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MyoD (Myoblast determination protein)

Organism
Oncorhynchus mykiss (Rainbow trout)
Phylogeny
Paralogs
Sequencing Methods
MyOD-1: Sanger sequencing
Citations
  • Rescan PY., Gauvry L., Paboeuf G., Fauconneau B. (1994). Identification of a muscle factor related to MyoD in a fish species. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1218(2):202-204. doi:10.1016/0167-4781(94)90012-4.
  • Macqueen DJ., Johnston IA. (2008). An update on MyoD evolution in teleosts and a proposed consensus nomenclature to accommodate the tetraploidization of different vertebrate genomes. PLoS ONE 3(2):E1567. doi:10.1371/journal.pone.0001567.
  • Data input by Mara Iliopoulou
    		•
    Sequence
    >NM_001124720.1 Oncorhynchus mykiss Myoblast determination protein-1
    GATTTTGGCAGAACAGAACAGAAGAGTCACCATGGAGTTGCCGGATATTCCTTTCCCTATAACCTCTCCAGATGACTTCT
    ACGACGACCCTTGCTTCAACACCAGCGACATGCATTTCTTTGAGGACCTGGACCCGAGACTCGTTCATGTGGGTCTCCTC
    AAGCCGGACGACCACCATCACAAAGAGGACGAGCACATCCGGGCACCGAGTGGGCACCACCAGGCTGGCAGGTGCCTCCT
    GTGGGCCTGCAAAGCCTGCAAGAGGAAGACCACCAATGCTGATCGCAGGAAAGCGGCTACCATGCGGGAAAGAAGGCGAC
    TGAGCAAGGTGAACGACGCCTTCGAGACACTGAAGAGATGTACGTCTACTAACCCTAACCAGAGGCTGCCCAAAGTGGAT
    ATCCTGCGGAATGCCATCAGCTACATTGAGTCTCTCCAAGGCCTGCTTCGTGGGGCCGGACAGGAGGGCAACTATTACCC
    GGTGATGGATCACTATAGCGGGGACTCGGATGCGTCCAGTCCCCGCTCCAACTGCTCAGACGGAATGATGGATTTCAATG
    GTCAGTCTTGTCCACCAAGACGGAGAAACAAGTATGATAGCACCTACTTCAACGAAGCACCAAATGATTCCAGACACAAG
    AAGAACTCTGTTATTTCCAGTTTGGACTGCCTGTCAAACATCGTGGAGCGAATCACCACGGATACCTCTGCCTGTCCCGC
    TGTTCAGGACGGTTCCGAGGGTAGCAGCCCCTGTTCTCCCGGGGATGGTTCCATAGCGAGTGAGAACGGAGCCCCCATCC
    CGTCCCCGATCAACTGCGTCCCCGCCTTACATGACCCAAACACCATCTACCAGGTGTTGTGAAGTCGGGTCGGTGGACTG
    CATACAGTAATTGTACATTCTTCAAAACACAACTTATTCCTTATGGGGAGAGAACATGCCAAAGACTTGCCTAAGGTCGC
    TACAAGGCTACACACCAAAGAAGATCCGATACCGGCTTTGAAAGACATTAAAAAATGACGGTGTCCAATTTCTTAAAGAA
    CCCTTGGTCTACATTGGATAATGTGTGTGTGTGTGTGTGTGTGTGAATGTATGTGTGTGAATGTATTTATATTGTAGTAA
    GCCTATGCTATTCTAAGATAGTACAAGTCTGAATTCATATAAACGGATACCATTCTATTTGTGATCGACATAATTTAATT
    CAATGGATTATCTGTAATATGAACATTTCCAGTTGGCAAGGCGGAAACGCCGGAGATAAATGAATCCGGAAAGTGAGGAC
    CATTTTCTATATGTGTAAATAAGAGCTGCTTTGCAAAATAAAGAAGAAGAAGAAAAAAACGAACAACACACAGGAAGTGT
    TTGTAATCATATTTAATGTTGCTCTTGGATTGTTTGTGTTAGATTTTTAACTTTATATTTATAATATCAAGAACGGAGTG
    AATTACATTTTAATAAATGTATATTATAT
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    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


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