Home BLAST Help About  

myom1 (Myomesin1)

Organism
Tetraodon nigroviridis (Tetraodon)
Genomic Map Locations
myom1-a
TN_Un_random predicted is TN_Chr.15

myom1-b
TN_Chr.6
Paralogs
Sequencing Methods
myom1-a: Downloaded from Ensembl

myom1-b: Downloaded from Ensembl
Citations
  • Jaillon O., Aury JM., Brunet F., Petit JL., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C., Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P., Coutanceau JP., Gouzy J., Parra G., Lardier G., Chapple C., McKernan KJ., McEwan P., Bosak S., Kellis M., Volff JN., Guigo R., Zody MC., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C., Wincker P., Lander ES., Weissenbach J., Roest Crollius H. (2004). Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 431(7011):946-957. doi:10.1038/nature03025.
  • fish-it.org.
    		•
    Sequence >ENSTNIT00000022057 Tetraodon nigroviridis myom1-a
    AGCTCCAAGTCCACTGTTAGCAAGCAGTCGGTCTCGACTGTCAAGACCACCAGCTATCGGGAGGCCAGGGAGGCTGTGGA
    CGTCAAGGTGCAGAAGAAGACCAGGACGACGCGTATGCGGGAATCGGCAGAGAGGGTGGAGCTGAGCAAGGGGCTGGACG
    AGTGGGTGGAGTTCCGCAGAAAAATGAACCCAGACAGCCTGACGCACCCCCCAGAGTTTATCATCAAGCCCCGTGGACAG
    ACAGTGTGGGAGGGCCAGACTCTCAGCCTCCACTGCACCGTGGCCGGGTGGCCCAAGCCCAAGATCGCCTGGTACAAAAA
    CAATGTGCTAATTGATGCCAAGGCTCACCCAGAGAAATACACAGCTGAAAGCACTTACAACATGCACTCCCTGGAGATCA
    AGAACTGCAGCTTCACTGACACGGCTCAGTATAGCGTCTCCGCCCTCAACGTGAAAGGGGAAGCGTCCTACGTGGCCACC
    ATTGTAGTAAAAAGGTACCAGGAGGGTGAGGAACTTGGCCCACTTGTGCCCAAACCACATGCTTTTTGCGCCGAACATGG
    CGTCACCTTCCTAACAACCATCACCGACAAATTCGAAGTCGCCTTCGGCACCGAAGGGGAGACCGTGAGCCTGGGCTGCA
    CCGTGATTGTTTATCCCACCGTGAAAAACTACCAGCCTGAGGTGGTGTGGTACAGAGACTCCGTCCCCTTGAAGCCCTCC
    AAGTGGGTTCAGACCCACTGGTCCGGAGAACGCGCCATTCTCACTCTGGTCCACCTGAACAAGGAAGACGAGGGCATGTA
    CACACTCCGCGTAAACACCAAGTCCGGATATGACAGCTACTCTGCTTATGTTTTCGTCAGAGCAGATGCGGATGTTGAGG
    TGGAGGGGGTGCCTGTGGCTCCGCTCGATGTGTGCTGCCATGATGCCAATAAAGACTATGTGGTGGTGACCTGGAAGCAG
    CCGGCAGTGGAGGGCAGCAGCTCCATCCTAGGGTACTACGTTGACAGGTGTGAGGTGGGCACGCAGCACTGGGCTCAGTG
    CAACGACGTCCCGGTGAAGTACGCACGCTTCCCCGTCACAGGCCTGGTGGAGGGGCGCTCTTACGTCTTCAGGGTGCGGG
    CCGTCAACAAGGCGGGCGTTAGCCGTCCGTCCCGCGTCTCCGAGGCCGTGGTCGCCATGGACCCCTCAGACAGGGCCCGC
