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MyoD (Myogenic differentiation )

Organism
Danio rerio (Zebrafish)
Phylogeny
Genomic Map Locations
MyOD-1
Dr_Chr.25
Paralogs
Citations
  • Hu B., Zhang W., Feng X., Ji W., Xie X., Xiao W. (2014). Zebrafish eaf1 suppresses foxo3b expression to modulate transcriptional activity of gata1 and spi1 in primitive hematopoiesis. Developmental Biology 388(1):81-93. doi:10.1016/j.ydbio.2014.01.005.
  • Superina S., Borovina A., Ciruna B. (2014). Analysis of maternal-zygotic ugdh mutants reveals divergent roles for HSPGs in vertebrate embryogenesis and provides new insight into the initiation of left-right asymmetry. Develpmetal Biology 387(2):154-166. doi:10.1016/j.ydbio.2014.01.013.
  • Ping XL., Sun BF., Wang L., Xiao W., Yang X., Wang WJ., Adhikari S., Shi Y., Lv Y., Chen YS., Zhao X., Li A., Yang Y., Dahal U., Lou XM., Liu X., Huang J., Yuan WP., Zhu XF., Cheng T., Zhao YL., Wang X., Rendtlew Danielsen JM., Liu F., Yang YG. (2014). Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase. Cell Research 24(2):177-189. doi:10.1038/cr.2014.3.
  • Gao J., Li J., Li BJ., Yagil E., Zhang J., Du SJ. (2014). Expression and functional characterization of Smyd1a in myofibril organization of skeletal muscles. PLoS ONE 9(1):E86808. doi:10.1371/journal.pone.0086808.
  • Luz M., Spannl-Muller S., Ozhan G., Kagermeier-Schenk B., Rhinn M., Weidinger G., Brand M. (2014). Dynamic association with donor cell filopodia and lipid-modification are essential features of Wnt8a during patterning of the zebrafish neuroectoderm. PLoS ONE 9(1):E84922. doi:10.1371/journal.pone.0084922.
  • Solnica-Krezel L., Stemple DL., Mountcastle-Shah E., Rangini Z., Neuhauss SC., Malicki J., Schier AF., Stainier DY., Zwartkruis F., Abdelilah S., Driever W. (1996). Mutations affecting cell fates and cellular rearrangements during gastrulation in zebrafish. Development 123:67-80.
  • Devoto SH., Melancon E., Eisen JS., Westerfield M. (1996). Identification of separate slow and fast muscle precursor cells in vivo, prior to somite formation. Development 122(11):3371-3380.
  • Concordet JP., Lewis KE., Moore JW., Goodrich LV., Johnson RL., Scott MP., Ingham PW. (1996). Spatial regulation of a zebrafish patched homologue reflects the roles of sonic hedgehog and protein kinase A in neural tube and somite patterning. Development 122(9):2835-2846.
  • Hammerschmidt M., Bitgood MJ., McMahon AP. (1996). Protein kinase A is a common negative regulator of Hedgehog signaling in the vertebrate embryo. Genes Dev. 10(6):647-658. doi:10.1101/gad.10.6.647.
  • Sass JB., Weinberg ES., Krone PH. (1996). Specific localization of zebrafish hsp90 alpha mRNA to myoD-expressing cells suggests a role for hsp90 alpha during normal muscle development. Mechanisms of Development 54(2):195-204. doi:10.1016/0925-4773(95)00476-9.
  • Macqueen DJ., Johnston IA. (2008). An update on MyoD evolution in teleosts and a proposed consensus nomenclature to accommodate the tetraploidization of different vertebrate genomes. PLoS ONE 3(2):E1567. doi:10.1371/journal.pone.0001567.
  • Fish-it.org
    		•
    Sequence >NM_131262.2 Danio rerio Myogenic differentiation-1
    CAAAGAAACCCTCCGAGGTCCTGCGAATTTTAGACTGTAGTTTTGAAACGTACGTTATTTCGGGATCTGAAGGACTTTGT
    CTTACTATTCCTAATTTTGGTTTTTATTTTTTTTACAAATTTACTACTTTGGAAACATTCAAGTACATTTCTTGCTTTTT
    AAACTTTAACACAAAAAAGATGGAGTTGTCGGATATCCCCTTCCCCATCCCATCAGCTGATGACTTCTACGACGACCCTT
    GCTTCAACACCAACGACATGCACTTCTTTGAAGACTTGGACCCCAGGCTTGTTCACGTGAGCCTGCTCAAACCCGACGAG
    CATCACCACATCGAGGACGAGCACGTGAGGGCGCCCAGTGGGCATCATCAGGCCGGCAGGTGCCTACTGTGGGCATGCAA
    AGCTTGCAAGAGAAAAACTACCAATGCTGACCGTCGCAAAGCCGCCACCATGAGGGAGAGGAGGCGACTGAGCAAGGTCA
    ACGACGCTTTCGAGACCCTCAAGAGATGCACGTCCACCAACCCGAACCAGAGGCTGCCCAAAGTGGAGATTCTGAGAAAC
    GCCATTAGTTATATCGAGTCTCTGCAGGCTCTTCTCAGAAGTCAAGAGGATAACTACTATCCCGTTCTGGAACATTACAG
    TGGAGACTCTGATGCTTCCAGTCCGAGATCCAACTGCTCTGATGGCATGATGGATTTTATGGGCCCAACGTGTCAGACGA
    GAAGACGGAACAGCTATGACAGCTCTTACTTCAATGACACACCAAATGCTGACGCACGGAATAATAAAAACTCAGTGGTG
    TCGAGTTTGGATTGTCTGTCCAGCATCGTGGAGCGAATTTCCACAGAGACTCCTGCATGTCCCGTGCTGTCAGTACCGGA
    GGGGCACGAAGAGAGCCCGTGTTCTCCGCATGAGGGATCTGTCCTGAGTGACACCGGAACCACCGCACCGTCCCCGACCA
    GCTGCCCTCAACAGCAGGCTCAGGAAACCATTTATCAAGTGCTTTAAAATTCTGCAACATTTCAAAACAAATTGAAAAAG
    ACAATCTGAATGAAGAAACTTTCAGCAGAAAAAGGCGAATCCGACCTTTAACGACAAAAGAAAGACTTTTGATCCACTGC
    TGGAAACTAGGAAAGAATGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
    TTTCTTTCTTTCTTTCTTTCTTTCATAGACTAATTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
    TTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATGCGGTGGAAAA
    TGTAATTCCAATATGAGAAAAGACTCAGCAGATCAGCAGAAGTGAGTTTTTTAACTAAGCTTATTTATATTGTTATATCC
    ACGTGAAAATGTGACCATATTTTTTTCCCTTTGTGAATATATTTTCTGTCACCATCACCTTTTATTTTCCTAATTATTTA
    CGGAAAAAATCGTAATCCAGATACGAATAGTAGGACCATTTTTGTATATGTGTAAATAAGATCTGTTTTGTTAAAGCGAC
    GAAAACGAACAAACATATTATTGTATTTAATGATGCCTGTTTGAAACACTAGTTTGTTGTGTCTTGTGTTAAACTTTATA
    TTTATACTTCTTAAACGAGTGAATGACGGATAAATAAAAACAACTATTTATACTGGAAAAAAAAAAAAAAAAAAAAAAAA
    AA
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    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou E.Sarropoulou
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