAGCGTGTGGTTGTGTCCGCTCCATCACCCGATGCTCCGATGTTCGTCATGGGTG
    TTAACGAGGACAAGTATGACCCCTCCAGCATGACCATTGTCAGCAACGCCTCCTGCACCACCAACTGCCTGGCCCCCTTG
    GACAAAGTCATCCACGACAACTTTGGCATCGAGGAGGGTCTGATGACTACGGTCCACGCTTACACGGCCACTCAGAAGAC
    GGTGGACGGCCCCAGTGGCAAGGCCTGGCGCGACGGCCGCGGNGCCCACCAGAACATCATCCCTGCTTCCACCGGTGCCG
    NCAAGGCCGTGGGCAAGGTCATCCCTGAACTCAACGGCAAGCTGACAGGCATGGCTTTCAGGGTGCCAGTGGCTGACGTG
    TCGGTGGGTGGACCTGACCTGCCGGCTGTCCAAGCCTGCGTTTTACGCCCCATCAAGGAGCCCTCAAGAAGCCGCCACGG
    ACCCCAGAAGGGAGTGCTGGGTTACACGGAGGACCAGGTGGTGTCCTCTGATTTCAGCGGGGACTCTCACTCCTCCATCT
    TTGATGCTGGCGCTGGCATCTCCCTTAGCGACAACTTTGTCAAGCTCATTTCCTGGTATGACAATGAGTATGGCTACAGC
    CACCGCGTAACTGACCTGCTGCTGTACATGCACGGAAAGGAGTA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou
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