    CTCAGAGCTGGTCCATCAGCTCCTTGGACCGGAATGATCAAATTCACTGAGGAGGATCCTACTGTGGGCATTATCCCAGG
    AGAACCGACTGACGTCGTGGTGACGGAGGCTACCAAAAGCTACGTGGTTCTCGCCTGGAAGCCTCCAGTCCAGAGAGGCC
    ACGAAGGAGTCATGTATTATATCGAAAAGTGCGTTTCAGGGACGGACAGCTGGCAGAGGGTGAACACGGGGATGCCGGTA
    AAGTCCCCCCGCTTTGCCATGTTCGACCTGGCTGAGGGAAAAACCTACAGCTTCCGTGTGCGCTGCTGTAACTCCGCCGG
    CGTGGGCGAGGCCTCTGTATCCACAGGAGAGATCACTGTTGGGGATGTACTCGACCTGCCTGCTGCACCAGGCAATCCTG
    TGGTCATTAGGAACACCAACACATCAGTGGTGGTCACCTGGGGGGCCTCAAAGGACGTCAAACACCTGGTCGGATATTAC
    ATCGAATGCAGCCAGACGGGCACCGACATTTGGATGGCCTGCAACAACAAACCTGTCAAGGAGACCAGGTTCGTGTGTCA
    CGGCCTGACTAACGGGGCAAACTACGTGTTCCGGGTCAAGGCCGTTAACGCTGCTGGATACAGCCCCAGCTCCCCTGACT
    CTGAAGCGGTGGTGGTGAAAGCTGCCATCTCCGTCCCTGGAAAACCCACCGGTGTGACCCTGCTCGAGGCTGTCAAGGAC
    CGCATGGTGCTGGGTTGGACGGCGCCCGCCAATGACGGCGGAGCCACCGTGAGGGGATATTTCGTGGATTACAGGACCGT
    GAAGGGAGACGTTGTCGGAAAATGGCACGAAATGAACCACCAAGCGCTGACAACCACCTCTTATAAAGCTGAAAACCTGA
    AGGAGAACGTCTTCTACGAGTTCCAGGTGCGTGCTATGAACATGGCAGGTCTGAGTAAAGGCTCTGTGCCGAGCGCGGTC
    CTGGAGTGCAAGGAGTGGACCATTACGCTGCCAGGCGCTCCTGTCGACCTTCGCGTGCTGGAGGTTCGCGACACCTCCGT
    CGTCCTCCTGTGGGAGCCGCCGGCGTTCTGCGGTCGGACTCCTGTGAACGGATACTACGTAGATTTGAAGGAAGCCTCCG
    CCGGGGAGGACGGCTGGAAGGCCGTTCACGAGAAGGTCAACAGGGTGAAATACTTGAAGGTGAAGGGGCTGAAACCAGAC
    ACGTCCTACGTCTTCCGTGTTCGCGCCCAAAACCTCACTGGTGTCGGGAAGCCCTCAGCGACCTTGGGTCCAGTCCTGGC
    CCAGACACGCGCCGGCACCAAGGAGATTTATGTGGACGTGGACGACGATGGCGTGATCTCAATGGTCTTCGAGTGCTCCG
    AGATGACCGAGAGCTCTGAGTTCATTTGGTCCAAGAATTACCAGGCCATCACCGACACCTCCCGTGTGACTATCGTCAAC
    GAACGCGGCAGGTCCAGGGCCATCTTCAACAACCCCTCGCTGGAGGATCTGGGCACCTTCTCCTGTGTGGCCACCAACAC
    TGATGGCATGTCTTCCAGTTACACACTGACTGAAGAGGGTCTTAACCGTCTCCTGGACATCAGCCATGACAAGAAATTCC
    CCGTTATTCCCTTCAAGCAAGAAATGGGCATTGAGCTCCTTGAAAAAGGCCGCGTACGTCTGTGGACTCAGGTGGAGAAG
    TGCACATCTGCCTGCCAAGTGGATTATGTCTTTAATGACACCATCTTGACTCAAGGAAAGAAATACTCGATGAACTTCGA
    TCAGTCGACCGGCGTCATTGAAATGTTCATGGATAGCCTGCAGATCACCGACGAGGGGACGTTCACCTTTAACCTGATAG
    ATGGCAAGGCTACGGGCACAACCAGCCTGGTGCTCATTGGTGATGAATTTAGGGAGCTTCAGAAGAAGTCAGAATTTGAG
    AGGGCTGAATGGATCAGGAAACAAGGTCCTCACTTTGTTGAGTACCTGGGCTTCGCTGTGACTGCAGAGTGTGATGTGCT
    GTTGAAATGCAAGATTGGAAATGTCAGAGCAGACACAGAGATCATCTGGTCTAAGGACAACATTGAGATCGCAGAGGATG
    ACGAGGATGCCAAGAAAATCGAGAGGGAAGACGGTGAACTGACCTTTAATATCGGAAAGATCTCCAAAAACGATGCTGGC
    ATTTACAGTGTCTTCCTGAAGGACGAGAGGGGCAAAGACAAGAGCACCTTCAACCTGACAGACGAAGGATACCAGGCTGT
    GCTGAATGAGCTGTTCAGGGTCATCGCAAACTCGGCCTCAGAAATCCAGGTCCTCAGCACCGAACACGGCATCATCCTCC
    ACTCTACTGTCACATATTACCACGAAGAACAGCGCGTCGGTTGGCTCTACAAAGATGCCAAGATCGCTGCTTCCGAAAGG
    GTTAAATCAGGGGTGACAGAAGAACAGCTCTGGCTTCAGATCAACGAGCCCACTGAGAAGGACAAGGGCAAATACACCAT
    TGATATCTTCGATGGCAAGGATGGCGTGAGAAGGGTGTTTGATCTGAGCGGTCAGGCATGGGAAGATGCGTTTGAGGAAT
    TCCAGAGGCTCAAAGCCGCGGCTATCGCAGAGAGAAACCGCGCTCGTGTCATTGGAGGATTACCAGATGTGGTTGCCATC
    CAAGAGGGGAAGTCTTTGAACCTGACCGGAAACGTGTGGGGTGACCCCGTGCCAGAGGTCAGCTGGACGAAGAACGAGAA
    GGAGCTGCTGAGCGACGACCACTACAAGCTCACGTACGAGCACGGCAAGTTCGCCAGCATCACCATCGCCGCCGTCACCG
    AGGCCGACTCTGGCAAGTACGCCCTCCTGGTCAAGAACAAGTACGGGACGGAGGCCGGCGCGTTCACCGTCAGCGTGTAC
    AACCCCGAGGAGGAGGAGAGCAAGGAGGAGAAGAAGGGACAATGA
    Send to
    		or

    >ENSTNIT00000020487 Tetraodon nigroviridis myom1-b
    TCCATCCCCTTCTATCAGAAGCACCACCGCCACTACGACCGCAGTTACCGCAGCAGGGAGACGGAGACCAAACTGGCCCA
    GTACCAGTCCGGTGGCAAGTACACTGCTGGCGACAGCAGTAGCAGGAGCAGGGGCGCATGCACAATCAAAGAGGCTGCAG
    GGAAATTTAATCTTATGCAATCGCTGATAGTACATGGAAGAGACAGAAATAGCATCTTGACCTGTGCATACATGTCCTCA
    TGTTTGTCGTCCCCAGACTTGAAATCTGAGTCCAGTGTTGCTTTCACATCTGATTATATATATATTCTTTCCTCTCATTC
    TGGGCTGGAGGTGGACAGACTCAGCCCGGCGTCAAAGAGAGCCAAGCCCACTTACTTGGCTGTGGACAAAGAGAACCAAA
    TCATCGGCTATGTAGTGCCTCTCTTCAGGGGCAGTCACGAGTTTGCCGCGGGATATTTGGACACGGAGGACTGGAGCGAG
    AGACGCTCTGCTGCGTACGCGTCTCGCAGTGACGTGTTCACCAGCGACCTGGAGACGGAGAGGTCAGAGCTGACCTCCAG
    GAAGGAGGCCATGCGCCAGTCCGCTGAACGCATCTCTCTGAACAAAAGGATCCATGAACACGAGGAACACTTTAAGCGCA
    TGAACGTAGACAGCCTGATGCACTCCCCAGAGTTTGTGATCAAACCCCGCTCCCACACCATCTGGGAGAAGCAGTGCGTG
    CGCCTGCACTGCACCGTCAGCGGCTGGCCCGACCCACGGGTCGTCTGGTACAAAAACAATGTGACCATCGACCCACTTGC
    CAATCCTGGCAAGTATAAAATTGGCAGCAGCTACAACGTCCACTCACTGGAGATCAGCAATTGTGATTTTGAGGATACGG
    CGCAGTATCGTGTCTCTGCTATGAACTCCAAGGGAGAGCTGTCTGCATTTGCCTCCGTGGTGGTTAAAAGGTTCAAAGGT
    GAAGTTGATGAGTTCCTGCCAGCCCCCAGACATGGACCAGTGTCTGAGTATGGCATCACTTTCCAGACTCACATTGTGGA
    TAAGTTTGGTGTGTCGTTTGGAAGAGAGGGCGAGACCATGAGCCTGGGCTGCACCGTTGTCATCTACCCAGTACTGCAAG
    GCTACCAGCCTGGGATCCAGTGGTACCGGGACGACGTTCTGTTGTCTCCCTCTAAATGGCACCACATGCAGTGGAGCGGA
    GACAGAGCCACGCTGACACTCACCCACCTGAACAAAGAGGACGAAGGCCTCTACACCCTACGTGTCACCACCAAGTCTGG
    ATATGAGACCTACTCTGCTTACGTCTTTGTCAGAGATGCTGATGCTGAGGTGGAGGGAGCTCCAGGCTCCCCGCTAGATG
    TGCGCTGCCTGGATGCCAACAAAGATTACATTATTGTCACCTGGAAGCAGCCAGCCGTTGATGGTGGAAACCGTATTTTG
    GGATACTTTGTGGACCGGTGTGAGGTTGGAACCAACCGCTGGGTTCAGTGCAACGACACTCCAGTGAAGTTTGCCCGTTT
    TCCCGTTACGGGCTTGGTGGAGGGTCGTTCCTACATCTTCCGTGTTCGTGCCGTCAACAACAGCGGCATGAGCCAACCGT
    CCAGAGTGTCTGAGCCAGTGGCTGCCATGGATCCGGCTGACCGTGCACGAATGAGAGGTGGAACCTCTGCTCCCTGGACT
    GGACAGATCATTGTCACAGAGGAGGAGCCTGCAGAAGGCGTCGTTCCTGGCCGACCTCTGGAGTTACAGGTGACCGAGGC
    CACCAAGAACTACGTGGTCCTGAGCTGGAAGCCGCCTGCAGGGAAAGGCCTTGAGGGTGTCATGTACTACGTGGAAAAGT
    GTGTGTCAGGCACAGACAGCTGGCAGAGGGTGAACACGGACATTCCTGTTAAATCTCCACGCTTCGCACTGTTTGACCTC
    GCCGAGGGGAAGTCCTACAGCTTCCGTGTCCGCTGCTGCAACTCCGCCGGTGTCGGCGAGCCTTCGGACGCCACCGAAGC
    CACCACCGTCGGCGACAAGCTTGATATCCCATCAGCCCCAGGGAAAGTCGTCCCCACCAGAAACACGGACACATCTGTGG
    TGGTGTCCTGGGAGGCCTCCCGTGATGCCAAAGAACTGGTCGGCTACTACATCGAGGGGAGCGTTGTGGGCAGCGGCGTG
    TGGGAGCCATGCAACAACAAGCCTGTAAAAGGTACCAGGTTCATCTGCCATGGACTCACGACAGGAGAGAAATACGTGTT
    CAGGGTGAGGGCAGTGAATGCAGCAGGGCTCAGCCAGTTCTCCCCGGAGTCGGAGCCAGTGGAGGTGAAGGCTGCTATTG
    GGGGCGGCATCCCTCACGGTGTGTTTCCGGAGATGGGGCCGAGGGGTAACACTGGCCCACTAACTGAGCACAGGCCACGC
    TGGACGGGCGCCTCTCCCCCGACACTAAGCAAACATGCATTAAAGAGCTCTGGCCTCGCAAAGCCCGCCCCCGCGGAGAG
    TCAAAAGAAGGGGTGCAAGACAGGCGGCTCGTGCTGCACCCCCGACCTGGCTGAAGACTCTGAATCTGTGTCAGACTCAG
    TTTCTGGCCCACTTACTGACGTAGCTGCACATGTAGACCCAGCTCAGGGTCAGGTCACAGGGGCCCTCACTGAGCCTGAG
    ACCAGACAGGCACCCTCTGTCGTCCTAGCATCCCCCGCTCCACCCTATGGCATCACTGTGCTGGAGAGCGTCCGGGACTC
    CATGGTGCTGGCCTGGAAACAGCCCACCTTCATCGGCGGCGTGGACGTGACCGGCTACTTTGTGGATTACCGCGAGGTGG
    TTGACGGCGTGCCGGGACAGTGGCACGAGGCCAACGTGCGAGCGATCAGCGAGAGGGCCTACAGGGTTTCTGACCTGAAG
    GAGAACAGGAAGTACCAGTTCCAGGTGAGGGCGGCCAACATTGCTGGGGTTGGCGTCCCGTCTCTGCCCAGTGACATCTT
    TCTGTGTGAGGAGTGGACCATCGCTGTGCCAGGTCCTCCCCATGATCTGCAAATAAGAGAGGTGCGAAGCGACTCCCTGG
    TGTTGCTATGGAAACCACCAGTGTACCAGGGCCGTGACCCCGTCAACGGCTTCTACGTGGACATGAAGGAGGCGGAAGCA
    CCGGAGGAGGCTTGGAGGGGAGTCAACAACAAGGCTACGGAGAAGACCTTCCTCAAGATTAAGAACCTGAAGGAGGCAGA
    GACGTACGTCTTCCGTGTGCGTGCCCAAAACCAAGCCGGTGTTGGTAAAACCTCCGAGGCCACAGAGCCAGTATCAGCTG
    TGACAAAACCAGGCACCAAGGAAATAGTGGTGGACGTGGACGACGACGGCGTCATCTCTCTCAACTTTGAGTGCTGTGAC
    CTGACCCCTGCGTCCAAGTTTGTGTGGTCCAAAAACTACGAAGACATAACAGACTCGTCCCGGCTGGCCGTCGAGACCAA
    AGGAAACAAGTCCAAAGCTGTTTTCAGCGGTCTGGAGGAGGAGGACATCGGCATTTACTCCTGCTTTGTCACCCACACCG
    ACGGAGCTTCGTCCAGCTTCACGCTCTCTGAGGAAGAGCTGAAGAGGCTGCAGAAGCTCAGTCACGACCACAAGTTTCCC
    GTTATTCCACTGAAGTCAGATTTGGCCGTGGAGCTGCTGGAGAAGGGCAGAGTTCGCTTTTGGCTGCAGGCAGACAAGAT
    TTCAGCCAATGGCAAAGTCGATTACGTGTTCAATGAGAGCTCTCTCTCTCAGGGGGAGAAGTACAAGATGAACTTTGACA
    AGAACACTGGTGTGATCGAGCTGATTATGGAGTCTCTGACCCCAGCAGACGAGGGCACCTACACCTTCCAGATGCAGGAT
    GGGAAAGCCACCAACCAGTCCAGTTTGGTTCTGATCGGCGACGTTTTCAAGGAGCTGCAGAAAGAATCAGAGTTCCAGAG
    AAAGGAATGGTTCAGGAAGCAGGGTCCTCATTTTATTGAGTATCTGGATTATGAGGTGACGCCAGAATGTTGCGTTGTGC
    TCAAATGCAAGGTAGGAAATATTAAGAAGGAAACCTCAGCACAGTGGTACAAAGACGGCGAGCAAATCAAAGCTGACGAA
    CACCTCAGCTTCACAGAGGGCGTGCTGAAACTGGAAATTGCTCAGATTTCCAAGAAGGACGCCGGAGTTTATGAGGTGGT
    TCTGAAGGATGACAGAGGAAAGGACACGTCCACGTTGAACCTGAAGGATCAGGGTTTCAAAGACTTGATGAACGAAGTGT
    TCAGTTTTATCGCCAACTCCTCCACGCCGCTGAAGATCACCAGCACGGATCAGGGCATCAGGCTCTACACGTTTGTCAGT
    TACTATAACGACCTGCTGCAGATCACATGGCACTACAAGAACACGGCCATCGCCTTCTCTGACCGCATCAAGAGCGGCGT
    GGTGGGGGAGCAGATATTCCTGCAGATCTCCGAGCCCACAGAGAAGGATATGGGAGAGTACGCCATCGAGTTCTACGACG
    GGAAAGGCGGCGTGAGGAGGAGCGTAGAGCTGTCGGGTCAAGCCTTTGAGGACGCTTTTGCAGAATTCCAGAGACTCAAC
    ATCAGAGCTGCTGCAATCGCAGAGAGAGGTCGCGCTCGAGTAGCCGGCGGTCTGCCTGACGTGGTCACCATACAGGAGGG
    GAAGGCTCTCAGTCTCACCTGCAACATTTCGGGTGACCCCGTGCCAGAGGTCACCTGGCTGAAGAATGACAAAGAGATCA
    CAACAGACCACATCATCCTCAAGTTCGAGTCGGGCAAGTTCGCCAACTTCTTCGTCACTGGCGTGGACACGTCCGACAGT
    GGCAGGTACAGCATCCTGGTGAAGAACAAGTACGGCACGGAGAGCGGGGACTTCACCGTAAGTGTCTTCATCCCGGACGA
    G
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou E.Sarropoulou
    CLICK IMAGES
    FOR LARGER SIZE